RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 GFRA3O60609 400 aa19.14■□□□□ 0.65
TPM1-203ENST00000317516 VNN2O95498 520 aa19.14■□□□□ 0.65
TPM1-203ENST00000317516 DCNP07585 359 aaKnown RBP19.14■□□□□ 0.65
TPM1-203ENST00000317516 RBP5P82980 135 aa19.14■□□□□ 0.65
TPM1-203ENST00000317516 DNAJB7Q7Z6W7 309 aaPredicted RBP19.14■□□□□ 0.65
TPM1-203ENST00000317516 LRRC52Q8N7C0 313 aa19.14■□□□□ 0.65
TPM1-203ENST00000317516 OR10T2Q8NGX3 314 aa19.14■□□□□ 0.65
TPM1-203ENST00000317516 FAM200AQ8TCP9 573 aa19.14■□□□□ 0.65
TPM1-203ENST00000317516 IRF7Q92985 503 aa19.14■□□□□ 0.65
TPM1-203ENST00000317516 PSMG2Q969U7 264 aa19.14■□□□□ 0.65
TPM1-203ENST00000317516 BORCS6Q96GS4 357 aa19.14■□□□□ 0.65
TPM1-203ENST00000317516 TMEM209Q96SK2 561 aa19.14■□□□□ 0.65
TPM1-203ENST00000317516 FGFBP2Q9BYJ0 223 aa19.14■□□□□ 0.65
TPM1-203ENST00000317516 OSBPL6Q9BZF3 934 aa19.14■□□□□ 0.65
TPM1-203ENST00000317516 PLA2G2FQ9BZM2 168 aa19.14■□□□□ 0.65
TPM1-203ENST00000317516 CRISPLD1Q9H336 500 aa19.14■□□□□ 0.65
TPM1-203ENST00000317516 BRD9Q9H8M2 597 aa19.14■□□□□ 0.65
TPM1-203ENST00000317516 ITGA11Q9UKX5 1188 aa19.14■□□□□ 0.65
TPM1-203ENST00000317516 MRPS17Q9Y2R5 130 aaKnown RBP19.14■□□□□ 0.65
TPM1-203ENST00000317516 NCAM2O15394 837 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 HUS1O60921 280 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 MOSPD3O75425 235 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 ITGB3P05106 788 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 TMEM191BP0C7N4 346 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 PSMC3P17980 439 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 POLR2BP30876 1174 aaKnown RBP19.13■□□□□ 0.65
TPM1-203ENST00000317516 TEAD2Q15562 447 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 TAF12Q16514 161 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 MGAT5BQ3V5L5 792 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 FAM26FQ5R3K3 315 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 ZNF852Q6ZMS4 543 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 C1orf127Q8N9H9 656 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 ZSCAN18Q8TBC5 510 aaPredicted RBP19.13■□□□□ 0.65
TPM1-203ENST00000317516 ZNF507Q8TCN5 953 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 SPPL2BQ8TCT7 592 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 DEPDC1BQ8WUY9 529 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 DNASE1L2Q92874 299 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 ANKRD36BP1Q96IX9 119 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 ZSWIM3Q96MP5 696 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 SEPT5Q99719 369 aaPredicted RBP19.13■□□□□ 0.65
TPM1-203ENST00000317516 DDX23Q9BUQ8 820 aaKnown RBP19.13■□□□□ 0.65
TPM1-203ENST00000317516 BCO2Q9BYV7 579 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 FOXQ1Q9C009 403 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 DNAJC25Q9H1X3 360 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 TRPV4Q9HBA0 871 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 PDE11AQ9HCR9 933 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 PCDHA7Q9UN72 937 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 DOCK6Q96HP0 2047 aa19.13■□□□□ 0.65
TPM1-203ENST00000317516 A0A1W2PRU2 124 aa19.12■□□□□ 0.65
TPM1-203ENST00000317516 FAM170BA6NMN3 283 aa19.12■□□□□ 0.65
TPM1-203ENST00000317516 KRT19P08727 400 aa19.12■□□□□ 0.65
TPM1-203ENST00000317516 GJA1P17302 382 aa19.12■□□□□ 0.65
TPM1-203ENST00000317516 FCARP24071 287 aa19.12■□□□□ 0.65
TPM1-203ENST00000317516 SNRPFP62306 86 aaKnown RBP19.12■□□□□ 0.65
TPM1-203ENST00000317516 TSPY1Q01534 308 aa19.12■□□□□ 0.65
TPM1-203ENST00000317516 UBXN2BQ14CS0 331 aa19.12■□□□□ 0.65
TPM1-203ENST00000317516 ARHGAP15Q53QZ3 475 aa19.12■□□□□ 0.65
TPM1-203ENST00000317516 POTEHQ6S545 545 aa19.12■□□□□ 0.65
TPM1-203ENST00000317516 UNC13DQ70J99 1090 aa19.12■□□□□ 0.65
TPM1-203ENST00000317516 TMEM86AQ8N2M4 240 aa19.12■□□□□ 0.65
TPM1-203ENST00000317516 SPRYD3Q8NCJ5 442 aa19.12■□□□□ 0.65
TPM1-203ENST00000317516 ZSWIM2Q8NEG5 633 aa19.12■□□□□ 0.65
TPM1-203ENST00000317516 SHKBP1Q8TBC3 707 aa19.12■□□□□ 0.65
TPM1-203ENST00000317516 HPS3Q969F9 1004 aa19.12■□□□□ 0.65
TPM1-203ENST00000317516 LRRC3Q9BY71 257 aa19.12■□□□□ 0.65
TPM1-203ENST00000317516 DLGAP2Q9P1A6 1054 aa19.12■□□□□ 0.65
TPM1-203ENST00000317516 PVALEFA0A1B0GWK0 134 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 MAN2B1O00754 1011 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 TNNC2P02585 160 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 MAGEA9P43362 315 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 WNT7BP56706 349 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 MYL7Q01449 175 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 BFSP1Q12934 665 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 MYO1EQ12965 1108 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 GRM2Q14416 872 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 NFE2Q16621 373 aaPredicted RBP19.11■□□□□ 0.65
TPM1-203ENST00000317516 DUOXA2Q1HG44 320 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 TPRG1Q6ZUI0 275 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 TMC8Q8IU68 726 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 C1orf210Q8IVY1 113 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 YAF2Q8IY57 180 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 CEP57L1Q8IYX8 460 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 SPATA18Q8TC71 538 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 NKD2Q969F2 451 aaPredicted RBP19.11■□□□□ 0.65
TPM1-203ENST00000317516 GCNAQ96QF7 691 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 ACBD6Q9BR61 282 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 ATXN3LQ9H3M9 355 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 TRPV5Q9NQA5 729 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 GDAP2Q9NXN4 497 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 HSPBP1Q9NZL4 362 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 RCOR1Q9UKL0 485 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 PCDHB5Q9Y5E4 795 aa19.11■□□□□ 0.65
TPM1-203ENST00000317516 PDCD11Q14690 1871 aaKnown RBP19.1■□□□□ 0.65
TPM1-203ENST00000317516 ZNF263O14978 683 aa19.1■□□□□ 0.65
TPM1-203ENST00000317516 SOAT2O75908 522 aa19.1■□□□□ 0.65
TPM1-203ENST00000317516 GABRR2P28476 465 aa19.1■□□□□ 0.65
TPM1-203ENST00000317516 GDI1P31150 447 aa19.1■□□□□ 0.65
TPM1-203ENST00000317516 VIPR2P41587 438 aa19.1■□□□□ 0.65
TPM1-203ENST00000317516 DNM1Q05193 864 aaKnown RBP19.1■□□□□ 0.65
TPM1-203ENST00000317516 RESP18Q5W5W9 173 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms