RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 POTECB2RU33 542 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 TGFB3P10600 412 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 KCNA2P16389 499 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 HOXB8P17481 243 aaPredicted RBP13.17□□□□□ -0.3
FN1-201ENST00000323926 HLA-DPA1P20036 260 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 ARL4DP49703 201 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 ACCSLQ4AC99 568 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 C16orf86Q6ZW13 317 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 SPATA18Q8TC71 538 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 SMYD3Q9H7B4 428 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 TRAF3IP3Q9Y228 551 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 TERF2Q15554 542 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 RMND5BQ96G75 393 aaPredicted RBP13.17□□□□□ -0.3
FN1-201ENST00000323926 ADGRE3Q9BY15 652 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 ZFYVE28Q9HCC9 887 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 ZNF839A8K0R7 811 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 PSMD14O00487 310 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 SNRPAP09012 282 aaKnown RBP13.17□□□□□ -0.3
FN1-201ENST00000323926 FAM200BP0CF97 657 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 CNTN1Q12860 1018 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 TMCO4Q5TGY1 634 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 HORMAD1Q86X24 394 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 ANTXR1Q9H6X2 564 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 POLIQ9UNA4 740 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 FAM47E-STBD1D6RA91 191 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 PEX6Q13608 980 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 TFDP3Q5H9I0 405 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 DEPDC1Q5TB30 811 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 ZDHHC17Q8IUH5 632 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 SLC22A9Q8IVM8 553 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 MB21D2Q8IYB1 491 aaPredicted RBP13.17□□□□□ -0.3
FN1-201ENST00000323926 ST13P5Q8NFI4 369 aaPredicted RBP13.17□□□□□ -0.3
FN1-201ENST00000323926 SLC16A10Q8TF71 515 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 FRMD3A2A2Y4 597 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 RPN2P04844 631 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 GGCXP38435 758 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 SLC7A5Q01650 507 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 UBE2SQ16763 222 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 SHCBP1Q8NEM2 672 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 RPAP3Q9H6T3 665 aaPredicted RBP13.16□□□□□ -0.3
FN1-201ENST00000323926 SLC30A1Q9Y6M5 507 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 ST13P50502 369 aaKnown RBP13.16□□□□□ -0.3
FN1-201ENST00000323926 ARPP19P56211 112 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 MRPS35P82673 323 aaKnown RBP13.16□□□□□ -0.3
FN1-201ENST00000323926 MYBPC2Q14324 1141 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 RABL6Q3YEC7 729 aaPredicted RBP13.16□□□□□ -0.3
FN1-201ENST00000323926 PARP9Q8IXQ6 854 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 UBXN6Q9BZV1 441 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 INTS2Q9H0H0 1204 aaKnown RBP13.16□□□□□ -0.3
FN1-201ENST00000323926 PCDHB7Q9Y5E2 793 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 MORC2Q9Y6X9 1032 aaPredicted RBP13.16□□□□□ -0.3
FN1-201ENST00000323926 MYL6P60660 151 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 MRNIPQ6NTE8 343 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 DHX40Q8IX18 779 aaKnown RBP13.16□□□□□ -0.3
FN1-201ENST00000323926 CCNYL1Q8N7R7 359 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 ISCA1Q9BUE6 129 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 ANLNQ9NQW6 1124 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 STMN3Q9NZ72 180 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 ATP11BQ9Y2G3 1177 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 POTEFA5A3E0 1075 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 PI4K2BG5E9Z4 385 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 WDR47O94967 919 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 POTEIP0CG38 1075 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 TRPC1P48995 793 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 NUP107P57740 925 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 NCF4Q15080 339 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 ARMC6Q6NXE6 501 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 POTEGQ6S5H5 508 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 POTEEQ6S8J3 1075 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 ARMC2Q8NEN0 867 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 HES6Q96HZ4 224 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 TRABDQ9H4I3 376 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 PRRG1O14668 218 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 PGM1P36871 562 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 GCLCP48506 637 aaPredicted RBP13.16□□□□□ -0.3
FN1-201ENST00000323926 UNC45BQ8IWX7 931 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 TFB1MQ8WVM0 346 aaKnown RBP13.16□□□□□ -0.3
FN1-201ENST00000323926 SH3GL3Q99963 347 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 ETNK1Q9HBU6 452 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 TMEM161AQ9NX61 479 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 SF3B1O75533 1304 aaKnown RBP eCLIP13.16□□□□□ -0.38e-6■■■■■ 107
FN1-201ENST00000323926 WDR91A4D1P6 747 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 RPSAP08865 295 aaKnown RBP13.16□□□□□ -0.3
FN1-201ENST00000323926 ATICP31939 592 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 SWSAP1Q6NVH7 229 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 CASS4Q9NQ75 786 aa13.16□□□□□ -0.3
FN1-201ENST00000323926 ZBBXA8MT70 800 aa13.15□□□□□ -0.3
FN1-201ENST00000323926 ZSCAN9O15535 394 aaPredicted RBP13.15□□□□□ -0.3
FN1-201ENST00000323926 CCDC159P0C7I6 412 aa13.15□□□□□ -0.3
FN1-201ENST00000323926 NME3Q13232 169 aa13.15□□□□□ -0.3
FN1-201ENST00000323926 FAM217BQ9NTX9 383 aaPredicted RBP13.15□□□□□ -0.3
FN1-201ENST00000323926 XPO7Q9UIA9 1087 aaKnown RBP13.15□□□□□ -0.3
FN1-201ENST00000323926 VWDEQ8N2E2 1590 aa13.15□□□□□ -0.3
FN1-201ENST00000323926 PRKCBP05771 671 aa13.15□□□□□ -0.3
FN1-201ENST00000323926 ELAVL2Q12926 359 aaKnown RBP13.15□□□□□ -0.3
FN1-201ENST00000323926 SPDYAQ5MJ70 313 aa13.15□□□□□ -0.3
FN1-201ENST00000323926 ATP6V0D2Q8N8Y2 350 aa13.15□□□□□ -0.3
FN1-201ENST00000323926 PUS3Q9BZE2 481 aaKnown RBP13.15□□□□□ -0.3
FN1-201ENST00000323926 HSPBP1Q9NZL4 362 aa13.15□□□□□ -0.3
FN1-201ENST00000323926 UBA6A0AVT1 1052 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms