RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 KRCC1Q9NPI7 259 aaPredicted RBP8.38□□□□□ -1.07
TNPO1-201ENST00000337273 PSTPIP1O43586 416 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 ANXA11P50995 505 aaKnown RBP8.38□□□□□ -1.07
TNPO1-201ENST00000337273 CCDC15Q0P6D6 951 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 NAPEPLDQ6IQ20 393 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 SOX13Q9UN79 622 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 SERPINB3P29508 390 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 YWHABP31946 246 aaKnown RBP8.38□□□□□ -1.07
TNPO1-201ENST00000337273 FMO5P49326 533 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 PTK7Q13308 1070 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 C1orf228Q6PIY5 440 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 FAM180AQ6UWF9 173 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 IL25Q9H293 177 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 CYLDQ9NQC7 956 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 UBA6A0AVT1 1052 aaPredicted RBP8.38□□□□□ -1.07
TNPO1-201ENST00000337273 A8MXQ7 604 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 OPLAHO14841 1288 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 GLRA3O75311 464 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 THRAP10827 490 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 SBK1Q52WX2 424 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 KHDRBS2Q5VWX1 349 aaKnown RBP8.38□□□□□ -1.07
TNPO1-201ENST00000337273 SUGP1Q8IWZ8 645 aaKnown RBP8.38□□□□□ -1.07
TNPO1-201ENST00000337273 OLFM1Q99784 485 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 SH3GL2Q99962 352 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 UNC45AQ9H3U1 944 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 VCPKMTQ9H867 229 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 ZC3H7BQ9UGR2 993 aaKnown RBP8.38□□□□□ -1.07
TNPO1-201ENST00000337273 SLC16A4O15374 487 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 FCGR1AP12314 374 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 TCN1P20061 433 aaPredicted RBP8.38□□□□□ -1.07
TNPO1-201ENST00000337273 HOXA13P31271 388 aaPredicted RBP8.38□□□□□ -1.07
TNPO1-201ENST00000337273 RGS4P49798 205 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 TRPM1Q7Z4N2 1603 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 ADGRF4Q8IZF3 695 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 TRIM63Q969Q1 353 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 CCT7Q99832 543 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 BBS2Q9BXC9 721 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 LZTS3O60299 673 aaPredicted RBP8.38□□□□□ -1.07
TNPO1-201ENST00000337273 EIF2S1P05198 315 aaKnown RBP8.38□□□□□ -1.07
TNPO1-201ENST00000337273 PSMA4P25789 261 aaKnown RBP8.38□□□□□ -1.07
TNPO1-201ENST00000337273 JAMLQ86YT9 394 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 NEDD1Q8NHV4 660 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 USP13Q92995 863 aaPredicted RBP8.38□□□□□ -1.07
TNPO1-201ENST00000337273 CASS4Q9NQ75 786 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 CAB39Q9Y376 341 aaPredicted RBP8.38□□□□□ -1.07
TNPO1-201ENST00000337273 MBD5Q9P267 1494 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 NEMP1O14524 444 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 ADRA2BP18089 450 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 TPI1P60174 286 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 CCDC85BQ15834 202 aaPredicted RBP8.38□□□□□ -1.07
TNPO1-201ENST00000337273 LONRF1Q17RB8 773 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 C3orf62Q6ZUJ4 267 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 EVPLLA8MZ36 301 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 APRTP07741 180 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 MAGEA4P43358 317 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 ZNF235Q14590 738 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 DEPDC1Q5TB30 811 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 PARP8Q8N3A8 854 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 MASTLQ96GX5 879 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 PLA2R1Q13018 1463 aa8.38□□□□□ -1.07
TNPO1-201ENST00000337273 IQGAP3Q86VI3 1631 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 USP17L10C9JJH3 530 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 TRIP10Q15642 601 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 FAM83EQ2M2I3 478 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 FAM196AQ6ZSG2 479 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 NDEL1Q9GZM8 345 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 C20orf96Q9NUD7 363 aaPredicted RBP8.37□□□□□ -1.07
TNPO1-201ENST00000337273 GAS2O43903 313 aaKnown RBP8.37□□□□□ -1.07
TNPO1-201ENST00000337273 ST13P50502 369 aaKnown RBP8.37□□□□□ -1.07
TNPO1-201ENST00000337273 TRAF7Q6Q0C0 670 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 PHF12Q96QT6 1004 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 EFCAB1Q9HAE3 211 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 TMEM8AQ9HCN3 771 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 FXR2P51116 673 aaKnown RBP eCLIP8.37□□□□□ -1.072e-7■■■■□ 22.1
TNPO1-201ENST00000337273 USP17L6PQ6QN14 398 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 OR6P1Q8NGX9 317 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 TASP1Q9H6P5 420 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 GDF11O95390 407 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 ENO3P13929 434 aaPredicted RBP8.37□□□□□ -1.07
TNPO1-201ENST00000337273 EPC2Q52LR7 807 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 SYNE4Q8N205 404 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 WHRNQ9P202 907 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 A0A0A6YYK5 440 aaPredicted RBP8.37□□□□□ -1.07
TNPO1-201ENST00000337273 B2RBV5 119 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 TRAPPC3O43617 180 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 IL18RAPO95256 599 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 CD4P01730 458 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 TTC33Q6PID6 262 aaPredicted RBP8.37□□□□□ -1.07
TNPO1-201ENST00000337273 ACTRT1Q8TDG2 376 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 TMA16Q96EY4 203 aaKnown RBP8.37□□□□□ -1.07
TNPO1-201ENST00000337273 CROCCQ5TZA2 2017 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 FMR1Q06787 632 aaKnown RBP eCLIP8.37□□□□□ -1.072e-6■■□□□ 12.9
TNPO1-201ENST00000337273 TKFCQ3LXA3 575 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 XKR3Q5GH77 459 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 PRPF39Q86UA1 669 aaKnown RBP8.37□□□□□ -1.07
TNPO1-201ENST00000337273 UNKQ9C0B0 810 aaKnown RBP8.37□□□□□ -1.07
TNPO1-201ENST00000337273 RAB6BQ9NRW1 208 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 CNOT7Q9UIV1 285 aaKnown RBP8.37□□□□□ -1.07
TNPO1-201ENST00000337273 RARGP13631 454 aa8.37□□□□□ -1.07
TNPO1-201ENST00000337273 CTCFP49711 727 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms