RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 BRD8Q9H0E9 1235 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 SEL1LQ9UBV2 794 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 RRN3P2A6NIE6 340 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 CYP7B1O75881 506 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 GUCA1CO95843 209 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 ALDH6A1Q02252 535 aaKnown RBP9.24□□□□□ -0.93
SSBP2-201ENST00000320672 HSP90AA5PQ58FG0 334 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 PRAMEF19Q5SWL8 479 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 TATDN2Q93075 761 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 DRC3Q9H069 523 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 TUT1Q9H6E5 874 aaKnown RBP9.24□□□□□ -0.93
SSBP2-201ENST00000320672 IARS2Q9NSE4 1012 aaKnown RBP9.24□□□□□ -0.93
SSBP2-201ENST00000320672 HAO1Q9UJM8 370 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 ALG6Q9Y672 507 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 RHOBTB1O94844 696 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 KPNA2P52292 529 aaKnown RBP9.24□□□□□ -0.93
SSBP2-201ENST00000320672 STX3Q13277 289 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 PTRHD1Q6GMV3 140 aaKnown RBP9.24□□□□□ -0.93
SSBP2-201ENST00000320672 ATPAF2Q8N5M1 289 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 SHCBP1Q8NEM2 672 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 ST13P5Q8NFI4 369 aaPredicted RBP9.24□□□□□ -0.93
SSBP2-201ENST00000320672 NFIBO00712 420 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 SCAMP1O15126 338 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 ZC3H11AO75152 810 aaKnown RBP eCLIP9.24□□□□□ -0.93
SSBP2-201ENST00000320672 KATNA1O75449 491 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 NDUFS3O75489 264 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 GNAT1P11488 350 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 MAPK9P45984 424 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 TTC23LQ6PF05 361 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 LRRC34Q8IZ02 419 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 MAP10Q9P2G4 905 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 DDTLA6NHG4 134 aaPredicted RBP9.24□□□□□ -0.93
SSBP2-201ENST00000320672 SPATA18Q8TC71 538 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 NMRK2Q9NPI5 230 aa9.24□□□□□ -0.93
SSBP2-201ENST00000320672 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.24□□□□□ -0.93
SSBP2-201ENST00000320672 ZNF263O14978 683 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 ARIH2O95376 493 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 LMNAP02545 664 aaKnown RBP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 POU1F1P28069 291 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 EPHB2P29323 1055 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 EMBQ6PCB8 327 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 JAMLQ86YT9 394 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 MFN1Q8IWA4 741 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 CASKIN2Q8WXE0 1202 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 PWWP2AQ96N64 755 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 POLLQ9UGP5 575 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 PRDM15P57071 1507 aaPredicted RBP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 TMEM120BA0PK00 339 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 CCDC188H7C350 402 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 FOXN3O00409 490 aaPredicted RBP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 TSC22D2O75157 780 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 DDNO94850 711 aaPredicted RBP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 HSPA8P11142 646 aaKnown RBP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 MAP1SQ66K74 1059 aaPredicted RBP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 PRPF39Q86UA1 669 aaKnown RBP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 WNK4Q96J92 1243 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 ACTR5Q9H9F9 607 aaPredicted RBP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 NDE1Q9NXR1 346 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 TRDMT1O14717 391 aaKnown RBP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 ABCB1P08183 1280 aaPredicted RBP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 MAGEA4P43358 317 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 PGS1Q32NB8 556 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 FSCBQ5H9T9 825 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 CDKL3Q8IVW4 592 aaPredicted RBP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 FAM162AQ96A26 154 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 ROGDIQ9GZN7 287 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 SPASTQ9UBP0 616 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 TEKT2Q9UIF3 430 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 ATP7BP35670 1465 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 NLRP1Q9C000 1473 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 TMEM247A6NEH6 219 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 RGL2O15211 777 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 CAMTA2O94983 1202 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 MDH1P40925 334 aaKnown RBP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 C11orf63Q6NUN7 778 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 PTAR1Q7Z6K3 402 aaPredicted RBP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 C10orf53Q8N6V4 93 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 SEPT1Q8WYJ6 367 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 TMEM121Q9BTD3 319 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 GPR63Q9BZJ6 419 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 CAAP1Q9H8G2 361 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 KLC4Q9NSK0 619 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 RUVBL2Q9Y230 463 aaKnown RBP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 SLC30A1Q9Y6M5 507 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 TAF5Q15542 800 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 REXO1L1PQ8IX06 675 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 BARGINQ6ZT62 677 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 ZBTB45Q96K62 511 aaPredicted RBP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 ANKARQ7Z5J8 1434 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 SYNMO15061 1565 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 KRT4P19013 534 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 HSPA9P38646 679 aaKnown RBP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 MADCAM1Q13477 382 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 TRIP10Q15642 601 aa9.23□□□□□ -0.93
SSBP2-201ENST00000320672 AARS2Q5JTZ9 985 aaKnown RBP9.23□□□□□ -0.93
SSBP2-201ENST00000320672 SARM1Q6SZW1 724 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms