RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 H2AFVQ71UI9 128 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 ZNF598Q86UK7 904 aaKnown RBP7.43□□□□□ -1.22
PTCD2-201ENST00000308077 SECISBP2LQ93073 1101 aaKnown RBP7.43□□□□□ -1.22
PTCD2-201ENST00000308077 FAXDC2Q96IV6 333 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 TWNKQ96RR1 684 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 TSPAN18Q96SJ8 248 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 GAD1Q99259 594 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 ISCUQ9H1K1 167 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 LUC7LQ9NQ29 371 aaKnown RBP7.43□□□□□ -1.22
PTCD2-201ENST00000308077 MYO1AQ9UBC5 1043 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 CACNG4Q9UBN1 327 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 GIT1Q9Y2X7 761 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 NCANO14594 1321 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 TET1Q8NFU7 2136 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 ARL5CA6NH57 179 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 BTNL10A8MVZ5 291 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 RIOK3O14730 519 aaKnown RBP7.43□□□□□ -1.22
PTCD2-201ENST00000308077 SPTLC1O15269 473 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 CILPO75339 1184 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 COL6A1P12109 1028 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 HOXB3P14651 431 aaPredicted RBP7.43□□□□□ -1.22
PTCD2-201ENST00000308077 CYP3A5P20815 502 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 IBSPP21815 317 aaPredicted RBP7.43□□□□□ -1.22
PTCD2-201ENST00000308077 BRD2P25440 801 aaKnown RBP7.43□□□□□ -1.22
PTCD2-201ENST00000308077 CASQ1P31415 396 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 SCNN1GP51170 649 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 RAD23BP54727 409 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 BPIFB4P59827 614 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 ORC1Q13415 861 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 BFSP2Q13515 415 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 CLEC16AQ2KHT3 1053 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 TCTN1Q2MV58 587 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 TRIM60Q495X7 471 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 ANKRD33Q7Z3H0 272 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 ZNF677Q86XU0 584 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 ECHDC2Q86YB7 292 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 TXLNBQ8N3L3 684 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 LRRC52Q8N7C0 313 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 TFAP2BQ92481 460 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 ARHGEF26Q96DR7 871 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 ELOVL4Q9GZR5 314 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 THAP2Q9H0W7 228 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 RGS18Q9NS28 235 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 INTUQ9ULD6 942 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 NME7Q9Y5B8 376 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 ANKRD62A6NC57 917 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 C9IYK1 514 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 PITPNM1O00562 1244 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 TLR3O15455 904 aaKnown RBP7.42□□□□□ -1.22
PTCD2-201ENST00000308077 THAP12O43422 761 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 XPOTO43592 962 aaKnown RBP7.42□□□□□ -1.22
PTCD2-201ENST00000308077 RTN2O75298 545 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 FTLP02792 175 aaPredicted RBP7.42□□□□□ -1.22
PTCD2-201ENST00000308077 CYP1A1P04798 512 aaPredicted RBP7.42□□□□□ -1.22
PTCD2-201ENST00000308077 TMEM253P0C7T8 217 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 GZMAP12544 262 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 UNGP13051 313 aaPredicted RBP7.42□□□□□ -1.22
PTCD2-201ENST00000308077 ABCB4P21439 1286 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 LRPAP1P30533 357 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 YWHAEP62258 255 aaKnown RBP7.42□□□□□ -1.22
PTCD2-201ENST00000308077 TNNC1P63316 161 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 INCA1Q0VD86 236 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 FAAP100Q0VG06 881 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 MYO1EQ12965 1108 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 HACE1Q8IYU2 909 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 SLC4A11Q8NBS3 891 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 RNF169Q8NCN4 708 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 ZNF606Q8WXB4 792 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 CYFIP2Q96F07 1278 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 RPS6KC1Q96S38 1066 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 MRPL45Q9BRJ2 306 aaKnown RBP7.42□□□□□ -1.22
PTCD2-201ENST00000308077 RSAD1Q9HA92 442 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 CYP3A43Q9HB55 503 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 SNX9Q9Y5X1 595 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 NAV2Q8IVL1 2488 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 A0A0A6YYK5 440 aaPredicted RBP7.42□□□□□ -1.22
PTCD2-201ENST00000308077 ENC1O14682 589 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 ATMINO43313 823 aaPredicted RBP7.42□□□□□ -1.22
PTCD2-201ENST00000308077 ATP1A1P05023 1023 aaKnown RBP7.42□□□□□ -1.22
PTCD2-201ENST00000308077 THP07101 528 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 P4HA1P13674 534 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 GJA8P48165 433 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 NDST1P52848 882 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 NOMO3P69849 1222 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 TLE2Q04725 743 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 SOWAHAQ2M3V2 549 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 PLEKHG4Q58EX7 1191 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 SMYD5Q6GMV2 418 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 ACAD10Q6JQN1 1059 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 LIMS2Q7Z4I7 341 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 PASD1Q8IV76 773 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 RNF10Q8N5U6 811 aaKnown RBP7.42□□□□□ -1.22
PTCD2-201ENST00000308077 LRRN4CLQ8ND94 238 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 DBF4BQ8NFT6 615 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 CPA5Q8WXQ8 436 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 SCLYQ96I15 445 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 ZNF560Q96MR9 790 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 NOX5Q96PH1 765 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 MMS19Q96T76 1030 aa7.42□□□□□ -1.22
PTCD2-201ENST00000308077 NAPGQ99747 312 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms