RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 GGT7Q9UJ14 662 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 V9GYQ6 96 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 C3orf70A6NLC5 250 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 HUS1O60921 280 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 SKAP2O75563 359 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 FEN1P39748 380 aaKnown RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 CTSWP56202 376 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 ROR2Q01974 943 aaKnown RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 EDRF1Q3B7T1 1238 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 CERKLQ49MI3 558 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 RASGRP2Q7LDG7 609 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 UNC45BQ8IWX7 931 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 XXYLT1Q8NBI6 393 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 ILKAPQ9H0C8 392 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 AMACRQ9UHK6 382 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 SH3GLB1Q9Y371 365 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 SNX13Q9Y5W8 968 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 ZNF608Q9ULD9 1512 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 COL23A1Q86Y22 540 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 DHX40Q8IX18 779 aaKnown RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 RNASE11Q8TAA1 199 aaKnown RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 CHID1Q9BWS9 393 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 XPO7Q9UIA9 1087 aaKnown RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 GRID1Q9ULK0 1009 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 ATP10BO94823 1461 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 SLC16A3O15427 465 aaKnown RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 SSNA1O43805 119 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 ALOX12P18054 663 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 CNTN1Q12860 1018 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 SNX30Q5VWJ9 437 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 S100ZQ8WXG8 99 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 E2F7Q96AV8 911 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 LENG1Q96BZ8 264 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 ATXN7L3BQ96GX2 97 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 TRIP11Q15643 1979 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 NEURL1BA8MQ27 555 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 H0YIN7 160 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 KATNA1O75449 491 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 NPM3O75607 178 aaKnown RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 PRIM2P49643 509 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 CASP4P49662 377 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 MTFR1Q15390 333 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 CHI3L2Q15782 390 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 LONRF1Q17RB8 773 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 CEP170P1Q96L14 293 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 IL1RL2Q9HB29 575 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 COMMD9Q9P000 198 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 CLCA2Q9UQC9 943 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 NEU2Q9Y3R4 380 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 SCN8AQ9UQD0 1980 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 PSMD14O00487 310 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 SH2B2O14492 632 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 TNFRSF21O75509 655 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 GSTT1P30711 240 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 RGS4P49798 205 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 ERFP50548 548 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 CSE1LP55060 971 aaKnown RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 KCNH2Q12809 1159 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 AKAP14Q86UN6 197 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 LRRC47Q8N1G4 583 aaKnown RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 FLAD1Q8NFF5 587 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 GDPD5Q8WTR4 605 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 ZNF594Q96JF6 807 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 SRPK1Q96SB4 655 aaKnown RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 GORASP1Q9BQQ3 440 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 SH3BP4Q9P0V3 963 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 WDR19Q8NEZ3 1342 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 LIN7AO14910 233 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 GNPATO15228 680 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 PRPF3O43395 683 aaKnown RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 RAB25P57735 213 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 GIMAP8Q8ND71 665 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 WDR12Q9GZL7 423 aaKnown RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 TLR7Q9NYK1 1049 aaKnown RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 ZNF624Q9P2J8 865 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 CCNL1Q9UK58 526 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 MEI4A8MW99 385 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 ATP9AO75110 1047 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 MYL12AP19105 171 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 CDH3P22223 829 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 CDH6P55285 790 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 GEMIN4P57678 1058 aaKnown RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 EFHC1Q5JVL4 640 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 DGKKQ5KSL6 1271 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 TUBA3EQ6PEY2 450 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 CCNI2Q6ZMN8 369 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 CACTIN-AS1Q8N1I8 211 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 KYQ8NBH2 561 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 SSH3Q8TE77 659 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 CCDC126Q96EE4 140 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 ASIC4Q96FT7 647 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 DDX50Q9BQ39 737 aaKnown RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 UBE2QL1A1L167 161 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 APRTP07741 180 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 ARPC4P59998 168 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 ZNF235Q14590 738 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 ZSWIM7Q19AV6 140 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 SYTL3Q4VX76 610 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 C4orf22Q6V702 233 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 TCAIMQ8N3R3 496 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms