RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 AKT3Q9Y243 479 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 TNFSF13BQ9Y275 285 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 HYOU1Q9Y4L1 999 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 NUB1Q9Y5A7 615 aa13.89□□□□□ -0.19
CPNE1-201ENST00000317677 TRIP12Q14669 1992 aaPredicted RBP13.88□□□□□ -0.19
CPNE1-201ENST00000317677 E7EVH7 732 aa13.88□□□□□ -0.19
CPNE1-201ENST00000317677 ANP32DO95626 131 aa13.88□□□□□ -0.19
CPNE1-201ENST00000317677 F2P00734 622 aa13.88□□□□□ -0.19
CPNE1-201ENST00000317677 RGS19P49795 217 aa13.88□□□□□ -0.19
CPNE1-201ENST00000317677 OSTNP61366 133 aa13.88□□□□□ -0.19
CPNE1-201ENST00000317677 CFAP58Q5T655 872 aa13.88□□□□□ -0.19
CPNE1-201ENST00000317677 THNSL1Q8IYQ7 743 aa13.88□□□□□ -0.19
CPNE1-201ENST00000317677 SH2D3CQ8N5H7 860 aa13.88□□□□□ -0.19
CPNE1-201ENST00000317677 CAGE1Q8TC20 777 aa13.88□□□□□ -0.19
CPNE1-201ENST00000317677 MTMR12Q9C0I1 747 aa13.88□□□□□ -0.19
CPNE1-201ENST00000317677 SEPT11Q9NVA2 429 aaKnown RBP13.88□□□□□ -0.19
CPNE1-201ENST00000317677 SETD4Q9NVD3 440 aa13.88□□□□□ -0.19
CPNE1-201ENST00000317677 DMGDHQ9UI17 866 aaKnown RBP13.88□□□□□ -0.19
CPNE1-201ENST00000317677 COG5Q9UP83 839 aa13.88□□□□□ -0.19
CPNE1-201ENST00000317677 PTPN22Q9Y2R2 807 aa13.88□□□□□ -0.19
CPNE1-201ENST00000317677 ENO4A6NNW6 628 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 LUC7L3O95232 432 aaKnown RBP13.87□□□□□ -0.19
CPNE1-201ENST00000317677 GNRH1P01148 92 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 PAEPP09466 180 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 ALADP13716 330 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 ABCB4P21439 1286 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 IBSPP21815 317 aaPredicted RBP13.87□□□□□ -0.19
CPNE1-201ENST00000317677 PEX19P40855 299 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 PHKA2P46019 1235 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 CCNG1P51959 295 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 MLLT1Q03111 559 aaPredicted RBP13.87□□□□□ -0.19
CPNE1-201ENST00000317677 IRF5Q13568 498 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 PTPROQ16827 1216 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 CCDC38Q502W7 563 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 SLFN11Q7Z7L1 901 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 TLK2Q86UE8 772 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 WDR49Q8IV35 697 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 STAMBPL1Q96FJ0 436 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 CPB2Q96IY4 423 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 SEC16BQ96JE7 1060 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 LRRC1Q9BTT6 524 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 PDZD7Q9H5P4 517 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 C1orf112Q9NSG2 853 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 STIM2Q9P246 746 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 STXBP5LQ9Y2K9 1186 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 CFAP73A6NFT4 308 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 PAPOLAP51003 745 aaKnown RBP13.87□□□□□ -0.19
CPNE1-201ENST00000317677 CAP1Q01518 475 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 MYO1EQ12965 1108 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 SNX1Q13596 522 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 NCOA4Q13772 614 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 ENOSF1Q7L5Y1 443 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 CACNA2D3Q8IZS8 1091 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 TEX9Q8N6V9 391 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 UBR7Q8N806 425 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 SLC35G2Q8TBE7 412 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 RFFLQ8WZ73 363 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 MS4A14Q96JA4 679 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 ARHGAP39Q9C0H5 1083 aa13.87□□□□□ -0.19
CPNE1-201ENST00000317677 PRMT7Q9NVM4 692 aaPredicted RBP13.87□□□□□ -0.19
CPNE1-201ENST00000317677 CHCHD3Q9NX63 227 aaKnown RBP13.87□□□□□ -0.19
CPNE1-201ENST00000317677 NOP53Q9NZM5 478 aaKnown RBP13.87□□□□□ -0.19
CPNE1-201ENST00000317677 ANKRD62A6NC57 917 aa13.86□□□□□ -0.19
CPNE1-201ENST00000317677 PPFIA2O75334 1257 aa13.86□□□□□ -0.19
CPNE1-201ENST00000317677 FTLP02792 175 aaPredicted RBP13.86□□□□□ -0.19
CPNE1-201ENST00000317677 CLTAP09496 248 aa13.86□□□□□ -0.19
CPNE1-201ENST00000317677 SMIM10L2AP0DMW4 78 aa13.86□□□□□ -0.19
CPNE1-201ENST00000317677 SMIM10L2BP0DMW5 78 aa13.86□□□□□ -0.19
CPNE1-201ENST00000317677 CXCL8P10145 99 aa13.86□□□□□ -0.19
CPNE1-201ENST00000317677 TCP1P17987 556 aaKnown RBP13.86□□□□□ -0.19
CPNE1-201ENST00000317677 ARF4P18085 180 aaPredicted RBP13.86□□□□□ -0.19
CPNE1-201ENST00000317677 MAGEA8P43361 318 aa13.86□□□□□ -0.19
CPNE1-201ENST00000317677 NOP14P78316 857 aaKnown RBP13.86□□□□□ -0.19
CPNE1-201ENST00000317677 LACTBP83111 547 aaPredicted RBP13.86□□□□□ -0.19
CPNE1-201ENST00000317677 CDR2Q01850 454 aa13.86□□□□□ -0.19
CPNE1-201ENST00000317677 CUL2Q13617 745 aa13.86□□□□□ -0.19
CPNE1-201ENST00000317677 ZNF268Q14587 947 aaPredicted RBP13.86□□□□□ -0.19
CPNE1-201ENST00000317677 THEMIS2Q5TEJ8 643 aa13.86□□□□□ -0.19
CPNE1-201ENST00000317677 SDCCAG8Q86SQ7 713 aaPredicted RBP13.86□□□□□ -0.19
CPNE1-201ENST00000317677 TRPV1Q8NER1 839 aa13.86□□□□□ -0.19
CPNE1-201ENST00000317677 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.86□□□□□ -0.193e-13■■■■■ 108.9
CPNE1-201ENST00000317677 APBA2Q99767 749 aa13.86□□□□□ -0.19
CPNE1-201ENST00000317677 HAS3O00219 553 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 TSPAN1O60635 241 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 ASS1P00966 412 aaKnown RBP13.85□□□□□ -0.19
CPNE1-201ENST00000317677 KRT14P02533 472 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 CFHP08603 1231 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 KRT5P13647 590 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 FGFR4P22455 802 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 RGS2P41220 211 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 DNA2P51530 1060 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 PRMT2P55345 433 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 BEX3Q00994 111 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 C2orf54Q08AI8 447 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 SPRED3Q2MJR0 410 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 KCTD16Q68DU8 428 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 LRIG3Q6UXM1 1119 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 RUFY4Q6ZNE9 571 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 SPATA4Q8NEY3 305 aa13.85□□□□□ -0.19
CPNE1-201ENST00000317677 HDAC7Q8WUI4 952 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms