RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 TMEM35BQ8NCS4 154 aa23.83■■□□□ 1.41
PDLIM2-203ENST00000339162 CD99L2Q8TCZ2 262 aa23.83■■□□□ 1.41
PDLIM2-203ENST00000339162 PYGMP11217 842 aa23.83■■□□□ 1.4
PDLIM2-203ENST00000339162 P4HA1P13674 534 aa23.83■■□□□ 1.4
PDLIM2-203ENST00000339162 MRPS6P82932 125 aaKnown RBP23.83■■□□□ 1.4
PDLIM2-203ENST00000339162 ZBTB6Q15916 424 aa23.83■■□□□ 1.4
PDLIM2-203ENST00000339162 CYP4A22Q5TCH4 519 aa23.83■■□□□ 1.4
PDLIM2-203ENST00000339162 TWF2Q6IBS0 349 aaKnown RBP23.83■■□□□ 1.4
PDLIM2-203ENST00000339162 VCPIP1Q96JH7 1222 aa23.83■■□□□ 1.4
PDLIM2-203ENST00000339162 HEXIM1O94992 359 aaKnown RBP23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 MCM3P25205 808 aa23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 CTNNA1P35221 906 aaKnown RBP23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 RPL7AP62424 266 aaKnown RBP23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 PLEKHA7Q6IQ23 1121 aa23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 SESTD1Q86VW0 696 aa23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 TMEM176AQ96HP8 235 aa23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 ZMYND15Q9H091 742 aa23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 TJP2Q9UDY2 1190 aa23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 CYTH4Q9UIA0 394 aa23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 PCDHGC3Q9UN70 934 aa23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 IPPQ9Y573 584 aa23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 SNX9Q9Y5X1 595 aa23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 SCN10AQ9Y5Y9 1956 aa23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 LSM8O95777 96 aaKnown RBP23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 NDST1P52848 882 aa23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 GUCY2DQ02846 1103 aa23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 PTPN11Q06124 597 aaPredicted RBP23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 NFX1Q12986 1120 aaKnown RBP23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 TRADDQ15628 312 aa23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 ARRDC4Q8NCT1 418 aa23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 OGFRQ9NZT2 677 aa23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 CNTN3Q9P232 1028 aa23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 TTC7AQ9ULT0 858 aaPredicted RBP23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 PCDHA3Q9Y5H8 950 aa23.82■■□□□ 1.4
PDLIM2-203ENST00000339162 SMIM28A0A1B0GU29 152 aa23.81■■□□□ 1.4
PDLIM2-203ENST00000339162 TLR3O15455 904 aaKnown RBP23.81■■□□□ 1.4
PDLIM2-203ENST00000339162 SART1O43290 800 aaKnown RBP23.81■■□□□ 1.4
PDLIM2-203ENST00000339162 MYO1EQ12965 1108 aa23.81■■□□□ 1.4
PDLIM2-203ENST00000339162 GLE1Q53GS7 698 aaKnown RBP23.81■■□□□ 1.4
PDLIM2-203ENST00000339162 SMG8Q8ND04 991 aaKnown RBP23.81■■□□□ 1.4
PDLIM2-203ENST00000339162 HEXIM2Q96MH2 286 aaKnown RBP23.81■■□□□ 1.4
PDLIM2-203ENST00000339162 CYP3A43Q9HB55 503 aa23.81■■□□□ 1.4
PDLIM2-203ENST00000339162 GOLGA2P5Q9HBQ8 144 aa23.81■■□□□ 1.4
PDLIM2-203ENST00000339162 EPB41L5Q9HCM4 733 aa23.81■■□□□ 1.4
PDLIM2-203ENST00000339162 ERVK-5Q9HDB9 667 aa23.81■■□□□ 1.4
PDLIM2-203ENST00000339162 SCN1AP35498 2009 aa23.81■■□□□ 1.4
PDLIM2-203ENST00000339162 M0QZ92 97 aa23.8■■□□□ 1.4
PDLIM2-203ENST00000339162 PAEPP09466 180 aa23.8■■□□□ 1.4
PDLIM2-203ENST00000339162 ERICH1Q86X53 443 aa23.8■■□□□ 1.4
PDLIM2-203ENST00000339162 BEST2Q8NFU1 509 aa23.8■■□□□ 1.4
PDLIM2-203ENST00000339162 OSBPL7Q9BZF2 842 aa23.8■■□□□ 1.4
PDLIM2-203ENST00000339162 MRPL47Q9HD33 250 aaKnown RBP23.8■■□□□ 1.4
PDLIM2-203ENST00000339162 PARVAQ9NVD7 372 aa23.8■■□□□ 1.4
PDLIM2-203ENST00000339162 AMACRQ9UHK6 382 aa23.8■■□□□ 1.4
PDLIM2-203ENST00000339162 DERAQ9Y315 318 aa23.8■■□□□ 1.4
PDLIM2-203ENST00000339162 GRIN2DO15399 1336 aa23.8■■□□□ 1.4
PDLIM2-203ENST00000339162 CCDC66A2RUB6 948 aa23.8■■□□□ 1.4
PDLIM2-203ENST00000339162 O00370 1275 aa23.8■■□□□ 1.4
PDLIM2-203ENST00000339162 CHRNA1P02708 482 aa23.8■■□□□ 1.4
PDLIM2-203ENST00000339162 BARX2Q9UMQ3 279 aaPredicted RBP23.8■■□□□ 1.4
PDLIM2-203ENST00000339162 USTQ9Y2C2 406 aa23.8■■□□□ 1.4
PDLIM2-203ENST00000339162 CEP83Q9Y592 693 aa23.8■■□□□ 1.4
PDLIM2-203ENST00000339162 PLA2G4AP47712 749 aa23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 FAXDC2Q96IV6 333 aa23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 MRPL45Q9BRJ2 306 aaKnown RBP23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 FAM53CQ9NYF3 392 aa23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 SCINQ9Y6U3 715 aa23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 MEIS3P2A8K0S8 358 aa23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 MED7O43513 233 aa23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 CTNNA2P26232 953 aa23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 CDH5P33151 784 aaPredicted RBP23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 TNNT3P45378 269 aaPredicted RBP23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 PTPN20Q4JDL3 420 aa23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 C9orf57Q5W0N0 161 aa23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 SERINC5Q86VE9 423 aa23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 C12orf29Q8N999 325 aa23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 FEZF2Q8TBJ5 459 aa23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 IFT81Q8WYA0 676 aa23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 ZNF518BQ9C0D4 1074 aa23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 SRRDQ9UH36 339 aa23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 ST3GAL5Q9UNP4 418 aa23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 TRPV2Q9Y5S1 764 aa23.79■■□□□ 1.4
PDLIM2-203ENST00000339162 TCRBV7S2A1N4TA0A589 114 aa23.78■■□□□ 1.4
PDLIM2-203ENST00000339162 CCDC188H7C350 402 aa23.78■■□□□ 1.4
PDLIM2-203ENST00000339162 RPS6KA5O75582 802 aa23.78■■□□□ 1.4
PDLIM2-203ENST00000339162 PROSCO94903 275 aa23.78■■□□□ 1.4
PDLIM2-203ENST00000339162 STAU1O95793 577 aaKnown RBP23.78■■□□□ 1.4
PDLIM2-203ENST00000339162 CALB1P05937 261 aa23.78■■□□□ 1.4
PDLIM2-203ENST00000339162 RWDD2BP57060 319 aa23.78■■□□□ 1.4
PDLIM2-203ENST00000339162 SOX4Q06945 474 aaPredicted RBP23.78■■□□□ 1.4
PDLIM2-203ENST00000339162 CASP8Q14790 479 aa23.78■■□□□ 1.4
PDLIM2-203ENST00000339162 HDXQ7Z353 690 aa23.78■■□□□ 1.4
PDLIM2-203ENST00000339162 ZDHHC14Q8IZN3 488 aa23.78■■□□□ 1.4
PDLIM2-203ENST00000339162 KLHDC9Q8NEP7 349 aa23.78■■□□□ 1.4
PDLIM2-203ENST00000339162 MCEEQ96PE7 176 aa23.78■■□□□ 1.4
PDLIM2-203ENST00000339162 MAP2K7O14733 419 aa23.78■■□□□ 1.4
PDLIM2-203ENST00000339162 MICAL2O94851 1124 aa23.78■■□□□ 1.4
PDLIM2-203ENST00000339162 CARSP49589 748 aaKnown RBP23.78■■□□□ 1.4
PDLIM2-203ENST00000339162 INCA1Q0VD86 236 aa23.78■■□□□ 1.4
PDLIM2-203ENST00000339162 SEL1L2Q5TEA6 688 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms