RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 EAPPQ56P03 285 aaPredicted RBP11.88□□□□□ -0.51
GINS3-202ENST00000328514 SLC51AQ86UW1 340 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 KBTBD2Q8IY47 623 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 VPS52Q8N1B4 723 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 ALLCQ8N6M5 410 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 BANPQ8N9N5 519 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 SPATA16Q9BXB7 569 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 MANSC1Q9H8J5 431 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 TMEM8AQ9HCN3 771 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 KCNQ5Q9NR82 932 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 SRP68Q9UHB9 627 aaKnown RBP11.88□□□□□ -0.51
GINS3-202ENST00000328514 GGA1Q9UJY5 639 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 IRF6O14896 467 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 KLF11O14901 512 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 ATP2A1O14983 1001 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 TSHRP16473 764 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 ADRA1DP25100 572 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 CETN2P41208 172 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 ARFIP2P53365 341 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 HNRNPDQ14103 355 aaKnown RBP11.88□□□□□ -0.51
GINS3-202ENST00000328514 FASTKD3Q14CZ7 662 aaKnown RBP11.88□□□□□ -0.51
GINS3-202ENST00000328514 RNASEH2BQ5TBB1 312 aaKnown RBP11.88□□□□□ -0.51
GINS3-202ENST00000328514 RINLQ6ZS11 566 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 CENPUQ71F23 418 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 NET1Q7Z628 596 aaPredicted RBP11.88□□□□□ -0.51
GINS3-202ENST00000328514 ADGRG6Q86SQ4 1221 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 CCNJLQ8IV13 435 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 STKLD1Q8NE28 680 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.88□□□□□ -0.51
GINS3-202ENST00000328514 NT5C1BQ96P26 610 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 HEMGNQ9BXL5 484 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 PCIF1Q9H4Z3 704 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 RABGEF1Q9UJ41 708 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 COMMD3-BMI1R4GMX3 469 aa11.88□□□□□ -0.51
GINS3-202ENST00000328514 MYPNQ86TC9 1320 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 ARHGEF35A5YM69 484 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 GAS7O60861 476 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 ZC3H11AO75152 810 aaKnown RBP eCLIP11.87□□□□□ -0.51
GINS3-202ENST00000328514 CYP1A1P04798 512 aaPredicted RBP11.87□□□□□ -0.51
GINS3-202ENST00000328514 PTPN7P35236 360 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 SERPINB4P48594 390 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 CDK7P50613 346 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 CDK18Q07002 472 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 PRKD1Q15139 912 aaPredicted RBP11.87□□□□□ -0.51
GINS3-202ENST00000328514 TRMT5Q32P41 509 aaKnown RBP11.87□□□□□ -0.51
GINS3-202ENST00000328514 CNPY1Q3B7I2 92 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 CCDC62Q6P9F0 684 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 GSTA5Q7RTV2 222 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 TMPRSS6Q8IU80 811 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 SIAH1Q8IUQ4 282 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 CCDC24Q8N4L8 307 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 TMC2Q8TDI7 906 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 DHX38Q92620 1227 aaKnown RBP11.87□□□□□ -0.51
GINS3-202ENST00000328514 NKD2Q969F2 451 aaPredicted RBP11.87□□□□□ -0.51
GINS3-202ENST00000328514 VCPIP1Q96JH7 1222 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 TSSK1BQ9BXA7 367 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 PPP1R12CQ9BZL4 782 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 RANBP17Q9H2T7 1088 aaKnown RBP11.87□□□□□ -0.51
GINS3-202ENST00000328514 ACSS3Q9H6R3 686 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 VPS37BQ9H9H4 285 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 C17orf75Q9HAS0 396 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 GPAMQ9HCL2 828 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 ARHGEF4Q9NR80 690 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 ZDHHC7Q9NXF8 308 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 DCTN4Q9UJW0 460 aa11.87□□□□□ -0.51
GINS3-202ENST00000328514 CAPN14A8MX76 684 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 TISP43B9A030 160 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 FAM155BO75949 473 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 ATP5BP06576 529 aaKnown RBP11.86□□□□□ -0.51
GINS3-202ENST00000328514 ADRB2P07550 413 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 ESRRAP11474 423 aaPredicted RBP11.86□□□□□ -0.51
GINS3-202ENST00000328514 SERPINB3P29508 390 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 PHBP35232 272 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 ETV4P43268 484 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 GPX6P59796 221 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 DSG1Q02413 1049 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 MCL1Q07820 350 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 KLHL38Q2WGJ6 581 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 LIN52Q52LA3 116 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 PADI6Q6TGC4 694 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 MON1BQ7L1V2 547 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 MYLK4Q86YV6 388 aaPredicted RBP11.86□□□□□ -0.51
GINS3-202ENST00000328514 RCOR2Q8IZ40 523 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 SCYL3Q8IZE3 742 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 PDCD7Q8N8D1 485 aaKnown RBP11.86□□□□□ -0.51
GINS3-202ENST00000328514 FBXL13Q8NEE6 735 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 TCP10LQ8TDR4 215 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 OPTNQ96CV9 577 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 OLFM3Q96PB7 478 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 LXNQ9BS40 222 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 FHDC1Q9C0D6 1143 aaPredicted RBP11.86□□□□□ -0.51
GINS3-202ENST00000328514 ZWILCHQ9H900 591 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 METTL5Q9NRN9 209 aaKnown RBP11.86□□□□□ -0.51
GINS3-202ENST00000328514 STK32BQ9NY57 414 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 BCS1LQ9Y276 419 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 FARP1Q9Y4F1 1045 aaPredicted RBP11.86□□□□□ -0.51
GINS3-202ENST00000328514 A0A0G2JND7 137 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 ITGAVP06756 1048 aa11.86□□□□□ -0.51
GINS3-202ENST00000328514 PABPC4LP0CB38 370 aaKnown RBP11.86□□□□□ -0.51
GINS3-202ENST00000328514 HOXA13P31271 388 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms