RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 PDCD2Q16342 344 aaPredicted RBP15.47■□□□□ 0.07
COL6A2-202ENST00000310645 EAPPQ56P03 285 aaPredicted RBP15.47■□□□□ 0.07
COL6A2-202ENST00000310645 IZUMO2Q6UXV1 221 aa15.47■□□□□ 0.07
COL6A2-202ENST00000310645 CENPUQ71F23 418 aa15.47■□□□□ 0.07
COL6A2-202ENST00000310645 SLC25A41Q8N5S1 370 aa15.47■□□□□ 0.07
COL6A2-202ENST00000310645 CDCA7Q9BWT1 371 aaPredicted RBP15.47■□□□□ 0.07
COL6A2-202ENST00000310645 G3BP2Q9UN86 482 aaKnown RBP15.47■□□□□ 0.07
COL6A2-202ENST00000310645 KAT6AQ92794 2004 aa15.47■□□□□ 0.07
COL6A2-202ENST00000310645 G3V3G9 751 aa15.47■□□□□ 0.07
COL6A2-202ENST00000310645 IPO5O00410 1097 aaKnown RBP15.47■□□□□ 0.07
COL6A2-202ENST00000310645 GSTA2P09210 222 aa15.47■□□□□ 0.07
COL6A2-202ENST00000310645 SLC1A1P43005 524 aa15.47■□□□□ 0.07
COL6A2-202ENST00000310645 DYNLT1P63172 113 aa15.47■□□□□ 0.07
COL6A2-202ENST00000310645 AP1B1Q10567 949 aa15.47■□□□□ 0.07
COL6A2-202ENST00000310645 CEP55Q53EZ4 464 aa15.47■□□□□ 0.07
COL6A2-202ENST00000310645 SYCP2LQ5T4T6 812 aa15.47■□□□□ 0.07
COL6A2-202ENST00000310645 DCAF8Q5TAQ9 597 aa15.47■□□□□ 0.07
COL6A2-202ENST00000310645 APLFQ8IW19 511 aaPredicted RBP15.47■□□□□ 0.07
COL6A2-202ENST00000310645 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.47■□□□□ 0.07
COL6A2-202ENST00000310645 SH3TC2Q8TF17 1288 aa15.47■□□□□ 0.07
COL6A2-202ENST00000310645 PYROXD1Q8WU10 500 aa15.47■□□□□ 0.07
COL6A2-202ENST00000310645 SAE1Q9UBE0 346 aaPredicted RBP15.47■□□□□ 0.07
COL6A2-202ENST00000310645 USP1O94782 785 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 MYL2P10916 166 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 GEMIN4P57678 1058 aaKnown RBP15.46■□□□□ 0.07
COL6A2-202ENST00000310645 KDSRQ06136 332 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 NFX1Q12986 1120 aaKnown RBP15.46■□□□□ 0.07
COL6A2-202ENST00000310645 CFAP157Q5JU67 520 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 C3orf62Q6ZUJ4 267 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 MIER3Q7Z3K6 550 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 ARHGAP22Q7Z5H3 698 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 ZFAND2BQ8WV99 257 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 MKL1Q969V6 931 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 PTCD3Q96EY7 689 aaKnown RBP15.46■□□□□ 0.07
COL6A2-202ENST00000310645 TEKT3Q9BXF9 490 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 TLR3O15455 904 aaKnown RBP15.46■□□□□ 0.07
COL6A2-202ENST00000310645 BGNP21810 368 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 WDR72Q3MJ13 1102 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 FAM102BQ5T8I3 360 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 MFSD7Q6UXD7 560 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 ALYREFQ86V81 257 aaKnown RBP15.46■□□□□ 0.07
COL6A2-202ENST00000310645 FBXO27Q8NI29 283 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 IFT43Q96FT9 208 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 FAM111AQ96PZ2 611 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 PAFAH2Q99487 392 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 STRA6Q9BX79 667 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 NYAP2Q9P242 653 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 STX18Q9P2W9 335 aaKnown RBP15.46■□□□□ 0.07
COL6A2-202ENST00000310645 PRR12Q9ULL5 1215 aa15.46■□□□□ 0.07
COL6A2-202ENST00000310645 RPL26L1Q9UNX3 145 aaKnown RBP15.46■□□□□ 0.07
COL6A2-202ENST00000310645 FAM237BA0A1B0GVD1 139 aa15.46■□□□□ 0.06
COL6A2-202ENST00000310645 KRT1P04264 644 aa15.46■□□□□ 0.06
COL6A2-202ENST00000310645 BBS9Q3SYG4 887 aa15.46■□□□□ 0.06
COL6A2-202ENST00000310645 SV2AQ7L0J3 742 aa15.46■□□□□ 0.06
COL6A2-202ENST00000310645 GATA6Q92908 595 aa15.46■□□□□ 0.06
COL6A2-202ENST00000310645 TRAPPC9Q96Q05 1148 aa15.46■□□□□ 0.06
COL6A2-202ENST00000310645 GINM1Q9NU53 330 aa15.46■□□□□ 0.06
COL6A2-202ENST00000310645 ATRNL1Q5VV63 1379 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 FCHO1O14526 889 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 LIASO43766 372 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 HNRNPCL1O60812 293 aaKnown RBP15.45■□□□□ 0.06
COL6A2-202ENST00000310645 LYNP07948 512 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 ARL4CP56559 192 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 GPX6P59796 221 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 CEP128Q6ZU80 1094 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 C15orf52Q6ZUT6 534 aaKnown RBP15.45■□□□□ 0.06
COL6A2-202ENST00000310645 NLRX1Q86UT6 975 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 TDRPQ86YL5 185 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 RHPN2Q8IUC4 686 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 RELL1Q8IUW5 271 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 TUBGCP5Q96RT8 1024 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 NMUR2Q9GZQ4 415 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 GOLGB1Q14789 3259 aaKnown RBP15.45■□□□□ 0.06
COL6A2-202ENST00000310645 POLR2MP0CAP2 368 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 KITP10721 976 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 UNGP13051 313 aaPredicted RBP15.45■□□□□ 0.06
COL6A2-202ENST00000310645 HIF1AQ16665 826 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 SLC5A9Q2M3M2 681 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 THTPAQ9BU02 230 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 CCNL1Q9UK58 526 aaPredicted RBP15.45■□□□□ 0.06
COL6A2-202ENST00000310645 UMODL1Q5DID0 1318 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 CNTNAP4Q9C0A0 1308 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 LPXNO60711 386 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 CDK16Q00536 496 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 MCL1Q07820 350 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 MYBPC2Q14324 1141 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 ZYXQ15942 572 aaKnown RBP15.45■□□□□ 0.06
COL6A2-202ENST00000310645 LRRC23Q53EV4 343 aaPredicted RBP15.45■□□□□ 0.06
COL6A2-202ENST00000310645 LIN9Q5TKA1 542 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 SPOPLQ6IQ16 392 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 PALM2Q8IXS6 379 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 WDR11Q9BZH6 1224 aa15.45■□□□□ 0.06
COL6A2-202ENST00000310645 UBE2OQ9C0C9 1292 aaKnown RBP15.45■□□□□ 0.06
COL6A2-202ENST00000310645 PPARGC1AQ9UBK2 798 aaKnown RBP15.45■□□□□ 0.06
COL6A2-202ENST00000310645 ALOX15BO15296 676 aa15.44■□□□□ 0.06
COL6A2-202ENST00000310645 GH2P01242 217 aa15.44■□□□□ 0.06
COL6A2-202ENST00000310645 MT-ND3P03897 115 aa15.44■□□□□ 0.06
COL6A2-202ENST00000310645 DSG3P32926 999 aa15.44■□□□□ 0.06
COL6A2-202ENST00000310645 LMNB2Q03252 620 aa15.44■□□□□ 0.06
COL6A2-202ENST00000310645 RASA2Q15283 850 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms