RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 CISHQ9NSE2 258 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 NRBP2Q9NSY0 501 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 NKIRAS1Q9NYS0 192 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 EXOC1LA0A1B0GW35 172 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 BANF1O75531 89 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 UBOX5O94941 541 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 KRT19P08727 400 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 SGSM3Q96HU1 749 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 SLITRK1Q96PX8 696 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 TMEM191CA6NGB0 347 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 C19orf81C9J6K1 198 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 SGK1O00141 431 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 ADCY3O60266 1144 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 TMEM191BP0C7N4 346 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 RDXP35241 583 aaKnown RBP18.41■□□□□ 0.54
COL9A1-201ENST00000320755 TCF7P36402 384 aaPredicted RBP18.41■□□□□ 0.54
COL9A1-201ENST00000320755 ZNF252P-AS1Q0IIN9 211 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 E2F5Q15329 346 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.41■□□□□ 0.54
COL9A1-201ENST00000320755 TRPM4Q8TD43 1214 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 TFAP2BQ92481 460 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.41■□□□□ 0.54
COL9A1-201ENST00000320755 TJP2Q9UDY2 1190 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 BAIAP2L1Q9UHR4 511 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 KCNG1Q9UIX4 513 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 USP15Q9Y4E8 981 aaPredicted RBP18.41■□□□□ 0.54
COL9A1-201ENST00000320755 LIASO43766 372 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 CDH16O75309 829 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 RPS12P25398 132 aaKnown RBP18.41■□□□□ 0.54
COL9A1-201ENST00000320755 KLRC2P26717 231 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 ITIH4Q14624 930 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 SNCBQ16143 134 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 TREML2Q5T2D2 321 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 ERICH1Q86X53 443 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 RCOR2Q8IZ40 523 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 VCPIP1Q96JH7 1222 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 R3HDMLQ9H3Y0 253 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 KIF9Q9HAQ2 790 aa18.41■□□□□ 0.54
COL9A1-201ENST00000320755 TJP3O95049 919 aa18.4■□□□□ 0.54
COL9A1-201ENST00000320755 PECAM1P16284 738 aaPredicted RBP18.4■□□□□ 0.54
COL9A1-201ENST00000320755 HIRAP54198 1017 aaPredicted RBP18.4■□□□□ 0.54
COL9A1-201ENST00000320755 DPH6Q7L8W6 267 aa18.4■□□□□ 0.54
COL9A1-201ENST00000320755 CEP120Q8N960 986 aa18.4■□□□□ 0.54
COL9A1-201ENST00000320755 CCDC63Q8NA47 563 aa18.4■□□□□ 0.54
COL9A1-201ENST00000320755 KLRG1Q96E93 195 aa18.4■□□□□ 0.54
COL9A1-201ENST00000320755 CCDC134Q9H6E4 229 aa18.4■□□□□ 0.54
COL9A1-201ENST00000320755 GGA3Q9NZ52 723 aa18.4■□□□□ 0.54
COL9A1-201ENST00000320755 TPX2Q9ULW0 747 aaKnown RBP18.4■□□□□ 0.54
COL9A1-201ENST00000320755 AGAP1Q9UPQ3 857 aa18.4■□□□□ 0.54
COL9A1-201ENST00000320755 AFG3L2Q9Y4W6 797 aa18.4■□□□□ 0.54
COL9A1-201ENST00000320755 ASS1P00966 412 aaKnown RBP18.4■□□□□ 0.54
COL9A1-201ENST00000320755 RAP1GAPP47736 663 aa18.4■□□□□ 0.54
COL9A1-201ENST00000320755 ANKMY2Q8IV38 441 aa18.4■□□□□ 0.54
COL9A1-201ENST00000320755 BBOF1Q8ND07 529 aa18.4■□□□□ 0.54
COL9A1-201ENST00000320755 TRAPPC12Q8WVT3 735 aa18.4■□□□□ 0.54
COL9A1-201ENST00000320755 ADGRA2Q96PE1 1338 aa18.39■□□□□ 0.54
COL9A1-201ENST00000320755 CSDE1O75534 798 aaKnown RBP18.39■□□□□ 0.54
COL9A1-201ENST00000320755 SPOCD1Q6ZMY3 1216 aa18.39■□□□□ 0.54
COL9A1-201ENST00000320755 ZBED8Q8IZ13 594 aa18.39■□□□□ 0.54
COL9A1-201ENST00000320755 TMEM35BQ8NCS4 154 aa18.39■□□□□ 0.54
COL9A1-201ENST00000320755 PPP1R16BQ96T49 567 aa18.39■□□□□ 0.54
COL9A1-201ENST00000320755 ZNF112Q9UJU3 913 aa18.39■□□□□ 0.54
COL9A1-201ENST00000320755 AGTPBP1Q9UPW5 1226 aa18.39■□□□□ 0.54
COL9A1-201ENST00000320755 STAM2O75886 525 aa18.39■□□□□ 0.53
COL9A1-201ENST00000320755 FARP2O94887 1054 aaPredicted RBP18.39■□□□□ 0.53
COL9A1-201ENST00000320755 KRT15P19012 456 aa18.39■□□□□ 0.53
COL9A1-201ENST00000320755 ALDH5A1P51649 535 aaPredicted RBP18.39■□□□□ 0.53
COL9A1-201ENST00000320755 RHPN2Q8IUC4 686 aa18.39■□□□□ 0.53
COL9A1-201ENST00000320755 C4orf33Q8N1A6 199 aa18.39■□□□□ 0.53
COL9A1-201ENST00000320755 P3H4Q92791 437 aa18.39■□□□□ 0.53
COL9A1-201ENST00000320755 TBC1D31Q96DN5 1066 aa18.39■□□□□ 0.53
COL9A1-201ENST00000320755 RBM41Q96IZ5 413 aaKnown RBP18.39■□□□□ 0.53
COL9A1-201ENST00000320755 NLRP4Q96MN2 994 aa18.39■□□□□ 0.53
COL9A1-201ENST00000320755 ARID2Q68CP9 1835 aa18.39■□□□□ 0.53
COL9A1-201ENST00000320755 SUN1O94901 812 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 ATG7O95352 703 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 GHRP10912 638 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 ABCD1P33897 745 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 CDH8P55286 799 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 BRSK2Q8IWQ3 736 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 CKAP2Q8WWK9 683 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 POLIQ9UNA4 740 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 CHUKO15111 745 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 PIGRP01833 764 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 XRCC4Q13426 336 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 DUOXA2Q1HG44 320 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 TMEM63BQ5T3F8 832 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 KIF2BQ8N4N8 673 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 WDTC1Q8N5D0 677 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 EMC1Q8N766 993 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 MRPL4Q9BYD3 311 aaKnown RBP18.38■□□□□ 0.53
COL9A1-201ENST00000320755 NIFKQ9BYG3 293 aaKnown RBP18.38■□□□□ 0.53
COL9A1-201ENST00000320755 BTBD7Q9P203 1132 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 PCSK1NQ9UHG2 260 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 PNMA3Q9UL41 463 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 INO80B-WBP1J3KQ70 363 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 CALB1P05937 261 aa18.38■□□□□ 0.53
COL9A1-201ENST00000320755 RFC1P35251 1148 aaPredicted RBP18.38■□□□□ 0.53
COL9A1-201ENST00000320755 LACTBP83111 547 aaPredicted RBP18.38■□□□□ 0.53
COL9A1-201ENST00000320755 GAD2Q05329 585 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 204.4 ms