RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 TWNKQ96RR1 684 aa24■■□□□ 1.43
IRF3-201ENST00000309877 NT5C1AQ9BXI3 368 aa24■■□□□ 1.43
IRF3-201ENST00000309877 THAP2Q9H0W7 228 aa24■■□□□ 1.43
IRF3-201ENST00000309877 TMEM161AQ9NX61 479 aa24■■□□□ 1.43
IRF3-201ENST00000309877 CASTOR2A6NHX0 329 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 CYP1A1P04798 512 aaPredicted RBP23.99■■□□□ 1.43
IRF3-201ENST00000309877 CLTBP09497 229 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 UNGP13051 313 aaPredicted RBP23.99■■□□□ 1.43
IRF3-201ENST00000309877 NSFP46459 744 aaKnown RBP23.99■■□□□ 1.43
IRF3-201ENST00000309877 CLCNKBP51801 687 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 GPC5P78333 572 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 LRRC26Q2I0M4 334 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 SOWAHAQ2M3V2 549 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 NAA35Q5VZE5 725 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 PASD1Q8IV76 773 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 URGCPQ8TCY9 931 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 CPA5Q8WXQ8 436 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 DDX27Q96GQ7 796 aaKnown RBP23.99■■□□□ 1.43
IRF3-201ENST00000309877 HEXIM2Q96MH2 286 aaKnown RBP23.99■■□□□ 1.43
IRF3-201ENST00000309877 NAPGQ99747 312 aaPredicted RBP23.99■■□□□ 1.43
IRF3-201ENST00000309877 TBX21Q9UL17 535 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 FANCGO15287 622 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 INPPL1O15357 1258 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 CXCL10P02778 98 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 CFHP08603 1231 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 PPP1R2P3Q6NXS1 205 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 OR6B3Q8NGW1 331 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 TFAP2BQ92481 460 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 ELAC1Q9H777 363 aaKnown RBP23.99■■□□□ 1.43
IRF3-201ENST00000309877 CACNG4Q9UBN1 327 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 KIAA1257Q9ULG3 409 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 PCDHB7Q9Y5E2 793 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 CAPN6Q9Y6Q1 641 aa23.99■■□□□ 1.43
IRF3-201ENST00000309877 NCANO14594 1321 aa23.98■■□□□ 1.43
IRF3-201ENST00000309877 VDRP11473 427 aa23.98■■□□□ 1.43
IRF3-201ENST00000309877 TUSC3Q13454 348 aa23.98■■□□□ 1.43
IRF3-201ENST00000309877 DEFB128Q7Z7B8 93 aa23.98■■□□□ 1.43
IRF3-201ENST00000309877 RFFLQ8WZ73 363 aa23.98■■□□□ 1.43
IRF3-201ENST00000309877 UROC1Q96N76 676 aa23.98■■□□□ 1.43
IRF3-201ENST00000309877 DNAI2Q9GZS0 605 aa23.98■■□□□ 1.43
IRF3-201ENST00000309877 SNX25Q9H3E2 840 aa23.98■■□□□ 1.43
IRF3-201ENST00000309877 LRFN2Q9ULH4 789 aa23.98■■□□□ 1.43
IRF3-201ENST00000309877 PCDHGC3Q9UN70 934 aa23.98■■□□□ 1.43
IRF3-201ENST00000309877 CEP83Q9Y592 693 aa23.98■■□□□ 1.43
IRF3-201ENST00000309877 CYB561D2O14569 222 aa23.97■■□□□ 1.43
IRF3-201ENST00000309877 URI1O94763 535 aaPredicted RBP23.97■■□□□ 1.43
IRF3-201ENST00000309877 LSM8O95777 96 aaKnown RBP23.97■■□□□ 1.43
IRF3-201ENST00000309877 NOMO3P69849 1222 aa23.97■■□□□ 1.43
IRF3-201ENST00000309877 CENPCQ03188 943 aa23.97■■□□□ 1.43
IRF3-201ENST00000309877 NOMO2Q5JPE7 1267 aa23.97■■□□□ 1.43
IRF3-201ENST00000309877 DPH6Q7L8W6 267 aa23.97■■□□□ 1.43
IRF3-201ENST00000309877 UNC93AQ86WB7 457 aa23.97■■□□□ 1.43
IRF3-201ENST00000309877 TOP6BLQ8N6T0 577 aa23.97■■□□□ 1.43
IRF3-201ENST00000309877 ZSWIM1Q9BR11 485 aa23.97■■□□□ 1.43
IRF3-201ENST00000309877 KANSL3Q9P2N6 904 aa23.97■■□□□ 1.43
IRF3-201ENST00000309877 SCN1AP35498 2009 aa23.97■■□□□ 1.43
IRF3-201ENST00000309877 A8MXQ7 604 aa23.96■■□□□ 1.43
IRF3-201ENST00000309877 FGFR1P11362 822 aa23.96■■□□□ 1.43
IRF3-201ENST00000309877 UPP1Q16831 310 aa23.96■■□□□ 1.43
IRF3-201ENST00000309877 SGO2Q562F6 1265 aa23.96■■□□□ 1.43
IRF3-201ENST00000309877 CLLU1OSQ5K130 101 aa23.96■■□□□ 1.43
IRF3-201ENST00000309877 RHOT2Q8IXI1 618 aa23.96■■□□□ 1.43
IRF3-201ENST00000309877 TMEM35BQ8NCS4 154 aa23.96■■□□□ 1.43
IRF3-201ENST00000309877 SLC35G2Q8TBE7 412 aa23.96■■□□□ 1.43
IRF3-201ENST00000309877 ZNF653Q96CK0 615 aa23.96■■□□□ 1.43
IRF3-201ENST00000309877 ARHGEF26Q96DR7 871 aa23.96■■□□□ 1.43
IRF3-201ENST00000309877 TRIM11Q96F44 468 aa23.96■■□□□ 1.43
IRF3-201ENST00000309877 L1RE1Q9UN81 338 aa23.96■■□□□ 1.43
IRF3-201ENST00000309877 GNL1P36915 607 aaPredicted RBP23.95■■□□□ 1.43
IRF3-201ENST00000309877 DSTYKQ6XUX3 929 aa23.95■■□□□ 1.43
IRF3-201ENST00000309877 ADGRF2Q8IZF7 708 aa23.95■■□□□ 1.43
IRF3-201ENST00000309877 ABI1Q8IZP0 508 aa23.95■■□□□ 1.43
IRF3-201ENST00000309877 RABGGTAQ92696 567 aa23.95■■□□□ 1.43
IRF3-201ENST00000309877 ZNF518BQ9C0D4 1074 aa23.95■■□□□ 1.43
IRF3-201ENST00000309877 CTTNBP2NLQ9P2B4 639 aa23.95■■□□□ 1.43
IRF3-201ENST00000309877 PALMO75781 387 aa23.95■■□□□ 1.42
IRF3-201ENST00000309877 FAM163BP0C2L3 166 aa23.95■■□□□ 1.42
IRF3-201ENST00000309877 TCTN1Q2MV58 587 aa23.95■■□□□ 1.42
IRF3-201ENST00000309877 LIMS2Q7Z4I7 341 aa23.95■■□□□ 1.42
IRF3-201ENST00000309877 MCOLN2Q8IZK6 566 aa23.95■■□□□ 1.42
IRF3-201ENST00000309877 PDCL2Q8N4E4 241 aa23.95■■□□□ 1.42
IRF3-201ENST00000309877 KBTBD7Q8WVZ9 684 aa23.95■■□□□ 1.42
IRF3-201ENST00000309877 SENP8Q96LD8 212 aa23.95■■□□□ 1.42
IRF3-201ENST00000309877 PAAF1Q9BRP4 392 aa23.95■■□□□ 1.42
IRF3-201ENST00000309877 MCOLN1Q9GZU1 580 aa23.95■■□□□ 1.42
IRF3-201ENST00000309877 RNF216Q9NWF9 866 aaPredicted RBP23.95■■□□□ 1.42
IRF3-201ENST00000309877 GTF3C4Q9UKN8 822 aa23.95■■□□□ 1.42
IRF3-201ENST00000309877 JRKLQ9Y4A0 524 aa23.95■■□□□ 1.42
IRF3-201ENST00000309877 MYBL1P10243 752 aa23.94■■□□□ 1.42
IRF3-201ENST00000309877 RFC2P35250 354 aa23.94■■□□□ 1.42
IRF3-201ENST00000309877 RNASELQ05823 741 aaKnown RBP23.94■■□□□ 1.42
IRF3-201ENST00000309877 CNGA2Q16280 664 aa23.94■■□□□ 1.42
IRF3-201ENST00000309877 ACOT1Q86TX2 421 aa23.94■■□□□ 1.42
IRF3-201ENST00000309877 PCDHGC5Q9Y5F6 944 aa23.94■■□□□ 1.42
IRF3-201ENST00000309877 ENC1O14682 589 aa23.93■■□□□ 1.42
IRF3-201ENST00000309877 B3GAT3O94766 335 aa23.93■■□□□ 1.42
IRF3-201ENST00000309877 CYP1A2P05177 515 aa23.93■■□□□ 1.42
IRF3-201ENST00000309877 PDGFRBP09619 1106 aa23.93■■□□□ 1.42
IRF3-201ENST00000309877 WARSP23381 471 aaKnown RBP23.93■■□□□ 1.42
IRF3-201ENST00000309877 PAX3P23760 479 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms