RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 TTC3P53804 2025 aa15.72■□□□□ 0.11
CDK5RAP3-201ENST00000338399 FANCGO15287 622 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 INPPL1O15357 1258 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 BUB1O43683 1085 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 MOCS3O95396 460 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 PAEPP09466 180 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 RPL9P32969 192 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 PASD1Q8IV76 773 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 C3orf58Q8NDZ4 430 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 CYFIP2Q96F07 1278 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 ELAC1Q9H777 363 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 PRDM5Q9NQX1 630 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 MYO1AQ9UBC5 1043 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 MICAL3Q7RTP6 2002 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 ATP8B3O60423 1300 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 HUS1O60921 280 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 CYP1A1P04798 512 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 UNGP13051 313 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 EN2P19622 333 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 NAP1L1P55209 391 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 TUSC3Q13454 348 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 UPP1Q16831 310 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 NOMO2Q5JPE7 1267 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 ACAD10Q6JQN1 1059 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 APPL2Q8NEU8 664 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 OR6B3Q8NGW1 331 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 KIF18AQ8NI77 898 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 CPA5Q8WXQ8 436 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 NT5C1AQ9BXI3 368 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 THAP2Q9H0W7 228 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 LRFN2Q9ULH4 789 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 L1RE1Q9UN81 338 aa15.71■□□□□ 0.11
CDK5RAP3-201ENST00000338399 MKI67P46013 3256 aaKnown RBP15.71■□□□□ 0.1
CDK5RAP3-201ENST00000338399 ANKRD62A6NC57 917 aa15.7■□□□□ 0.1
CDK5RAP3-201ENST00000338399 TRIM43BA6NCK2 446 aa15.7■□□□□ 0.1
CDK5RAP3-201ENST00000338399 TMEM253P0C7T8 217 aa15.7■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CASQ1P31415 396 aa15.7■□□□□ 0.1
CDK5RAP3-201ENST00000338399 NAA35Q5VZE5 725 aa15.7■□□□□ 0.1
CDK5RAP3-201ENST00000338399 TRIM72Q6ZMU5 477 aa15.7■□□□□ 0.1
CDK5RAP3-201ENST00000338399 FAM43BQ6ZT52 329 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-201ENST00000338399 URGCPQ8TCY9 931 aa15.7■□□□□ 0.1
CDK5RAP3-201ENST00000338399 KBTBD7Q8WVZ9 684 aa15.7■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CTNNBL1Q8WYA6 563 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-201ENST00000338399 TRIM43Q96BQ3 446 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-201ENST00000338399 HEXIM2Q96MH2 286 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP3-201ENST00000338399 NME7Q9Y5B8 376 aa15.7■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CAPN6Q9Y6Q1 641 aa15.7■□□□□ 0.1
CDK5RAP3-201ENST00000338399 BTNL10A8MVZ5 291 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CYB561D2O14569 222 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 TACC1O75410 805 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 ITGB8P26012 769 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 LIMS2Q7Z4I7 341 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 ZNF280BQ86YH2 543 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 RNF10Q8N5U6 811 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 TOP6BLQ8N6T0 577 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 ARHGEF26Q96DR7 871 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 DDX27Q96GQ7 796 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 SENP8Q96LD8 212 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 A8MXQ7 604 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 MED7O43513 233 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 HCRTO43612 131 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 DDHD2O94830 711 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 TIMP1P01033 207 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 VDRP11473 427 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 NOP2P46087 812 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 GATMP50440 423 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 NOMO3P69849 1222 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 PAN2Q504Q3 1202 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CNKSR3Q6P9H4 555 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 DSTYKQ6XUX3 929 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 DPH6Q7L8W6 267 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 ACOT1Q86TX2 421 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 ABI1Q8IZP0 508 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 PDCL2Q8N4E4 241 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 VWCEQ96DN2 955 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 UROC1Q96N76 676 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 NOX5Q96PH1 765 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 SNX25Q9H3E2 840 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 TBC1D13Q9NVG8 400 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 KANSL3Q9P2N6 904 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 PCDHGC3Q9UN70 934 aa15.69■□□□□ 0.1
CDK5RAP3-201ENST00000338399 B4GALT3O60512 393 aa15.68■□□□□ 0.1
CDK5RAP3-201ENST00000338399 B3GAT3O94766 335 aa15.68■□□□□ 0.1
CDK5RAP3-201ENST00000338399 PDGFRBP09619 1106 aa15.68■□□□□ 0.1
CDK5RAP3-201ENST00000338399 LMO2P25791 158 aa15.68■□□□□ 0.1
CDK5RAP3-201ENST00000338399 RFC2P35250 354 aa15.68■□□□□ 0.1
CDK5RAP3-201ENST00000338399 GNL1P36915 607 aaPredicted RBP15.68■□□□□ 0.1
CDK5RAP3-201ENST00000338399 NSFP46459 744 aaKnown RBP15.68■□□□□ 0.1
CDK5RAP3-201ENST00000338399 GPC5P78333 572 aa15.68■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CENPCQ03188 943 aa15.68■□□□□ 0.1
CDK5RAP3-201ENST00000338399 RNASELQ05823 741 aaKnown RBP15.68■□□□□ 0.1
CDK5RAP3-201ENST00000338399 IKBKEQ14164 716 aa15.68■□□□□ 0.1
CDK5RAP3-201ENST00000338399 SGO2Q562F6 1265 aa15.68■□□□□ 0.1
CDK5RAP3-201ENST00000338399 UNC93AQ86WB7 457 aa15.68■□□□□ 0.1
CDK5RAP3-201ENST00000338399 ADGRF2Q8IZF7 708 aa15.68■□□□□ 0.1
CDK5RAP3-201ENST00000338399 HASPINQ8TF76 798 aa15.68■□□□□ 0.1
CDK5RAP3-201ENST00000338399 PCDH10Q9P2E7 1040 aa15.68■□□□□ 0.1
CDK5RAP3-201ENST00000338399 NCANO14594 1321 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms