RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 SOX10P56693 466 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 ATP13A4Q4VNC1 1196 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 HHATQ5VTY9 493 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 CAPRIN2Q6IMN6 1127 aaKnown RBP20.16■□□□□ 0.82
RTN4-201ENST00000317610 CENPUQ71F23 418 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 ZNF75CPQ92670 426 aaPredicted RBP20.16■□□□□ 0.82
RTN4-201ENST00000317610 NKD2Q969F2 451 aaPredicted RBP20.16■□□□□ 0.82
RTN4-201ENST00000317610 SPDL1Q96EA4 605 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 PHACTR1Q9C0D0 580 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 APOBEC3GQ9HC16 384 aaKnown RBP20.16■□□□□ 0.82
RTN4-201ENST00000317610 SAR1AQ9NR31 198 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 ARHGAP28Q9P2N2 729 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 TCEAL9Q9UHQ7 104 aa20.16■□□□□ 0.82
RTN4-201ENST00000317610 PI4K2BG5E9Z4 385 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 HNRNPCL1O60812 293 aaKnown RBP20.15■□□□□ 0.82
RTN4-201ENST00000317610 ZWINTO95229 277 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 FGFR1P11362 822 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 ETS1P14921 441 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 PIK3CAP42336 1068 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 VCPP55072 806 aaKnown RBP20.15■□□□□ 0.82
RTN4-201ENST00000317610 SPOPLQ6IQ16 392 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 STYK1Q6J9G0 422 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 CCDC125Q86Z20 511 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 MAK16Q9BXY0 300 aaKnown RBP20.15■□□□□ 0.82
RTN4-201ENST00000317610 KLHL11Q9NVR0 708 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 PCDHB4Q9Y5E5 795 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 A0A1W2PPM1 405 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 TMEM191CA6NGB0 347 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 YDJCA8MPS7 323 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 SKAP2O75563 359 aaPredicted RBP20.15■□□□□ 0.82
RTN4-201ENST00000317610 KRT1P04264 644 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 ITGAVP06756 1048 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 TMEM191BP0C7N4 346 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 WNT7BP56706 349 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 KAZNQ674X7 775 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 LMBRD2Q68DH5 695 aaPredicted RBP20.15■□□□□ 0.82
RTN4-201ENST00000317610 SPOCD1Q6ZMY3 1216 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 NLRX1Q86UT6 975 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 ZBED8Q8IZ13 594 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 CFAP61Q8NHU2 1237 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 CEP170P1Q96L14 293 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 PCDH9Q9HC56 1237 aa20.15■□□□□ 0.82
RTN4-201ENST00000317610 ATP2A1O14983 1001 aa20.14■□□□□ 0.82
RTN4-201ENST00000317610 MMP10P09238 476 aa20.14■□□□□ 0.82
RTN4-201ENST00000317610 TCF4P15884 667 aa20.14■□□□□ 0.82
RTN4-201ENST00000317610 PTPN4P29074 926 aa20.14■□□□□ 0.82
RTN4-201ENST00000317610 EPHB2P29323 1055 aa20.14■□□□□ 0.82
RTN4-201ENST00000317610 CDC25CP30307 473 aa20.14■□□□□ 0.82
RTN4-201ENST00000317610 WDR72Q3MJ13 1102 aa20.14■□□□□ 0.82
RTN4-201ENST00000317610 LVRNQ6Q4G3 990 aa20.14■□□□□ 0.82
RTN4-201ENST00000317610 TMEM270Q6UE05 265 aa20.14■□□□□ 0.82
RTN4-201ENST00000317610 NLRP9Q7RTR0 991 aa20.14■□□□□ 0.82
RTN4-201ENST00000317610 DHX37Q8IY37 1157 aaKnown RBP20.14■□□□□ 0.82
RTN4-201ENST00000317610 MCPH1Q8NEM0 835 aa20.14■□□□□ 0.82
RTN4-201ENST00000317610 ASAP3Q8TDY4 903 aa20.14■□□□□ 0.82
RTN4-201ENST00000317610 FNBP1Q96RU3 617 aa20.14■□□□□ 0.82
RTN4-201ENST00000317610 PDCD2LQ9BRP1 358 aa20.14■□□□□ 0.82
RTN4-201ENST00000317610 DHRS4Q9BTZ2 278 aa20.14■□□□□ 0.82
RTN4-201ENST00000317610 PCDHA10Q9Y5I2 948 aa20.14■□□□□ 0.82
RTN4-201ENST00000317610 STYXL1Q9Y6J8 313 aa20.14■□□□□ 0.82
RTN4-201ENST00000317610 ZNF862O60290 1169 aa20.14■□□□□ 0.81
RTN4-201ENST00000317610 CBX6O95503 412 aa20.14■□□□□ 0.81
RTN4-201ENST00000317610 ABCD1P33897 745 aa20.14■□□□□ 0.81
RTN4-201ENST00000317610 RAD23BP54727 409 aa20.14■□□□□ 0.81
RTN4-201ENST00000317610 GPX6P59796 221 aa20.14■□□□□ 0.81
RTN4-201ENST00000317610 RPS6P62753 249 aaKnown RBP20.14■□□□□ 0.81
RTN4-201ENST00000317610 ZNF252P-AS1Q0IIN9 211 aa20.14■□□□□ 0.81
RTN4-201ENST00000317610 PTPRJQ12913 1337 aa20.14■□□□□ 0.81
RTN4-201ENST00000317610 CTC1Q2NKJ3 1217 aa20.14■□□□□ 0.81
RTN4-201ENST00000317610 TAF1BQ53T94 588 aaPredicted RBP20.14■□□□□ 0.81
RTN4-201ENST00000317610 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.14■□□□□ 0.811e-6■■■■■ 116
RTN4-201ENST00000317610 ZNF276Q8N554 614 aa20.14■□□□□ 0.81
RTN4-201ENST00000317610 RBBP8NLQ8NC74 664 aaPredicted RBP20.14■□□□□ 0.81
RTN4-201ENST00000317610 MICAL1Q8TDZ2 1067 aa20.14■□□□□ 0.81
RTN4-201ENST00000317610 BICD1Q96G01 975 aa20.14■□□□□ 0.81
RTN4-201ENST00000317610 NUDCD1Q96RS6 583 aa20.14■□□□□ 0.81
RTN4-201ENST00000317610 XPNPEP1Q9NQW7 623 aa20.14■□□□□ 0.81
RTN4-201ENST00000317610 FARP1Q9Y4F1 1045 aaPredicted RBP20.14■□□□□ 0.81
RTN4-201ENST00000317610 CLUHO75153 1309 aa20.13■□□□□ 0.81
RTN4-201ENST00000317610 hCG_1818297A0A087WSY0 165 aa20.13■□□□□ 0.81
RTN4-201ENST00000317610 TCRBV5S1A1TA0A578 114 aa20.13■□□□□ 0.81
RTN4-201ENST00000317610 H0YCG3 227 aa20.13■□□□□ 0.81
RTN4-201ENST00000317610 MYCLP12524 364 aaPredicted RBP20.13■□□□□ 0.81
RTN4-201ENST00000317610 ATF7P17544 494 aaPredicted RBP20.13■□□□□ 0.81
RTN4-201ENST00000317610 TNNI1P19237 187 aa20.13■□□□□ 0.81
RTN4-201ENST00000317610 MMP8P22894 467 aa20.13■□□□□ 0.81
RTN4-201ENST00000317610 GEMIN4P57678 1058 aaKnown RBP20.13■□□□□ 0.81
RTN4-201ENST00000317610 RPL7AP62424 266 aaKnown RBP20.13■□□□□ 0.81
RTN4-201ENST00000317610 PDIA2Q13087 525 aaKnown RBP20.13■□□□□ 0.81
RTN4-201ENST00000317610 HP1BP3Q5SSJ5 553 aaPredicted RBP20.13■□□□□ 0.81
RTN4-201ENST00000317610 ZNF449Q6P9G9 518 aa20.13■□□□□ 0.81
RTN4-201ENST00000317610 FBXO41Q8TF61 875 aa20.13■□□□□ 0.81
RTN4-201ENST00000317610 PXMP2Q9NR77 195 aa20.13■□□□□ 0.81
RTN4-201ENST00000317610 RABGEF1Q9UJ41 708 aa20.13■□□□□ 0.81
RTN4-201ENST00000317610 ZFP69BQ9UJL9 534 aa20.13■□□□□ 0.81
RTN4-201ENST00000317610 ZMYND8Q9ULU4 1186 aaPredicted RBP20.13■□□□□ 0.81
RTN4-201ENST00000317610 IVNS1ABPQ9Y6Y0 642 aa20.13■□□□□ 0.81
RTN4-201ENST00000317610 DGAT1O75907 488 aa20.13■□□□□ 0.81
RTN4-201ENST00000317610 RXRBP28702 533 aa20.13■□□□□ 0.81
RTN4-201ENST00000317610 IRX1P78414 480 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms