RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 RBM41Q96IZ5 413 aaKnown RBP16.25■□□□□ 0.19
BRCC3-201ENST00000330045 CDHR1Q96JP9 859 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 CXorf56Q9H5V9 222 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 PICK1Q9NRD5 415 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 ZNF148Q9UQR1 794 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 NUB1Q9Y5A7 615 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 EXOC1LA0A1B0GW35 172 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 FAM47DPA6NHR8 397 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 K7ERI5 159 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 IGF2BP3O00425 579 aaKnown RBP eCLIP16.24■□□□□ 0.19
BRCC3-201ENST00000330045 TJP3O95049 919 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 TAC1P20366 129 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 NOP14P78316 857 aaKnown RBP16.24■□□□□ 0.19
BRCC3-201ENST00000330045 GLIS1Q8NBF1 620 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 SLITRK1Q96PX8 696 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 PITPNM3Q9BZ71 974 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 PNMA3Q9UL41 463 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 LRRIQ4A6NIV6 560 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 USP2O75604 605 aaPredicted RBP16.24■□□□□ 0.19
BRCC3-201ENST00000330045 PIGRP01833 764 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 ATF7P17544 494 aaPredicted RBP16.24■□□□□ 0.19
BRCC3-201ENST00000330045 FOXN2P32314 431 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 ZBTB41Q5SVQ8 909 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 RNF43Q68DV7 783 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 DRICH1Q6PGQ1 229 aaPredicted RBP16.24■□□□□ 0.19
BRCC3-201ENST00000330045 DEPTORQ8TB45 409 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 ZNF606Q8WXB4 792 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 RMDN2Q96LZ7 410 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 CGRRF1Q99675 332 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 MSTO1Q9BUK6 570 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 ANKFY1Q9P2R3 1169 aa16.24■□□□□ 0.19
BRCC3-201ENST00000330045 TMEM191CA6NGB0 347 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 TMEM191BP0C7N4 346 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 SUPT20HL2P0C7V6 817 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 ZSCAN5DPP0CG00 497 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 TCF4P15884 667 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 MMP8P22894 467 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 ALDH5A1P51649 535 aaPredicted RBP16.23■□□□□ 0.19
BRCC3-201ENST00000330045 WDR4P57081 412 aaKnown RBP16.23■□□□□ 0.19
BRCC3-201ENST00000330045 NR1H3Q13133 447 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 SUPT20HL1Q3ZLR7 823 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 EAPPQ56P03 285 aaPredicted RBP16.23■□□□□ 0.19
BRCC3-201ENST00000330045 MFSD7Q6UXD7 560 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 TRABD2AQ86V40 505 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 OR5B17Q8NGF7 314 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 ASAP3Q8TDY4 903 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 KCNN1Q92952 543 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 TTC25Q96NG3 672 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 PAIP2Q9BPZ3 127 aaKnown RBP16.23■□□□□ 0.19
BRCC3-201ENST00000330045 TARS2Q9BW92 718 aaKnown RBP16.23■□□□□ 0.19
BRCC3-201ENST00000330045 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.23■□□□□ 0.19
BRCC3-201ENST00000330045 COL11A1P12107 1806 aaPredicted RBP16.23■□□□□ 0.19
BRCC3-201ENST00000330045 RLFQ13129 1914 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 KRT1P04264 644 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 GLRA2P23416 452 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 GCAP28676 217 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 NAMPTP43490 491 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 ARSEP51690 589 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 MGAT5Q09328 741 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 ACVR2BQ13705 512 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 NCOA4Q13772 614 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 ALLCQ8N6M5 410 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 PORCNQ9H237 461 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 UBN1Q9NPG3 1134 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 ARHGEF3Q9NR81 526 aa16.23■□□□□ 0.19
BRCC3-201ENST00000330045 SIP14410 1827 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 PECAM1P16284 738 aaPredicted RBP16.22■□□□□ 0.19
BRCC3-201ENST00000330045 MCL1Q07820 350 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 GPS1Q13098 491 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 VGLL4Q14135 290 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 GNPTABQ3T906 1256 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 TDRPQ86YL5 185 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 REPS2Q8NFH8 660 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.22■□□□□ 0.19
BRCC3-201ENST00000330045 FBXO40Q9UH90 709 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 IVNS1ABPQ9Y6Y0 642 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 PHIPQ8WWQ0 1821 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 CNTNAP2Q9UHC6 1331 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 A0A0B4J269 797 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 A0A1B0GUA9 196 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 SPATA31C2B4DYI2 1134 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 POC1B-GALNT4F8VUJ3 575 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 SPAG7O75391 227 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 ASMTLO95671 621 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 ALADP13716 330 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 ETS1P14921 441 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 ATP4AP20648 1035 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 ELF1P32519 619 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 PDE4CQ08493 712 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 FAM47EQ6ZV65 393 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 ECHDC2Q86YB7 292 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 KIF2BQ8N4N8 673 aa16.22■□□□□ 0.19
BRCC3-201ENST00000330045 DRG1Q9Y295 367 aaKnown RBP16.22■□□□□ 0.19
BRCC3-201ENST00000330045 MYH9P35579 1960 aaKnown RBP16.22■□□□□ 0.19
BRCC3-201ENST00000330045 F8VP50 259 aa16.21■□□□□ 0.19
BRCC3-201ENST00000330045 HGSO14964 777 aaPredicted RBP16.21■□□□□ 0.19
BRCC3-201ENST00000330045 CALB1P05937 261 aa16.21■□□□□ 0.19
BRCC3-201ENST00000330045 KRT16P08779 473 aa16.21■□□□□ 0.19
BRCC3-201ENST00000330045 ZNF252P-AS1Q0IIN9 211 aa16.21■□□□□ 0.19
BRCC3-201ENST00000330045 FASTKD3Q14CZ7 662 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms