RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 TASP1Q9H6P5 420 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 BCS1LQ9Y276 419 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 ARHGEF1Q92888 912 aaKnown RBP13.75□□□□□ -0.21
SNED1-201ENST00000310397 BEGAINQ9BUH8 593 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 GPBP1L1Q9HC44 474 aaPredicted RBP13.75□□□□□ -0.21
SNED1-201ENST00000310397 ATP11BQ9Y2G3 1177 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 PPP1R36Q96LQ0 422 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 ILKAPQ9H0C8 392 aaPredicted RBP13.75□□□□□ -0.21
SNED1-201ENST00000310397 DCDC2Q9UHG0 476 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 PCDHGB4Q9UN71 923 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 GON4LQ3T8J9 2241 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 TRPC5OSA6NMA1 111 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 NEMP1O14524 444 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 CST8O60676 142 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 CACNB3P54284 484 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 PDK1Q15118 436 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 SLC24A2Q9UI40 661 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 LRCH1Q9Y2L9 728 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 M0R3G1 203 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 MAFGO15525 162 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 PJA2O43164 708 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 ANO4Q32M45 955 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 TWF2Q6IBS0 349 aaKnown RBP13.75□□□□□ -0.21
SNED1-201ENST00000310397 PATL1Q86TB9 770 aaKnown RBP13.75□□□□□ -0.21
SNED1-201ENST00000310397 PRPF18Q99633 342 aaKnown RBP13.75□□□□□ -0.21
SNED1-201ENST00000310397 THAP2Q9H0W7 228 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 GGA2Q9UJY4 613 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 MYH2Q9UKX2 1941 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 A8MXQ7 604 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 FSBPO95073 299 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 TOB1P50616 345 aaPredicted RBP13.75□□□□□ -0.21
SNED1-201ENST00000310397 JADE3Q92613 823 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 UBOX5O94941 541 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 KRT75O95678 551 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 MUTP22033 750 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 CNTFP26441 200 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 YTHDF3Q7Z739 585 aaKnown RBP13.75□□□□□ -0.21
SNED1-201ENST00000310397 LDHDQ86WU2 507 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 LZICQ8WZA0 190 aa13.75□□□□□ -0.21
SNED1-201ENST00000310397 TLR2O60603 784 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 IL18RAPO95256 599 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 NFX1Q12986 1120 aaKnown RBP13.74□□□□□ -0.21
SNED1-201ENST00000310397 EP400NLQ6ZTU2 488 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 KIF12Q96FN5 646 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 OTUB1Q96FW1 271 aaPredicted RBP13.74□□□□□ -0.21
SNED1-201ENST00000310397 RIT2Q99578 217 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 EGFL8Q99944 293 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 COPB2P35606 906 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 NUP107P57740 925 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 KRR1Q13601 381 aaKnown RBP13.74□□□□□ -0.21
SNED1-201ENST00000310397 LPAR1Q92633 364 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 KLHL4Q9C0H6 718 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 CEMIPQ8WUJ3 1361 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 RPS6KA5O75582 802 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 PSMC3P17980 439 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 PTPN4P29074 926 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 ERFP50548 548 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 FAM49AQ9H0Q0 323 aaPredicted RBP13.74□□□□□ -0.21
SNED1-201ENST00000310397 ACAD9Q9H845 621 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 AGPAT3Q9NRZ7 376 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 GTF2H1P32780 548 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 RFX5P48382 616 aaPredicted RBP13.74□□□□□ -0.21
SNED1-201ENST00000310397 EFL1Q7Z2Z2 1120 aaKnown RBP13.74□□□□□ -0.21
SNED1-201ENST00000310397 EXTL3O43909 919 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 KCNA2P16389 499 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 SSTR3P32745 418 aaPredicted RBP13.74□□□□□ -0.21
SNED1-201ENST00000310397 SKOR1P84550 965 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 TBX2Q13207 712 aaPredicted RBP13.74□□□□□ -0.21
SNED1-201ENST00000310397 USP10Q14694 798 aaKnown RBP13.74□□□□□ -0.21
SNED1-201ENST00000310397 CCNJLQ8IV13 435 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 C1orf131Q8NDD1 294 aaKnown RBP13.74□□□□□ -0.21
SNED1-201ENST00000310397 ATXN2LQ8WWM7 1075 aaKnown RBP13.74□□□□□ -0.21
SNED1-201ENST00000310397 TDRD3Q9H7E2 651 aaKnown RBP13.74□□□□□ -0.21
SNED1-201ENST00000310397 DTNAQ9Y4J8 743 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 UBA6A0AVT1 1052 aaPredicted RBP13.74□□□□□ -0.21
SNED1-201ENST00000310397 GLI1P08151 1106 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 PSMA4P25789 261 aaKnown RBP13.74□□□□□ -0.21
SNED1-201ENST00000310397 RBP5P82980 135 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 C11orf63Q6NUN7 778 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 TTC33Q6PID6 262 aaPredicted RBP13.74□□□□□ -0.21
SNED1-201ENST00000310397 CNDP1Q96KN2 507 aa13.74□□□□□ -0.21
SNED1-201ENST00000310397 CDC42EP4Q9H3Q1 356 aaKnown RBP13.74□□□□□ -0.21
SNED1-201ENST00000310397 GOLGA8TH3BQL2 631 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 ALBP02768 609 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 RAP1GDS1P52306 607 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 MRPL28Q13084 256 aaKnown RBP13.73□□□□□ -0.21
SNED1-201ENST00000310397 FBXO25Q8TCJ0 367 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 FAR2Q96K12 515 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 GPR101Q96P66 508 aaPredicted RBP13.73□□□□□ -0.21
SNED1-201ENST00000310397 ACOT2P49753 483 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 CDC42EP1Q00587 391 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 WASHC2DQ5SRD0 308 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 PPP1R16BQ96T49 567 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 LRFN2Q9ULH4 789 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 F5H423 210 aaPredicted RBP13.73□□□□□ -0.21
SNED1-201ENST00000310397 ATP6V1B1P15313 513 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 DDHD1Q8NEL9 900 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 CCDC126Q96EE4 140 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 SARS2Q9NP81 518 aaKnown RBP13.73□□□□□ -0.21
SNED1-201ENST00000310397 SCN3BQ9NY72 215 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms