RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 CUL3Q13618 768 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 CCNG2Q16589 344 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 MAPK6Q16659 721 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 CERKLQ49MI3 558 aaPredicted RBP14.49□□□□□ -0.09
SYNE3-201ENST00000334258 PLEKHG4Q58EX7 1191 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 PADI6Q6TGC4 694 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 DCAF4Q8WV16 495 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 SHC3Q92529 594 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 SEMA4DQ92854 862 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 PCDHGA4Q9Y5G9 962 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 TRAFD1O14545 582 aaPredicted RBP14.48□□□□□ -0.09
SYNE3-201ENST00000334258 TBX10O75333 385 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 MUTP22033 750 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 ARFIP2P53365 341 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 PDIA2Q13087 525 aaKnown RBP14.48□□□□□ -0.09
SYNE3-201ENST00000334258 DGKZQ13574 1117 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 THOC5Q13769 683 aaKnown RBP14.48□□□□□ -0.09
SYNE3-201ENST00000334258 NCAPG2Q86XI2 1143 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 PHC3Q8NDX5 983 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 PLEKHO2Q8TD55 490 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 CCDC17Q96LX7 622 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 WDR18Q9BV38 432 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 FHDC1Q9C0D6 1143 aaPredicted RBP14.48□□□□□ -0.09
SYNE3-201ENST00000334258 TMEM39BQ9GZU3 492 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 FBXO6Q9NRD1 293 aaPredicted RBP14.48□□□□□ -0.09
SYNE3-201ENST00000334258 PIK3CDO00329 1044 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 GSC2O15499 205 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 HNRNPCL1O60812 293 aaKnown RBP14.48□□□□□ -0.09
SYNE3-201ENST00000334258 GSTA2P09210 222 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 CPA2P48052 419 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 OR52E8Q6IFG1 317 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 FAM136AQ96C01 138 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 HAUS1Q96CS2 278 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 NSL1Q96IY1 281 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 TTC25Q96NG3 672 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 ZNF577Q9BSK1 485 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 YIPF2Q9BWQ6 316 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 MAK16Q9BXY0 300 aaKnown RBP14.48□□□□□ -0.09
SYNE3-201ENST00000334258 SYNCQ9H7C4 482 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 BLOC1S6Q9UL45 172 aa14.48□□□□□ -0.09
SYNE3-201ENST00000334258 RPL26L1Q9UNX3 145 aaKnown RBP14.48□□□□□ -0.09
SYNE3-201ENST00000334258 ZBED4O75132 1171 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 PSMG1O95456 288 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 GH2P01242 217 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 ABHD2P08910 425 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 FGFR1P11362 822 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 KRT10P13645 584 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 ETS1P14921 441 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 SSTR3P32745 418 aaPredicted RBP14.47□□□□□ -0.09
SYNE3-201ENST00000334258 NSFP46459 744 aaKnown RBP14.47□□□□□ -0.09
SYNE3-201ENST00000334258 CMPK2Q5EBM0 449 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 STRIP1Q5VSL9 837 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 CCDC174Q6PII3 467 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 CBWD2Q8IUF1 395 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 GLIS1Q8NBF1 620 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 NRG4Q8WWG1 115 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 DDX27Q96GQ7 796 aaKnown RBP14.47□□□□□ -0.09
SYNE3-201ENST00000334258 EURLQ9NYK6 297 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 GJA3Q9Y6H8 435 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 SCN9AQ15858 1988 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 C10orf71Q711Q0 1435 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 MAGEA13PA6NCF6 341 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 BAG2O95816 211 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 SETSIPP0DME0 302 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 GCAP28676 217 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 SERPINB3P29508 390 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 ECE1P42892 770 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 MTHFD1LQ6UB35 978 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 SH3TC2Q8TF17 1288 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 PI4K2AQ9BTU6 479 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 PSMC3IPQ9P2W1 217 aaPredicted RBP14.47□□□□□ -0.09
SYNE3-201ENST00000334258 SUGT1Q9Y2Z0 365 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 TJP3O95049 919 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 SLC1A1P43005 524 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 OCRLQ01968 901 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 C1orf220Q5T0J3 134 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 KRT39Q6A163 491 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 RGS9BPQ6ZS82 235 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 RHOT1Q8IXI2 618 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.47□□□□□ -0.09
SYNE3-201ENST00000334258 WDR60Q8WVS4 1066 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 MAF1Q9H063 256 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 LNPEPQ9UIQ6 1025 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 MAST2Q6P0Q8 1798 aa14.47□□□□□ -0.09
SYNE3-201ENST00000334258 BRCA2P51587 3418 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 BANF1O75531 89 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 PSMD10O75832 226 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 PGM1P36871 562 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 CLEC16AQ2KHT3 1053 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 CENPUQ71F23 418 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 LRRC6Q86X45 466 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 PASD1Q8IV76 773 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 DAW1Q8N136 415 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 TAS1R2Q8TE23 839 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 FAM161BQ96MY7 647 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 C11orf70Q9BRQ4 267 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 MANSC1Q9H8J5 431 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 TOPORSQ9NS56 1045 aaPredicted RBP14.46□□□□□ -0.09
SYNE3-201ENST00000334258 NUMBLQ9Y6R0 609 aa14.46□□□□□ -0.09
SYNE3-201ENST00000334258 CEP350Q5VT06 3117 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms