RNA–Protein interactions for RNA: ENST00000329305.6

TPM2-201, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM2, Length 1,018 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-201ENST00000329305 S1PR5Q9H228 398 aa17.7■□□□□ 0.42
TPM2-201ENST00000329305 MAFFQ9ULX9 164 aa17.7■□□□□ 0.42
TPM2-201ENST00000329305 PRUNE2Q8WUY3 3088 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 CCDC195A0A1B0GUA6 201 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 PRRG1O14668 218 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 ZMYND10O75800 440 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 ABLIM3O94929 683 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 C8AP07357 584 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 BMP1P13497 986 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 P4HA1P13674 534 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 IL9P15248 144 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 ATF2P15336 505 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 MTHFRP42898 656 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 LHX1P48742 406 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 MXI1P50539 228 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 TSPY1Q01534 308 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 PPP3CAQ08209 521 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 SMAD2Q15796 467 aaKnown RBP17.69■□□□□ 0.42
TPM2-201ENST00000329305 SGSM1Q2NKQ1 1148 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 DPCR1Q3MIW9 517 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 ZNF667Q5HYK9 610 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 ATAT1Q5SQI0 421 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 C1orf220Q5T0J3 134 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 SCARA3Q6AZY7 606 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 SASS6Q6UVJ0 657 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 CYP26C1Q6V0L0 522 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 RBM43Q6ZSC3 357 aaKnown RBP17.69■□□□□ 0.42
TPM2-201ENST00000329305 SLC7A14Q8TBB6 771 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 TAF4BQ92750 862 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 NECTIN4Q96NY8 510 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 SRRTQ9BXP5 876 aaKnown RBP17.69■□□□□ 0.42
TPM2-201ENST00000329305 VRTNQ9H8Y1 702 aa17.69■□□□□ 0.42
TPM2-201ENST00000329305 NXF1Q9UBU9 619 aaKnown RBP17.69■□□□□ 0.42
TPM2-201ENST00000329305 AFF4Q9UHB7 1163 aaKnown RBP17.69■□□□□ 0.42
TPM2-201ENST00000329305 VNN1O95497 513 aa17.68■□□□□ 0.42
TPM2-201ENST00000329305 HLA-DRAP01903 254 aa17.68■□□□□ 0.42
TPM2-201ENST00000329305 HNRNPA1P09651 372 aaKnown RBP eCLIP17.68■□□□□ 0.42
TPM2-201ENST00000329305 CCDC192P0DO97 292 aa17.68■□□□□ 0.42
TPM2-201ENST00000329305 PCSK1P29120 753 aa17.68■□□□□ 0.42
TPM2-201ENST00000329305 HOXA9P31269 272 aa17.68■□□□□ 0.42
TPM2-201ENST00000329305 SCN1AP35498 2009 aa17.68■□□□□ 0.42
TPM2-201ENST00000329305 MCCD1P59942 119 aaPredicted RBP17.68■□□□□ 0.42
TPM2-201ENST00000329305 ADCY1Q08828 1119 aa17.68■□□□□ 0.42
TPM2-201ENST00000329305 SMARCB1Q12824 385 aa17.68■□□□□ 0.42
TPM2-201ENST00000329305 GPR17Q13304 367 aa17.68■□□□□ 0.42
TPM2-201ENST00000329305 CBX2Q14781 532 aaPredicted RBP17.68■□□□□ 0.42
TPM2-201ENST00000329305 SOWAHAQ2M3V2 549 aa17.68■□□□□ 0.42
TPM2-201ENST00000329305 CT47A1Q5JQC4 288 aaPredicted RBP17.68■□□□□ 0.42
TPM2-201ENST00000329305 DCP1BQ8IZD4 617 aaKnown RBP17.68■□□□□ 0.42
TPM2-201ENST00000329305 XYLT2Q9H1B5 865 aa17.68■□□□□ 0.42
TPM2-201ENST00000329305 PIDD1Q9HB75 910 aa17.68■□□□□ 0.42
TPM2-201ENST00000329305 CYP4F11Q9HBI6 524 aa17.68■□□□□ 0.42
TPM2-201ENST00000329305 DDX43Q9NXZ2 648 aaKnown RBP17.68■□□□□ 0.42
TPM2-201ENST00000329305 SPTBN5Q9NRC6 3674 aaKnown RBP17.68■□□□□ 0.42
TPM2-201ENST00000329305 XIRP2A4UGR9 3374 aa17.67■□□□□ 0.42
TPM2-201ENST00000329305 XYLBO75191 536 aa17.67■□□□□ 0.42
TPM2-201ENST00000329305 RFPL2O75678 378 aa17.67■□□□□ 0.42
TPM2-201ENST00000329305 LRG1P02750 347 aa17.67■□□□□ 0.42
TPM2-201ENST00000329305 FAM163BP0C2L3 166 aa17.67■□□□□ 0.42
TPM2-201ENST00000329305 OR4Q2P0C623 313 aa17.67■□□□□ 0.42
TPM2-201ENST00000329305 ERCC5P28715 1186 aaPredicted RBP17.67■□□□□ 0.42
TPM2-201ENST00000329305 RNF19BQ6ZMZ0 732 aa17.67■□□□□ 0.42
TPM2-201ENST00000329305 GPR149Q86SP6 731 aa17.67■□□□□ 0.42
TPM2-201ENST00000329305 TCEAL8Q8IYN2 117 aa17.67■□□□□ 0.42
TPM2-201ENST00000329305 OR10T2Q8NGX3 314 aa17.67■□□□□ 0.42
TPM2-201ENST00000329305 SUSD6Q92537 303 aa17.67■□□□□ 0.42
TPM2-201ENST00000329305 SMG7Q92540 1137 aaKnown RBP17.67■□□□□ 0.42
TPM2-201ENST00000329305 PGLYRP2Q96PD5 576 aa17.67■□□□□ 0.42
TPM2-201ENST00000329305 ACBD6Q9BR61 282 aa17.67■□□□□ 0.42
TPM2-201ENST00000329305 PRKD2Q9BZL6 878 aa17.67■□□□□ 0.42
TPM2-201ENST00000329305 ZCWPW1Q9H0M4 648 aa17.67■□□□□ 0.42
TPM2-201ENST00000329305 SNX25Q9H3E2 840 aa17.67■□□□□ 0.42
TPM2-201ENST00000329305 PRKAG3Q9UGI9 489 aa17.67■□□□□ 0.42
TPM2-201ENST00000329305 REV3LO60673 3130 aa17.67■□□□□ 0.42
TPM2-201ENST00000329305 GABRDO14764 452 aa17.66■□□□□ 0.42
TPM2-201ENST00000329305 TACC1O75410 805 aa17.66■□□□□ 0.42
TPM2-201ENST00000329305 WARSP23381 471 aaKnown RBP17.66■□□□□ 0.42
TPM2-201ENST00000329305 SLC39A12Q504Y0 691 aa17.66■□□□□ 0.42
TPM2-201ENST00000329305 CAVIN1Q6NZI2 390 aaKnown RBP17.66■□□□□ 0.42
TPM2-201ENST00000329305 FBXL13Q8NEE6 735 aa17.66■□□□□ 0.42
TPM2-201ENST00000329305 TAS1R2Q8TE23 839 aa17.66■□□□□ 0.42
TPM2-201ENST00000329305 ADAMTS19Q8TE59 1207 aa17.66■□□□□ 0.42
TPM2-201ENST00000329305 C2orf15Q8WU43 125 aaKnown RBP17.66■□□□□ 0.42
TPM2-201ENST00000329305 SLC35C1Q96A29 364 aa17.66■□□□□ 0.42
TPM2-201ENST00000329305 TMEM209Q96SK2 561 aa17.66■□□□□ 0.42
TPM2-201ENST00000329305 RTP3Q9BQQ7 232 aa17.66■□□□□ 0.42
TPM2-201ENST00000329305 RHOBTB2Q9BYZ6 727 aa17.66■□□□□ 0.42
TPM2-201ENST00000329305 ANO10Q9NW15 660 aa17.66■□□□□ 0.42
TPM2-201ENST00000329305 POLIQ9UNA4 740 aa17.66■□□□□ 0.42
TPM2-201ENST00000329305 N4BP1O75113 896 aaKnown RBP17.65■□□□□ 0.42
TPM2-201ENST00000329305 ASS1P00966 412 aaKnown RBP17.65■□□□□ 0.42
TPM2-201ENST00000329305 WEE2P0C1S8 567 aa17.65■□□□□ 0.42
TPM2-201ENST00000329305 MARSP56192 900 aaKnown RBP17.65■□□□□ 0.42
TPM2-201ENST00000329305 NOP14P78316 857 aaKnown RBP17.65■□□□□ 0.42
TPM2-201ENST00000329305 CETN1Q12798 172 aa17.65■□□□□ 0.42
TPM2-201ENST00000329305 WDR44Q5JSH3 913 aa17.65■□□□□ 0.42
TPM2-201ENST00000329305 INTS6LQ5JSJ4 861 aaKnown RBP17.65■□□□□ 0.42
TPM2-201ENST00000329305 LIMS2Q7Z4I7 341 aa17.65■□□□□ 0.42
TPM2-201ENST00000329305 CREBRFQ8IUR6 639 aa17.65■□□□□ 0.42
TPM2-201ENST00000329305 FAM114A1Q8IWE2 563 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms