RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 GPR17Q13304 367 aa20.61■□□□□ 0.89
SYNE4-202ENST00000340477 CAMK4Q16566 473 aa20.61■□□□□ 0.89
SYNE4-202ENST00000340477 CENPPQ6IPU0 288 aa20.61■□□□□ 0.89
SYNE4-202ENST00000340477 DCP1BQ8IZD4 617 aaKnown RBP20.61■□□□□ 0.89
SYNE4-202ENST00000340477 ADGRF2Q8IZF7 708 aa20.61■□□□□ 0.89
SYNE4-202ENST00000340477 PDCL2Q8N4E4 241 aa20.61■□□□□ 0.89
SYNE4-202ENST00000340477 TRIML1Q8N9V2 468 aa20.61■□□□□ 0.89
SYNE4-202ENST00000340477 CXorf38Q8TB03 319 aa20.61■□□□□ 0.89
SYNE4-202ENST00000340477 ZNF707Q96C28 371 aaPredicted RBP20.61■□□□□ 0.89
SYNE4-202ENST00000340477 BORCS6Q96GS4 357 aa20.61■□□□□ 0.89
SYNE4-202ENST00000340477 MKNK1Q9BUB5 465 aa20.61■□□□□ 0.89
SYNE4-202ENST00000340477 WDR6Q9NNW5 1121 aaKnown RBP20.61■□□□□ 0.89
SYNE4-202ENST00000340477 USTQ9Y2C2 406 aa20.61■□□□□ 0.89
SYNE4-202ENST00000340477 INSL5Q9Y5Q6 135 aa20.61■□□□□ 0.89
SYNE4-202ENST00000340477 BICDL2A1A5D9 508 aa20.6■□□□□ 0.89
SYNE4-202ENST00000340477 IKBKBO14920 756 aa20.6■□□□□ 0.89
SYNE4-202ENST00000340477 AKAP3O75969 853 aa20.6■□□□□ 0.89
SYNE4-202ENST00000340477 OR4Q2P0C623 313 aa20.6■□□□□ 0.89
SYNE4-202ENST00000340477 LHX1P48742 406 aa20.6■□□□□ 0.89
SYNE4-202ENST00000340477 CLDN10P78369 228 aa20.6■□□□□ 0.89
SYNE4-202ENST00000340477 FKBP3Q00688 224 aaKnown RBP20.6■□□□□ 0.89
SYNE4-202ENST00000340477 RNF19BQ6ZMZ0 732 aa20.6■□□□□ 0.89
SYNE4-202ENST00000340477 DPH6Q7L8W6 267 aa20.6■□□□□ 0.89
SYNE4-202ENST00000340477 PLCD3Q8N3E9 789 aa20.6■□□□□ 0.89
SYNE4-202ENST00000340477 C2orf15Q8WU43 125 aaKnown RBP20.6■□□□□ 0.89
SYNE4-202ENST00000340477 PGLYRP2Q96PD5 576 aa20.6■□□□□ 0.89
SYNE4-202ENST00000340477 MMS19Q96T76 1030 aa20.6■□□□□ 0.89
SYNE4-202ENST00000340477 L1RE1Q9UN81 338 aa20.6■□□□□ 0.89
SYNE4-202ENST00000340477 SLC16A3O15427 465 aaKnown RBP20.59■□□□□ 0.89
SYNE4-202ENST00000340477 STX10O60499 249 aa20.59■□□□□ 0.89
SYNE4-202ENST00000340477 P4HA1P13674 534 aa20.59■□□□□ 0.89
SYNE4-202ENST00000340477 CCNE1P24864 410 aa20.59■□□□□ 0.89
SYNE4-202ENST00000340477 PCSK1P29120 753 aa20.59■□□□□ 0.89
SYNE4-202ENST00000340477 MORC3Q14149 939 aa20.59■□□□□ 0.89
SYNE4-202ENST00000340477 ZNF699Q32M78 642 aa20.59■□□□□ 0.89
SYNE4-202ENST00000340477 SLC39A12Q504Y0 691 aa20.59■□□□□ 0.89
SYNE4-202ENST00000340477 IQCEQ6IPM2 695 aa20.59■□□□□ 0.89
SYNE4-202ENST00000340477 KLHL10Q6JEL2 608 aa20.59■□□□□ 0.89
SYNE4-202ENST00000340477 OR10T2Q8NGX3 314 aa20.59■□□□□ 0.89
SYNE4-202ENST00000340477 IMPG2Q9BZV3 1241 aa20.59■□□□□ 0.89
SYNE4-202ENST00000340477 ZCWPW1Q9H0M4 648 aa20.59■□□□□ 0.89
SYNE4-202ENST00000340477 CLSTN2Q9H4D0 955 aa20.59■□□□□ 0.89
SYNE4-202ENST00000340477 DDX43Q9NXZ2 648 aaKnown RBP20.59■□□□□ 0.89
SYNE4-202ENST00000340477 KIAA1468Q9P260 1216 aa20.59■□□□□ 0.89
SYNE4-202ENST00000340477 C5orf42Q9H799 3197 aa20.58■□□□□ 0.89
SYNE4-202ENST00000340477 STAU1O95793 577 aaKnown RBP20.58■□□□□ 0.89
SYNE4-202ENST00000340477 GBP2P32456 591 aaPredicted RBP20.58■□□□□ 0.89
SYNE4-202ENST00000340477 PIK3CAP42336 1068 aa20.58■□□□□ 0.89
SYNE4-202ENST00000340477 ALDH1A3P47895 512 aa20.58■□□□□ 0.89
SYNE4-202ENST00000340477 NCOA4Q13772 614 aa20.58■□□□□ 0.89
SYNE4-202ENST00000340477 NFE2Q16621 373 aaPredicted RBP20.58■□□□□ 0.89
SYNE4-202ENST00000340477 WDR72Q3MJ13 1102 aa20.58■□□□□ 0.89
SYNE4-202ENST00000340477 TDRD10Q5VZ19 366 aaKnown RBP20.58■□□□□ 0.89
SYNE4-202ENST00000340477 GRASPQ7Z6J2 395 aaPredicted RBP20.58■□□□□ 0.89
SYNE4-202ENST00000340477 CCDC150Q8NCX0 1101 aa20.58■□□□□ 0.89
SYNE4-202ENST00000340477 PLEKHO2Q8TD55 490 aa20.58■□□□□ 0.89
SYNE4-202ENST00000340477 ZNF516Q92618 1163 aa20.58■□□□□ 0.89
SYNE4-202ENST00000340477 GZF1Q9H116 711 aaPredicted RBP20.58■□□□□ 0.89
SYNE4-202ENST00000340477 NUP62CLQ9H1M0 184 aa20.58■□□□□ 0.89
SYNE4-202ENST00000340477 YIPF1Q9Y548 306 aa20.58■□□□□ 0.89
SYNE4-202ENST00000340477 MTMR11A4FU01 709 aa20.57■□□□□ 0.88
SYNE4-202ENST00000340477 C2CD4DB7Z1M9 353 aa20.57■□□□□ 0.88
SYNE4-202ENST00000340477 ALADP13716 330 aa20.57■□□□□ 0.88
SYNE4-202ENST00000340477 FSHRP23945 695 aa20.57■□□□□ 0.88
SYNE4-202ENST00000340477 EPHB3P54753 998 aa20.57■□□□□ 0.88
SYNE4-202ENST00000340477 MYL6P60660 151 aa20.57■□□□□ 0.88
SYNE4-202ENST00000340477 DLG4P78352 724 aa20.57■□□□□ 0.88
SYNE4-202ENST00000340477 TWF1Q12792 350 aa20.57■□□□□ 0.88
SYNE4-202ENST00000340477 PABPC1LQ4VXU2 614 aaKnown RBP20.57■□□□□ 0.88
SYNE4-202ENST00000340477 ZNF667Q5HYK9 610 aa20.57■□□□□ 0.88
SYNE4-202ENST00000340477 ANKRD40Q6AI12 368 aa20.57■□□□□ 0.88
SYNE4-202ENST00000340477 GET4Q7L5D6 327 aaPredicted RBP20.57■□□□□ 0.88
SYNE4-202ENST00000340477 RNF135Q8IUD6 432 aa20.57■□□□□ 0.88
SYNE4-202ENST00000340477 SPPL2BQ8TCT7 592 aa20.57■□□□□ 0.88
SYNE4-202ENST00000340477 NELFBQ8WX92 580 aa20.57■□□□□ 0.88
SYNE4-202ENST00000340477 TAF4BQ92750 862 aa20.57■□□□□ 0.88
SYNE4-202ENST00000340477 ZNF512Q96ME7 567 aaPredicted RBP20.57■□□□□ 0.88
SYNE4-202ENST00000340477 ACBD6Q9BR61 282 aa20.57■□□□□ 0.88
SYNE4-202ENST00000340477 SNX25Q9H3E2 840 aa20.57■□□□□ 0.88
SYNE4-202ENST00000340477 CD320Q9NPF0 282 aa20.57■□□□□ 0.88
SYNE4-202ENST00000340477 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.57■□□□□ 0.88
SYNE4-202ENST00000340477 HSFX1Q9UBD0 423 aa20.57■□□□□ 0.88
SYNE4-202ENST00000340477 NXF1Q9UBU9 619 aaKnown RBP20.57■□□□□ 0.88
SYNE4-202ENST00000340477 CTNND2Q9UQB3 1225 aa20.57■□□□□ 0.88
SYNE4-202ENST00000340477 TRIM49BA6NDI0 452 aa20.56■□□□□ 0.88
SYNE4-202ENST00000340477 SEC24AO95486 1093 aa20.56■□□□□ 0.88
SYNE4-202ENST00000340477 CST3P01034 146 aaPredicted RBP20.56■□□□□ 0.88
SYNE4-202ENST00000340477 C4BPAP04003 597 aaKnown RBP20.56■□□□□ 0.88
SYNE4-202ENST00000340477 TRIM49P0CI25 452 aa20.56■□□□□ 0.88
SYNE4-202ENST00000340477 TRIM49CP0CI26 452 aa20.56■□□□□ 0.88
SYNE4-202ENST00000340477 PTPN2P17706 415 aa20.56■□□□□ 0.88
SYNE4-202ENST00000340477 TUFMP49411 452 aaKnown RBP20.56■□□□□ 0.88
SYNE4-202ENST00000340477 DUSP4Q13115 394 aa20.56■□□□□ 0.88
SYNE4-202ENST00000340477 PAK1Q13153 545 aa20.56■□□□□ 0.88
SYNE4-202ENST00000340477 SOWAHAQ2M3V2 549 aa20.56■□□□□ 0.88
SYNE4-202ENST00000340477 ZACNQ401N2 412 aa20.56■□□□□ 0.88
SYNE4-202ENST00000340477 TCERG1LQ5VWI1 586 aa20.56■□□□□ 0.88
SYNE4-202ENST00000340477 ZDHHC14Q8IZN3 488 aa20.56■□□□□ 0.88
SYNE4-202ENST00000340477 TMEM209Q96SK2 561 aa20.56■□□□□ 0.88
SYNE4-202ENST00000340477 SEPT5Q99719 369 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms