RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 SLC8A2Q9UPR5 921 aa14.39□□□□□ -0.11
RTN4-202ENST00000337526 SREBF1P36956 1147 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 HADHAP40939 763 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 CUL2Q13617 745 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 CYP4A22Q5TCH4 519 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 ATF7IP2Q5U623 682 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 RMDN1Q96DB5 314 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 TAAR1Q96RJ0 339 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 TRIM62Q9BVG3 475 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 TASP1Q9H6P5 420 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 PHTF1Q9UMS5 762 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 SALL1Q9NSC2 1324 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 ZC3H13Q5T200 1668 aaKnown RBP14.38□□□□□ -0.11
RTN4-202ENST00000337526 A0A087X0B3 334 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 C19orf81C9J6K1 198 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 ADCY3O60266 1144 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 RARBP10826 455 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 KCNA2P16389 499 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 NFKBIAP25963 317 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 TARSP26639 723 aaKnown RBP14.38□□□□□ -0.11
RTN4-202ENST00000337526 SCTRP47872 440 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 CTCFP49711 727 aaPredicted RBP14.38□□□□□ -0.11
RTN4-202ENST00000337526 NFIAQ12857 509 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 BOLA3Q53S33 107 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 RBM46Q8TBY0 533 aaKnown RBP14.38□□□□□ -0.11
RTN4-202ENST00000337526 EME1Q96AY2 570 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 TLR10Q9BXR5 811 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 MRPL1Q9BYD6 325 aaKnown RBP14.38□□□□□ -0.11
RTN4-202ENST00000337526 CDC42EP4Q9H3Q1 356 aaKnown RBP14.38□□□□□ -0.11
RTN4-202ENST00000337526 A0A0A6YYK5 440 aaPredicted RBP14.38□□□□□ -0.11
RTN4-202ENST00000337526 POLBP06746 335 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 GPD1P21695 349 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 RECQLP46063 649 aaPredicted RBP14.38□□□□□ -0.11
RTN4-202ENST00000337526 INTS5Q6P9B9 1019 aaKnown RBP14.38□□□□□ -0.11
RTN4-202ENST00000337526 SLC30A9Q6PML9 568 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 ZNF720Q7Z2F6 126 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 LRRC71Q8N4P6 559 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 APPL2Q8NEU8 664 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 UBA3Q8TBC4 463 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 PTPRN2Q92932 1015 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 FRMD8Q9BZ67 464 aaPredicted RBP14.38□□□□□ -0.11
RTN4-202ENST00000337526 RIOX1Q9H6W3 641 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 SLC13A4Q9UKG4 626 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 ANGPT2O15123 496 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 ZNF235Q14590 738 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 TRADDQ15628 312 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 TTC39BQ5VTQ0 682 aaPredicted RBP14.38□□□□□ -0.11
RTN4-202ENST00000337526 XRRA1Q6P2D8 792 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 FAM111AQ96PZ2 611 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 DUSP9Q99956 384 aaKnown RBP14.38□□□□□ -0.11
RTN4-202ENST00000337526 TMEM39BQ9GZU3 492 aa14.38□□□□□ -0.11
RTN4-202ENST00000337526 LRRC10BA6NIK2 292 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 ITGA4P13612 1032 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 RRM1P23921 792 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 MRPS35P82673 323 aaKnown RBP14.37□□□□□ -0.11
RTN4-202ENST00000337526 CHI3L2Q15782 390 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 EIF2AQ9BY44 585 aaKnown RBP14.37□□□□□ -0.11
RTN4-202ENST00000337526 KCNA1Q09470 495 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 PRPF39Q86UA1 669 aaKnown RBP14.37□□□□□ -0.11
RTN4-202ENST00000337526 RNF217Q8TC41 542 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 ASAP3Q8TDY4 903 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 PBXIP1Q96AQ6 731 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 SEMA4AQ9H3S1 761 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.37□□□□□ -0.11
RTN4-202ENST00000337526 WHRNQ9P202 907 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 ADGRB1O14514 1584 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 IQGAP1P46940 1657 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 PSTPIP1O43586 416 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 ITIH4Q14624 930 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 IER5Q5VY09 327 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 EP400NLQ6ZTU2 488 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 CDR2LQ86X02 465 aaPredicted RBP14.37□□□□□ -0.11
RTN4-202ENST00000337526 PPHLN1Q8NEY8 458 aaKnown RBP14.37□□□□□ -0.11
RTN4-202ENST00000337526 RDM1Q8NG50 284 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 METTL5Q9NRN9 209 aaKnown RBP14.37□□□□□ -0.11
RTN4-202ENST00000337526 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.37□□□□□ -0.115e-6■□□□□ 9.7
RTN4-202ENST00000337526 SPATA31A1Q5TZJ5 1347 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 GTPBP10A4D1E9 387 aaKnown RBP14.37□□□□□ -0.11
RTN4-202ENST00000337526 MAGEB2O15479 319 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 SEC24DO94855 1032 aaPredicted RBP14.37□□□□□ -0.11
RTN4-202ENST00000337526 IL18RAPO95256 599 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 ARP10275 920 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 KCNMA1Q12791 1236 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 PDK1Q15118 436 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 POTEAQ6S8J7 498 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 NLRP9Q7RTR0 991 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 ACER1Q8TDN7 264 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 USP33Q8TEY7 942 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 KRT35Q92764 455 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 SH3GL3Q99963 347 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 ASPSCR1Q9BZE9 553 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 DLGAP2Q9P1A6 1054 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 HEY2Q9UBP5 337 aa14.37□□□□□ -0.11
RTN4-202ENST00000337526 hCG_2014768A0A024R1R8 64 aa14.36□□□□□ -0.11
RTN4-202ENST00000337526 E2F8A0AVK6 867 aa14.36□□□□□ -0.11
RTN4-202ENST00000337526 NQO1P15559 274 aaKnown RBP14.36□□□□□ -0.11
RTN4-202ENST00000337526 TKFCQ3LXA3 575 aa14.36□□□□□ -0.11
RTN4-202ENST00000337526 IFNEQ86WN2 208 aa14.36□□□□□ -0.11
RTN4-202ENST00000337526 ATG4CQ96DT6 458 aa14.36□□□□□ -0.11
RTN4-202ENST00000337526 CDY2AQ9Y6F7 541 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms