RNA–Protein interactions for RNA: ENST00000336119.7

NLRP3-201, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 4,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-201ENST00000336119 CPP00450 1065 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 HP1BP3Q5SSJ5 553 aaPredicted RBP9.77□□□□□ -0.85
NLRP3-201ENST00000336119 AADACL2Q6P093 401 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 RSRC1Q96IZ7 334 aaKnown RBP9.77□□□□□ -0.85
NLRP3-201ENST00000336119 DCLK3Q9C098 648 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 KLC2Q9H0B6 622 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 CDC42EP4Q9H3Q1 356 aaKnown RBP9.77□□□□□ -0.85
NLRP3-201ENST00000336119 MROH8Q9H579 483 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 PPCSQ9HAB8 311 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 ZNF536O15090 1300 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 COL2A1P02458 1487 aaPredicted RBP9.77□□□□□ -0.85
NLRP3-201ENST00000336119 SPDYE16A6NNV3 312 aaPredicted RBP9.77□□□□□ -0.85
NLRP3-201ENST00000336119 KCNA2P16389 499 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 UBA1P22314 1058 aaKnown RBP9.77□□□□□ -0.85
NLRP3-201ENST00000336119 MARCKSL1P49006 195 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 HADHBP55084 474 aaKnown RBP9.77□□□□□ -0.85
NLRP3-201ENST00000336119 BCAR1P56945 870 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 EIF3EP60228 445 aaKnown RBP9.77□□□□□ -0.85
NLRP3-201ENST00000336119 COPS2P61201 443 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 RNASELQ05823 741 aaKnown RBP9.77□□□□□ -0.85
NLRP3-201ENST00000336119 SNAPC2Q13487 334 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 PPP6R3Q5H9R7 873 aaPredicted RBP9.77□□□□□ -0.85
NLRP3-201ENST00000336119 ZNF484Q5JVG2 852 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 FOXR1Q6PIV2 292 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 BZW1Q7L1Q6 419 aaKnown RBP9.77□□□□□ -0.85
NLRP3-201ENST00000336119 PALB2Q86YC2 1186 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 RIOX2Q8IUF8 465 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 TRIM42Q8IWZ5 723 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 RIBC1Q8N443 379 aaPredicted RBP9.77□□□□□ -0.85
NLRP3-201ENST00000336119 HELQQ8TDG4 1101 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 CDKL2Q92772 493 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 GRAMD1AQ96CP6 724 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 EFCC1Q9HA90 598 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 SPC25Q9HBM1 224 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 LRRC4Q9HBW1 653 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 FZD1Q9UP38 647 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 ZMYM2Q9UBW7 1377 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 PDGFRAP16234 1089 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 ROR1Q01973 937 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 CDR2LQ86X02 465 aaPredicted RBP9.77□□□□□ -0.85
NLRP3-201ENST00000336119 EPS8L3Q8TE67 593 aaKnown RBP9.77□□□□□ -0.85
NLRP3-201ENST00000336119 PGM2Q96G03 612 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 BORCS6Q96GS4 357 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 TGS1Q96RS0 853 aaKnown RBP9.77□□□□□ -0.85
NLRP3-201ENST00000336119 STXBP5LQ9Y2K9 1186 aa9.77□□□□□ -0.85
NLRP3-201ENST00000336119 A0A1B0GUA9 196 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 TMEM120BA0PK00 339 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 TCP11X1B4DZS4 312 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 CST8O60676 142 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 PGK2P07205 417 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 CLCN3P51790 818 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 CDC42EP1Q00587 391 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 ARMCX2Q7L311 632 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 GPC2Q8N158 579 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 ARHGAP24Q8N264 748 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 NME8Q8N427 588 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 CCDC110Q8TBZ0 833 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 BSNDQ8WZ55 320 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 MCUR1Q96AQ8 359 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 KLRG1Q96E93 195 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 COQ4Q9Y3A0 265 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 SRRM3A6NNA2 597 aaPredicted RBP9.76□□□□□ -0.85
NLRP3-201ENST00000336119 SMAPO00193 183 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 RIPK2O43353 540 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 ZNF862O60290 1169 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 TTC4O95801 387 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 LY6KQ17RY6 165 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 CYP4A22Q5TCH4 519 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 VPS52Q8N1B4 723 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 SGSM3Q96HU1 749 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 LRRC19Q9H756 370 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 GPRC5DQ9NZD1 345 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 ARHGAP28Q9P2N2 729 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 COG5Q9UP83 839 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 HEY1Q9Y5J3 304 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 ACKR2O00590 384 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 FSCN2O14926 492 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 KRT10P13645 584 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 EPHX2P34913 555 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 ENPEPQ07075 957 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 TFDP3Q5H9I0 405 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 TDRD10Q5VZ19 366 aaKnown RBP9.76□□□□□ -0.85
NLRP3-201ENST00000336119 FAM47EQ6ZV65 393 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 GPATCH11Q8N954 259 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 HPDLQ96IR7 371 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 NT5C1AQ9BXI3 368 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 TRABDQ9H4I3 376 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 RSAD1Q9HA92 442 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 TXLNGQ9NUQ3 528 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 SMG5Q9UPR3 1016 aaKnown RBP9.76□□□□□ -0.85
NLRP3-201ENST00000336119 NOD1Q9Y239 953 aa9.76□□□□□ -0.85
NLRP3-201ENST00000336119 SYNJ2BP-COX16A0A087WUM0 186 aa9.75□□□□□ -0.85
NLRP3-201ENST00000336119 KRT37O76014 449 aa9.75□□□□□ -0.85
NLRP3-201ENST00000336119 CFAP157Q5JU67 520 aa9.75□□□□□ -0.85
NLRP3-201ENST00000336119 GPRC5AQ8NFJ5 357 aa9.75□□□□□ -0.85
NLRP3-201ENST00000336119 FRMD8P1Q9BZ68 369 aaPredicted RBP9.75□□□□□ -0.85
NLRP3-201ENST00000336119 COX16Q9P0S2 106 aa9.75□□□□□ -0.85
NLRP3-201ENST00000336119 ITGB3P05106 788 aa9.75□□□□□ -0.85
NLRP3-201ENST00000336119 FAM47CQ5HY64 1035 aa9.75□□□□□ -0.85
NLRP3-201ENST00000336119 SPOCD1Q6ZMY3 1216 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms