RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 VN1R2Q8NFZ6 395 aa18.76■□□□□ 0.59
SWSAP1-201ENST00000312423 TAF4BQ92750 862 aa18.76■□□□□ 0.59
SWSAP1-201ENST00000312423 HLA-CQ95604 372 aa18.76■□□□□ 0.59
SWSAP1-201ENST00000312423 RAB20Q9NX57 234 aa18.76■□□□□ 0.59
SWSAP1-201ENST00000312423 BARX2Q9UMQ3 279 aaPredicted RBP18.76■□□□□ 0.59
SWSAP1-201ENST00000312423 REV3LO60673 3130 aa18.76■□□□□ 0.59
SWSAP1-201ENST00000312423 ASS1P00966 412 aaKnown RBP18.75■□□□□ 0.59
SWSAP1-201ENST00000312423 NOP14P78316 857 aaKnown RBP18.75■□□□□ 0.59
SWSAP1-201ENST00000312423 CETN1Q12798 172 aa18.75■□□□□ 0.59
SWSAP1-201ENST00000312423 ADAM15Q13444 863 aa18.75■□□□□ 0.59
SWSAP1-201ENST00000312423 WDR44Q5JSH3 913 aa18.75■□□□□ 0.59
SWSAP1-201ENST00000312423 CASP10Q92851 521 aa18.75■□□□□ 0.59
SWSAP1-201ENST00000312423 SEMA4DQ92854 862 aa18.75■□□□□ 0.59
SWSAP1-201ENST00000312423 FUCA2Q9BTY2 467 aa18.75■□□□□ 0.59
SWSAP1-201ENST00000312423 OXCT2Q9BYC2 517 aaPredicted RBP18.75■□□□□ 0.59
SWSAP1-201ENST00000312423 UBE2ZQ9H832 354 aaPredicted RBP18.75■□□□□ 0.59
SWSAP1-201ENST00000312423 VRTNQ9H8Y1 702 aa18.75■□□□□ 0.59
SWSAP1-201ENST00000312423 OR6C75A6NL08 312 aa18.74■□□□□ 0.59
SWSAP1-201ENST00000312423 PES1O00541 588 aaKnown RBP18.74■□□□□ 0.59
SWSAP1-201ENST00000312423 TGM5O43548 720 aa18.74■□□□□ 0.59
SWSAP1-201ENST00000312423 GLP2RO95838 553 aa18.74■□□□□ 0.59
SWSAP1-201ENST00000312423 OR4Q2P0C623 313 aa18.74■□□□□ 0.59
SWSAP1-201ENST00000312423 KCNA5P22460 613 aa18.74■□□□□ 0.59
SWSAP1-201ENST00000312423 ZNF165P49910 485 aa18.74■□□□□ 0.59
SWSAP1-201ENST00000312423 ROR1Q01973 937 aa18.74■□□□□ 0.59
SWSAP1-201ENST00000312423 SLC8B1Q6J4K2 584 aa18.74■□□□□ 0.59
SWSAP1-201ENST00000312423 ELMSAN1Q6PJG2 1045 aa18.74■□□□□ 0.59
SWSAP1-201ENST00000312423 DPH6Q7L8W6 267 aa18.74■□□□□ 0.59
SWSAP1-201ENST00000312423 SLC22A17Q8WUG5 538 aa18.74■□□□□ 0.59
SWSAP1-201ENST00000312423 RBSNQ9H1K0 784 aa18.74■□□□□ 0.59
SWSAP1-201ENST00000312423 SNX25Q9H3E2 840 aa18.74■□□□□ 0.59
SWSAP1-201ENST00000312423 PRDM6Q9NQX0 595 aa18.74■□□□□ 0.59
SWSAP1-201ENST00000312423 MAN1C1Q9NR34 630 aa18.74■□□□□ 0.59
SWSAP1-201ENST00000312423 FANCLQ9NW38 375 aa18.74■□□□□ 0.59
SWSAP1-201ENST00000312423 DDX43Q9NXZ2 648 aaKnown RBP18.74■□□□□ 0.59
SWSAP1-201ENST00000312423 TBC1D4O60343 1298 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 LRRN2O75325 713 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 TBX10O75333 385 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 LHX1P48742 406 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 RAB33AQ14088 237 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 CTC1Q2NKJ3 1217 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 SMYD3Q9H7B4 428 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 EYSQ5T1H1 3165 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 H3BQ06 376 aaPredicted RBP18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 ACAT1P24752 427 aaKnown RBP18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 EEF1GP26641 437 aaKnown RBP18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 RAP1GAPP47736 663 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 DLX2Q07687 328 aaPredicted RBP18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 CLUL1Q15846 466 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 MAN2A1Q16706 1144 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 TCP11X2Q5H9J9 407 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 OSTM1Q86WC4 334 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 OR6B3Q8NGW1 331 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 OR10T2Q8NGX3 314 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 TMEM209Q96SK2 561 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 BPIFA3Q9BQP9 254 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 MRPL45Q9BRJ2 306 aaKnown RBP18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 TUBGCP2Q9BSJ2 902 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 NIF3L1Q9GZT8 377 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 DZANK1Q9NVP4 752 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 DPP7Q9UHL4 492 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 COG5Q9UP83 839 aa18.73■□□□□ 0.59
SWSAP1-201ENST00000312423 WDR27A2RRH5 827 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 SMTNL1A8MU46 457 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 BECN2A8MW95 431 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 ESPNB1AK53 854 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 WARSP23381 471 aaKnown RBP18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 PCSK1P29120 753 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 CDH8P55286 799 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 TSPY1Q01534 308 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 LRMPQ12912 555 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 KCNC3Q14003 757 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 COL19A1Q14993 1142 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 LIN9Q5TKA1 542 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 KREMEN2Q8NCW0 462 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 ANKRD20A12PQ8NF67 263 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 SPATA18Q8TC71 538 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 KBTBD7Q8WVZ9 684 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 PDLIM2Q96JY6 352 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 PGLYRP2Q96PD5 576 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 RTP3Q9BQQ7 232 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 APOL5Q9BWW9 433 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 APOBEC3GQ9HC16 384 aaKnown RBP18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 COQ4Q9Y3A0 265 aa18.72■□□□□ 0.59
SWSAP1-201ENST00000312423 P4HA2O15460 535 aa18.71■□□□□ 0.59
SWSAP1-201ENST00000312423 HCRTO43612 131 aa18.71■□□□□ 0.59
SWSAP1-201ENST00000312423 TACC1O75410 805 aa18.71■□□□□ 0.59
SWSAP1-201ENST00000312423 TPM2P07951 284 aa18.71■□□□□ 0.59
SWSAP1-201ENST00000312423 PDGFRBP09619 1106 aa18.71■□□□□ 0.59
SWSAP1-201ENST00000312423 CDK11BP21127 795 aaKnown RBP18.71■□□□□ 0.59
SWSAP1-201ENST00000312423 ELF1P32519 619 aa18.71■□□□□ 0.59
SWSAP1-201ENST00000312423 GNL1P36915 607 aaPredicted RBP18.71■□□□□ 0.59
SWSAP1-201ENST00000312423 LTBRP36941 435 aa18.71■□□□□ 0.59
SWSAP1-201ENST00000312423 CDR1P51861 262 aa18.71■□□□□ 0.59
SWSAP1-201ENST00000312423 SLC39A12Q504Y0 691 aa18.71■□□□□ 0.59
SWSAP1-201ENST00000312423 CDKAL1Q5VV42 579 aa18.71■□□□□ 0.59
SWSAP1-201ENST00000312423 ANKRD54Q6NXT1 300 aa18.71■□□□□ 0.59
SWSAP1-201ENST00000312423 LILRA6Q6PI73 481 aa18.71■□□□□ 0.59
SWSAP1-201ENST00000312423 TMEM184AQ6ZMB5 413 aa18.71■□□□□ 0.59
SWSAP1-201ENST00000312423 LIMS2Q7Z4I7 341 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms