RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 PAPOLBQ9NRJ5 636 aaKnown RBP11.03□□□□□ -0.64
CLN8-201ENST00000331222 WWOXQ9NZC7 414 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 USP27XA6NNY8 438 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 EML3Q32P44 896 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 KRT78Q8N1N4 520 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 DEPDC7Q96QD5 511 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 MRPL40Q9NQ50 206 aaKnown RBP11.03□□□□□ -0.64
CLN8-201ENST00000331222 PSD3Q9NYI0 1048 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 NDOR1Q9UHB4 597 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 DIS3Q9Y2L1 958 aaKnown RBP11.03□□□□□ -0.64
CLN8-201ENST00000331222 NLRP1Q9C000 1473 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 SERPINB4P48594 390 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 PRKCEQ02156 737 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 SHROOM1Q2M3G4 852 aaPredicted RBP11.03□□□□□ -0.64
CLN8-201ENST00000331222 MED15Q96RN5 788 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 WDCPQ9H6R7 721 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 CYP4F12Q9HCS2 524 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 ZC3H7BQ9UGR2 993 aaKnown RBP11.03□□□□□ -0.64
CLN8-201ENST00000331222 NARFQ9UHQ1 456 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 CASTOR2A6NHX0 329 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 UBE2Q2LH0YL09 131 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 ZNF500O60304 480 aaPredicted RBP11.03□□□□□ -0.64
CLN8-201ENST00000331222 DAB1O75553 588 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 CPSF4O95639 269 aaKnown RBP11.03□□□□□ -0.64
CLN8-201ENST00000331222 RBP5P82980 135 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 OLFML2BQ68BL8 750 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 RNPC3Q96LT9 517 aaKnown RBP11.03□□□□□ -0.64
CLN8-201ENST00000331222 LIMA1Q9UHB6 759 aaKnown RBP11.03□□□□□ -0.64
CLN8-201ENST00000331222 TFR2Q9UP52 801 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 NFIBO00712 420 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 GRM4Q14833 912 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 GJC2Q5T442 439 aaPredicted RBP11.03□□□□□ -0.64
CLN8-201ENST00000331222 TRABDQ9H4I3 376 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 GPR108Q9NPR9 543 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 STAP2Q9UGK3 403 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 NPC1L1Q9UHC9 1359 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 TPST1O60507 370 aa11.02□□□□□ -0.64
CLN8-201ENST00000331222 MYL4P12829 197 aa11.02□□□□□ -0.64
CLN8-201ENST00000331222 GUCA1AP43080 201 aaPredicted RBP11.02□□□□□ -0.64
CLN8-201ENST00000331222 POU4F1Q01851 419 aa11.02□□□□□ -0.64
CLN8-201ENST00000331222 TP53BP2Q13625 1128 aa11.02□□□□□ -0.64
CLN8-201ENST00000331222 POM121L1PQ3SYA9 428 aa11.02□□□□□ -0.64
CLN8-201ENST00000331222 FAM71DQ8N9W8 422 aa11.02□□□□□ -0.64
CLN8-201ENST00000331222 TAF1DQ9H5J8 278 aaPredicted RBP11.02□□□□□ -0.64
CLN8-201ENST00000331222 RNF112Q9ULX5 631 aa11.02□□□□□ -0.64
CLN8-201ENST00000331222 PQBP1O60828 265 aaKnown RBP11.02□□□□□ -0.64
CLN8-201ENST00000331222 ENO2P09104 434 aaPredicted RBP11.02□□□□□ -0.64
CLN8-201ENST00000331222 CYP2C9P11712 490 aa11.02□□□□□ -0.64
CLN8-201ENST00000331222 KPNA1P52294 538 aaPredicted RBP11.02□□□□□ -0.64
CLN8-201ENST00000331222 STARD3Q14849 445 aa11.02□□□□□ -0.64
CLN8-201ENST00000331222 DENND5BQ6ZUT9 1274 aa11.02□□□□□ -0.64
CLN8-201ENST00000331222 REEP2Q9BRK0 252 aa11.02□□□□□ -0.64
CLN8-201ENST00000331222 RNF14Q9UBS8 474 aa11.02□□□□□ -0.64
CLN8-201ENST00000331222 PADI4Q9UM07 663 aa11.02□□□□□ -0.64
CLN8-201ENST00000331222 AATKQ6ZMQ8 1374 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 IQCMA0A1B0GVH7 501 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 TTC26A0AVF1 554 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 F8W810 466 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 CHGBP05060 677 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 FGFR2P21802 821 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 CSNK2BP67870 215 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 INPP5AQ14642 412 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 CAMKK1Q8N5S9 505 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 OR2W6PQ8NHA6 318 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.02□□□□□ -0.65
CLN8-201ENST00000331222 MTFMTQ96DP5 389 aaKnown RBP11.02□□□□□ -0.65
CLN8-201ENST00000331222 MTERF3Q96E29 417 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 GOLPH3Q9H4A6 298 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 PKD2L2Q9NZM6 624 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 TSPAN3O60637 253 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 ZNF286BP0CG31 522 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 POU1F1P28069 291 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 PRPF39Q86UA1 669 aaKnown RBP11.02□□□□□ -0.65
CLN8-201ENST00000331222 PROM2Q8N271 834 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 GLRBP48167 497 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 NFIXQ14938 502 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 SNX17Q15036 470 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 SNRNP35Q16560 246 aaKnown RBP11.02□□□□□ -0.65
CLN8-201ENST00000331222 CEP55Q53EZ4 464 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 HPDLQ96IR7 371 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 C9orf72Q96LT7 481 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 FBXO10Q9UK96 956 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 APOA1P02647 267 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 PNMA6AP0CW24 399 aaPredicted RBP11.02□□□□□ -0.65
CLN8-201ENST00000331222 HNRNPH2P55795 449 aaKnown RBP11.02□□□□□ -0.65
CLN8-201ENST00000331222 NAA30Q147X3 362 aaPredicted RBP11.02□□□□□ -0.65
CLN8-201ENST00000331222 SV2CQ496J9 727 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 RNF180Q86T96 592 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 SH2D3CQ8N5H7 860 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 B3GALNT2Q8NCR0 500 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 PARK7Q99497 189 aaKnown RBP11.02□□□□□ -0.65
CLN8-201ENST00000331222 FAM129AQ9BZQ8 928 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 ZCCHC17Q9NP64 241 aaKnown RBP11.02□□□□□ -0.65
CLN8-201ENST00000331222 ARHGEF3Q9NR81 526 aa11.02□□□□□ -0.65
CLN8-201ENST00000331222 HEATR9A2RTY3 570 aa11.01□□□□□ -0.65
CLN8-201ENST00000331222 SYNCRIPO60506 623 aaKnown RBP11.01□□□□□ -0.65
CLN8-201ENST00000331222 NUDT14O95848 222 aa11.01□□□□□ -0.65
CLN8-201ENST00000331222 MYBL1P10243 752 aa11.01□□□□□ -0.65
CLN8-201ENST00000331222 TNNI3P19429 210 aa11.01□□□□□ -0.65
CLN8-201ENST00000331222 GSSP48637 474 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms