RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 CCDC6Q16204 474 aa24.91■■□□□ 1.58
TSKU-201ENST00000333090 EAPPQ56P03 285 aaPredicted RBP24.91■■□□□ 1.58
TSKU-201ENST00000333090 STRIP1Q5VSL9 837 aa24.91■■□□□ 1.58
TSKU-201ENST00000333090 CENPUQ71F23 418 aa24.91■■□□□ 1.58
TSKU-201ENST00000333090 FBXL18Q96ME1 805 aa24.91■■□□□ 1.58
TSKU-201ENST00000333090 C12orf65Q9H3J6 166 aaKnown RBP24.91■■□□□ 1.58
TSKU-201ENST00000333090 SPDYE5A6NIY4 337 aa24.91■■□□□ 1.58
TSKU-201ENST00000333090 ACADSP16219 412 aa24.91■■□□□ 1.58
TSKU-201ENST00000333090 KLC1Q07866 573 aa24.91■■□□□ 1.58
TSKU-201ENST00000333090 MTMR1Q13613 665 aa24.91■■□□□ 1.58
TSKU-201ENST00000333090 EFTUD2Q15029 972 aaKnown RBP eCLIP24.91■■□□□ 1.583e-7■■■■□ 19.8
TSKU-201ENST00000333090 MFSD7Q6UXD7 560 aa24.91■■□□□ 1.58
TSKU-201ENST00000333090 C4orf50Q6ZRC1 276 aa24.91■■□□□ 1.58
TSKU-201ENST00000333090 ALLCQ8N6M5 410 aa24.91■■□□□ 1.58
TSKU-201ENST00000333090 SYT15Q9BQS2 421 aa24.91■■□□□ 1.58
TSKU-201ENST00000333090 TCEAL9Q9UHQ7 104 aa24.91■■□□□ 1.58
TSKU-201ENST00000333090 A0A0G2JND7 137 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 ATP2A1O14983 1001 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 ALOX15BO15296 676 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 LYPLA2O95372 231 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 BPIFB4P59827 614 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 PLCB3Q01970 1234 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 MORF4L2Q15014 288 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 CTC1Q2NKJ3 1217 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 WDR44Q5JSH3 913 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 DSTYKQ6XUX3 929 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 RBBP8NLQ8NC74 664 aaPredicted RBP24.9■■□□□ 1.58
TSKU-201ENST00000333090 RFWD2Q8NHY2 731 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 CADM1Q9BY67 442 aaKnown RBP24.9■■□□□ 1.58
TSKU-201ENST00000333090 ANKFY1Q9P2R3 1169 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 SLC24A2Q9UI40 661 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 LNPEPQ9UIQ6 1025 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 CFAP69A5D8W1 941 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 KRT1P04264 644 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 COL11A2P13942 1736 aaPredicted RBP24.9■■□□□ 1.58
TSKU-201ENST00000333090 C11orf91Q3C1V1 193 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 GNPTABQ3T906 1256 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 GPD1LQ8N335 351 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 BSNDQ8WZ55 320 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 AKT1S1Q96B36 256 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 TIPINQ9BVW5 301 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 TLE6Q9H808 572 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 SAR1AQ9NR31 198 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 NMRK1Q9NWW6 199 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 SYNPO2Q9UMS6 1093 aa24.9■■□□□ 1.58
TSKU-201ENST00000333090 GOLGA8RI6L899 631 aa24.89■■□□□ 1.58
TSKU-201ENST00000333090 NFIBO00712 420 aa24.89■■□□□ 1.58
TSKU-201ENST00000333090 TJP3O95049 919 aa24.89■■□□□ 1.58
TSKU-201ENST00000333090 NOMO3P69849 1222 aa24.89■■□□□ 1.58
TSKU-201ENST00000333090 TMEM154Q6P9G4 183 aa24.89■■□□□ 1.58
TSKU-201ENST00000333090 ZNF516Q92618 1163 aa24.89■■□□□ 1.58
TSKU-201ENST00000333090 ACSF2Q96CM8 615 aaPredicted RBP24.89■■□□□ 1.58
TSKU-201ENST00000333090 SLITRK1Q96PX8 696 aa24.89■■□□□ 1.58
TSKU-201ENST00000333090 TMEM121Q9BTD3 319 aa24.89■■□□□ 1.58
TSKU-201ENST00000333090 ALG13Q9NP73 1137 aaKnown RBP24.89■■□□□ 1.58
TSKU-201ENST00000333090 STOML1Q9UBI4 398 aa24.89■■□□□ 1.58
TSKU-201ENST00000333090 SERPINA10Q9UK55 444 aa24.89■■□□□ 1.58
TSKU-201ENST00000333090 CCPG1Q9ULG6 757 aa24.89■■□□□ 1.58
TSKU-201ENST00000333090 NRXN2Q9P2S2 1712 aa24.89■■□□□ 1.57
TSKU-201ENST00000333090 ZNF536O15090 1300 aa24.89■■□□□ 1.57
TSKU-201ENST00000333090 NVLO15381 856 aaKnown RBP24.89■■□□□ 1.57
TSKU-201ENST00000333090 SMIM24O75264 130 aa24.89■■□□□ 1.57
TSKU-201ENST00000333090 ZWINTO95229 277 aa24.89■■□□□ 1.57
TSKU-201ENST00000333090 LMNAP02545 664 aaKnown RBP24.89■■□□□ 1.57
TSKU-201ENST00000333090 RPL7AP62424 266 aaKnown RBP24.89■■□□□ 1.57
TSKU-201ENST00000333090 SARNPP82979 210 aaKnown RBP24.89■■□□□ 1.57
TSKU-201ENST00000333090 SPDYAQ5MJ70 313 aa24.89■■□□□ 1.57
TSKU-201ENST00000333090 RNASEH2BQ5TBB1 312 aaKnown RBP24.89■■□□□ 1.57
TSKU-201ENST00000333090 TMEM270Q6UE05 265 aa24.89■■□□□ 1.57
TSKU-201ENST00000333090 NLRX1Q86UT6 975 aa24.89■■□□□ 1.57
TSKU-201ENST00000333090 C4orf19Q8IY42 314 aa24.89■■□□□ 1.57
TSKU-201ENST00000333090 BICD1Q96G01 975 aa24.89■■□□□ 1.57
TSKU-201ENST00000333090 KLF6Q99612 283 aaPredicted RBP24.89■■□□□ 1.57
TSKU-201ENST00000333090 SH3GL3Q99963 347 aa24.89■■□□□ 1.57
TSKU-201ENST00000333090 ZC3H11AO75152 810 aaKnown RBP eCLIP24.88■■□□□ 1.57
TSKU-201ENST00000333090 ENTPD3O75355 529 aa24.88■■□□□ 1.57
TSKU-201ENST00000333090 PIK3CAP42336 1068 aa24.88■■□□□ 1.57
TSKU-201ENST00000333090 GEMIN4P57678 1058 aaKnown RBP24.88■■□□□ 1.57
TSKU-201ENST00000333090 BRDTQ58F21 947 aaPredicted RBP24.88■■□□□ 1.57
TSKU-201ENST00000333090 CMPK2Q5EBM0 449 aa24.88■■□□□ 1.57
TSKU-201ENST00000333090 SH3TC2Q8TF17 1288 aa24.88■■□□□ 1.57
TSKU-201ENST00000333090 KANSL3Q9P2N6 904 aa24.88■■□□□ 1.57
TSKU-201ENST00000333090 RPL26L1Q9UNX3 145 aaKnown RBP24.88■■□□□ 1.57
TSKU-201ENST00000333090 SGK1O00141 431 aa24.88■■□□□ 1.57
TSKU-201ENST00000333090 TNNI1P19237 187 aa24.88■■□□□ 1.57
TSKU-201ENST00000333090 SSTR1P30872 391 aa24.88■■□□□ 1.57
TSKU-201ENST00000333090 GPX6P59796 221 aa24.88■■□□□ 1.57
TSKU-201ENST00000333090 MRPS9P82933 396 aaKnown RBP24.88■■□□□ 1.57
TSKU-201ENST00000333090 MTM1Q13496 603 aa24.88■■□□□ 1.57
TSKU-201ENST00000333090 TFDP1Q14186 410 aa24.88■■□□□ 1.57
TSKU-201ENST00000333090 RCN1Q15293 331 aa24.88■■□□□ 1.57
TSKU-201ENST00000333090 PLEKHA7Q6IQ23 1121 aa24.88■■□□□ 1.57
TSKU-201ENST00000333090 RCOR2Q8IZ40 523 aa24.88■■□□□ 1.57
TSKU-201ENST00000333090 RBM41Q96IZ5 413 aaKnown RBP24.88■■□□□ 1.57
TSKU-201ENST00000333090 TSC22D3Q99576 134 aa24.88■■□□□ 1.57
TSKU-201ENST00000333090 SCINQ9Y6U3 715 aa24.88■■□□□ 1.57
TSKU-201ENST00000333090 CCDC22O60826 627 aa24.87■■□□□ 1.57
TSKU-201ENST00000333090 NEFHP12036 1026 aa24.87■■□□□ 1.57
TSKU-201ENST00000333090 GNA15P30679 374 aa24.87■■□□□ 1.57
TSKU-201ENST00000333090 HSD17B4P51659 736 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms