RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 SLC30A10Q6XR72 485 aa19.14■□□□□ 0.65
PKP3-201ENST00000331563 CFAP61Q8NHU2 1237 aa19.14■□□□□ 0.65
PKP3-201ENST00000331563 LENG1Q96BZ8 264 aaPredicted RBP19.14■□□□□ 0.65
PKP3-201ENST00000331563 PPP1R14BQ96C90 147 aa19.14■□□□□ 0.65
PKP3-201ENST00000331563 RBM15Q96T37 977 aaKnown RBP eCLIP19.14■□□□□ 0.655e-6■■□□□ 11.5
PKP3-201ENST00000331563 CYTH2Q99418 400 aa19.14■□□□□ 0.65
PKP3-201ENST00000331563 BARX2Q9UMQ3 279 aaPredicted RBP19.14■□□□□ 0.65
PKP3-201ENST00000331563 MYO3BQ8WXR4 1341 aa19.14■□□□□ 0.65
PKP3-201ENST00000331563 BCRP11274 1271 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 PAX3P23760 479 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 MAP7Q14244 749 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 CATSPER3Q86XQ3 398 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 ARL10Q8N8L6 244 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 C12orf50Q8NA57 414 aaPredicted RBP19.13■□□□□ 0.65
PKP3-201ENST00000331563 RFWD2Q8NHY2 731 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 GRK7Q8WTQ7 553 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 ZNF653Q96CK0 615 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 CLMNQ96JQ2 1002 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 FAM161BQ96MY7 647 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 CCDC28BQ9BUN5 200 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 KIAA1586Q9HCI6 787 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 ANKFY1Q9P2R3 1169 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 HSFX1Q9UBD0 423 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 SMG5Q9UPR3 1016 aaKnown RBP19.13■□□□□ 0.65
PKP3-201ENST00000331563 NUMBLQ9Y6R0 609 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 ITGA2BP08514 1039 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 MUTP22033 750 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 PGM1P36871 562 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 MAGEA4P43358 317 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 DSG1Q02413 1049 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 CYP4A11Q02928 519 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 PLEKHG4Q58EX7 1191 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 NIM1KQ8IY84 436 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 ST13P4Q8IZP2 240 aaPredicted RBP19.13■□□□□ 0.65
PKP3-201ENST00000331563 SYT2Q8N9I0 419 aaPredicted RBP19.13■□□□□ 0.65
PKP3-201ENST00000331563 DENND1AQ8TEH3 1009 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 TTC1Q99614 292 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 FRMD4BQ9Y2L6 1034 aa19.13■□□□□ 0.65
PKP3-201ENST00000331563 ZNF646O15015 1829 aaPredicted RBP19.12■□□□□ 0.65
PKP3-201ENST00000331563 RRM1P23921 792 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 PIK3CAP42336 1068 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 TMED1Q13445 227 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 DGKZQ13574 1117 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 PTK6Q13882 451 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 R3HDM1Q15032 1099 aaKnown RBP19.12■□□□□ 0.65
PKP3-201ENST00000331563 CTC1Q2NKJ3 1217 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 IZUMO3Q5VZ72 239 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 GSTA5Q7RTV2 222 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 RIBC1Q8N443 379 aaPredicted RBP19.12■□□□□ 0.65
PKP3-201ENST00000331563 TUBB6Q9BUF5 446 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 VPS37BQ9H9H4 285 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 SAYSD1Q9NPB0 183 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 hCG_1984214I3L0E3 225 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 ENTPD3O75355 529 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 PLS3P13797 630 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 IVDP26440 423 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 PLOD1Q02809 727 aaPredicted RBP19.12■□□□□ 0.65
PKP3-201ENST00000331563 BTG3Q14201 252 aaPredicted RBP19.12■□□□□ 0.65
PKP3-201ENST00000331563 KIF22Q14807 665 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 ZNF713Q8N859 430 aaPredicted RBP19.12■□□□□ 0.65
PKP3-201ENST00000331563 MORC4Q8TE76 937 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 CFAP57Q96MR6 1250 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 FNBP1Q96RU3 617 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 CORO1BQ9BR76 489 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 BHMT2Q9H2M3 363 aa19.12■□□□□ 0.65
PKP3-201ENST00000331563 ASTN2O75129 1339 aaPredicted RBP19.12■□□□□ 0.65
PKP3-201ENST00000331563 PRPF4O43172 522 aaKnown RBP eCLIP19.11■□□□□ 0.651e-7■□□□□ 8.3
PKP3-201ENST00000331563 FUT4P22083 530 aa19.11■□□□□ 0.65
PKP3-201ENST00000331563 AMPD1P23109 780 aa19.11■□□□□ 0.65
PKP3-201ENST00000331563 RGS9BPQ6ZS82 235 aa19.11■□□□□ 0.65
PKP3-201ENST00000331563 ARHGAP24Q8N264 748 aa19.11■□□□□ 0.65
PKP3-201ENST00000331563 CD101Q93033 1021 aa19.11■□□□□ 0.65
PKP3-201ENST00000331563 OLFM3Q96PB7 478 aa19.11■□□□□ 0.65
PKP3-201ENST00000331563 HEMGNQ9BXL5 484 aa19.11■□□□□ 0.65
PKP3-201ENST00000331563 ALG13Q9NP73 1137 aaKnown RBP19.11■□□□□ 0.65
PKP3-201ENST00000331563 FBXO6Q9NRD1 293 aaPredicted RBP19.11■□□□□ 0.65
PKP3-201ENST00000331563 PIM2Q9P1W9 311 aa19.11■□□□□ 0.65
PKP3-201ENST00000331563 ZNRF3Q9ULT6 936 aa19.11■□□□□ 0.65
PKP3-201ENST00000331563 SH3GLB1Q9Y371 365 aa19.11■□□□□ 0.65
PKP3-201ENST00000331563 ZMYM2Q9UBW7 1377 aa19.11■□□□□ 0.65
PKP3-201ENST00000331563 CPA2P48052 419 aa19.11■□□□□ 0.65
PKP3-201ENST00000331563 CDK7P50613 346 aa19.11■□□□□ 0.65
PKP3-201ENST00000331563 COG2Q14746 738 aa19.11■□□□□ 0.65
PKP3-201ENST00000331563 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.11■□□□□ 0.65
PKP3-201ENST00000331563 SPDYAQ5MJ70 313 aa19.11■□□□□ 0.65
PKP3-201ENST00000331563 ERMNQ8TAM6 284 aa19.11■□□□□ 0.65
PKP3-201ENST00000331563 UNC45AQ9H3U1 944 aa19.11■□□□□ 0.65
PKP3-201ENST00000331563 UMODL1Q5DID0 1318 aa19.11■□□□□ 0.65
PKP3-201ENST00000331563 CNTNAP1P78357 1384 aa19.11■□□□□ 0.65
PKP3-201ENST00000331563 WNT10BO00744 389 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 SUPT3HO75486 399 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 SERPINB3P29508 390 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 NMT1P30419 496 aaKnown RBP19.1■□□□□ 0.65
PKP3-201ENST00000331563 CLK2P49760 499 aaKnown RBP19.1■□□□□ 0.65
PKP3-201ENST00000331563 PHEXP78562 749 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 SULT2A1Q06520 285 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 FRMPD4Q14CM0 1322 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 NCCRP1Q6ZVX7 275 aaPredicted RBP19.1■□□□□ 0.65
PKP3-201ENST00000331563 MYCT1Q8N699 235 aa19.1■□□□□ 0.65
PKP3-201ENST00000331563 AGBL1Q96MI9 1066 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms