RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 SLAIN2Q9P270 581 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 NLRP1Q9C000 1473 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 GSAPA4D1B5 854 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 RPS17P08708 135 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 LLGL1Q15334 1064 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 LRRC24Q50LG9 513 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 SFMBT2Q5VUG0 894 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 KDELC1Q6UW63 502 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 SAPCD2Q86UD0 394 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 RELTQ969Z4 430 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 STN1Q9H668 368 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 KANSL1LA0AUZ9 987 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 MAGEA12P43365 314 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 CCT4P50991 539 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZFP69Q49AA0 526 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 SDR16C5Q8N3Y7 309 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 KIAA1143Q96AT1 154 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 COX4I2Q96KJ9 171 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 RNF32Q9H0A6 362 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 GOLPH3LQ9H4A5 285 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 COMMD9Q9P000 198 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 GMNCA6NCL1 334 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 SGCEO43556 437 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 RASGRP1O95267 797 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 NPTX2P47972 431 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 C1orf146Q5VVC0 180 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 NUP54Q7Z3B4 507 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 SPARTQ8N0X7 666 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 CLEC4FQ8N1N0 589 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 ATPAF2Q8N5M1 289 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 EHD4Q9H223 541 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 RIC8AQ9NPQ8 531 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 RRN3Q9NYV6 651 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 TRIM43BA6NCK2 446 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 PSMD9O00233 223 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 GPD2P43304 727 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 RPP38P78345 283 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 GABPAQ06546 454 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 MSANTD1Q6ZTZ1 278 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 CHST3Q7LGC8 479 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 SLC35F3Q8IY50 421 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 PDPRQ8NCN5 879 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 XPO6Q96QU8 1125 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZNF287Q9HBT7 754 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 DNM3Q9UQ16 869 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 PALMO75781 387 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 NMT1P30419 496 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 CYP2C19P33261 490 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 PRIM1P49642 420 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 RESTQ13127 1097 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 UBXN2BQ14CS0 331 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 GSTA3Q16772 222 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 DDR2Q16832 855 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 XKR9Q5GH70 373 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 ESRP1Q6NXG1 681 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 PGAP1Q75T13 922 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 KCNK18Q7Z418 384 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 TTC13Q8NBP0 860 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZNF212Q9UDV6 495 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 POMT1Q9Y6A1 747 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 OR14I1A6ND48 311 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 E2F3O00716 465 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 TBX3O15119 743 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 MYL6BP14649 208 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 CRELD2Q6UXH1 353 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 CRLF3Q8IUI8 442 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 COMMD1Q8N668 190 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 SYT2Q8N9I0 419 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 SAGE1Q9NXZ1 904 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 DMTF1Q9Y222 760 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 SHANK2Q9UPX8 1470 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 MYO1FO00160 1098 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 SSNA1O43805 119 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 NCF4Q15080 339 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 TMEM17Q86X19 198 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 TCEAL4Q96EI5 215 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 BTF3L4Q96K17 158 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 DLGAP2Q9P1A6 1054 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 RWDD2AQ9UIY3 292 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 VANGL2Q9ULK5 521 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 FADS3Q9Y5Q0 445 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 RNF103-CHMP3A0A140T963 221 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 ADAM10O14672 748 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 PER2O15055 1255 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 IL4RP24394 825 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 THOP1P52888 689 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZBTB6Q15916 424 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 IFIT1BQ5T764 474 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 GRHL2Q6ISB3 625 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 REXO1Q8N1G1 1221 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 MAFIPQ8WZ33 124 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 RNPC3Q96LT9 517 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 FRMD6Q96NE9 622 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 KLHL32Q96NJ5 620 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 NLRP3Q96P20 1036 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 A1CFQ9NQ94 594 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 FBXO40Q9UH90 709 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 DOCK8Q8NF50 2099 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 GSTA4O15217 222 aa6.31□□□□□ -1.4
CDC42BPA-201ENST00000334218 MAGEB3O15480 346 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms