RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 TSR3Q9UJK0 312 aaKnown RBP16.69■□□□□ 0.26
USP42-201ENST00000306177 UBQLN1Q9UMX0 589 aaKnown RBP16.69■□□□□ 0.26
USP42-201ENST00000306177 PLEKP08567 350 aaPredicted RBP16.68■□□□□ 0.26
USP42-201ENST00000306177 ERVK-24P63145 666 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 TTI2Q6NXR4 508 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 C4orf33Q8N1A6 199 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 ARL8AQ96BM9 186 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 ING2Q9H160 280 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 TRPC7Q9HCX4 862 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 ZNF197O14709 1029 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 EIF3HO15372 352 aaKnown RBP eCLIP16.68■□□□□ 0.26
USP42-201ENST00000306177 EEF1DP29692 281 aaKnown RBP16.68■□□□□ 0.26
USP42-201ENST00000306177 FOXD4Q12950 439 aaPredicted RBP16.68■□□□□ 0.26
USP42-201ENST00000306177 CUL3Q13618 768 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 REXO1L1PQ8IX06 675 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 PARP9Q8IXQ6 854 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 KIRREL3Q8IZU9 778 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 ADAM33Q9BZ11 813 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 FAM129AQ9BZQ8 928 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 GOLPH3Q9H4A6 298 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 ARHGEF38Q9NXL2 777 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 SERPINB4P48594 390 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 PTK7Q13308 1070 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 OR2W6PQ8NHA6 318 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 ZNF473Q8WTR7 871 aaKnown RBP16.68■□□□□ 0.26
USP42-201ENST00000306177 NSMCE4AQ9NXX6 385 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 HMBSP08397 361 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 SUPT20HL2P0C7V6 817 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 CYP2C8P10632 490 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 SHMT1P34896 483 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 TGFB2P61812 414 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 STX3Q13277 289 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 CYP4A22Q5TCH4 519 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 AP1ARQ63HQ0 302 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 TTC30AQ86WT1 665 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 SH3KBP1Q96B97 665 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 DCUN1D1Q96GG9 259 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 CCT8L2Q96SF2 557 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 ZSWIM1Q9BR11 485 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 GPRC5CQ9NQ84 441 aa16.68■□□□□ 0.26
USP42-201ENST00000306177 TLR2O60603 784 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 KCNJ1P48048 391 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 FNTAP49354 379 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 PDAP1Q13442 181 aaKnown RBP16.67■□□□□ 0.26
USP42-201ENST00000306177 USP10Q14694 798 aaKnown RBP16.67■□□□□ 0.26
USP42-201ENST00000306177 KYNUQ16719 465 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 GNASQ5JWF2 1037 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 SLC13A5Q86YT5 568 aaPredicted RBP16.67■□□□□ 0.26
USP42-201ENST00000306177 RIBC1Q8N443 379 aaPredicted RBP16.67■□□□□ 0.26
USP42-201ENST00000306177 ANKRD7Q92527 254 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 PBXIP1Q96AQ6 731 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 ASPSCR1Q9BZE9 553 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 RANBP17Q9H2T7 1088 aaKnown RBP16.67■□□□□ 0.26
USP42-201ENST00000306177 PRDM5Q9NQX1 630 aaPredicted RBP16.67■□□□□ 0.26
USP42-201ENST00000306177 IL17RBQ9NRM6 502 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 A0A087X0T9 212 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 FOXN3O00409 490 aaPredicted RBP16.67■□□□□ 0.26
USP42-201ENST00000306177 FAM228BP0C875 321 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 TMEM259Q4ZIN3 620 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 BOLA3Q53S33 107 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 ZNF484Q5JVG2 852 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 C3orf62Q6ZUJ4 267 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 ANO5Q75V66 913 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 CBWD2Q8IUF1 395 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 XPO6Q96QU8 1125 aaKnown RBP16.67■□□□□ 0.26
USP42-201ENST00000306177 DPP3Q9NY33 737 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 MTSS1O43312 755 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 PSTPIP1O43586 416 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 FAM200BP0CF97 657 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 VCAM1P19320 739 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 GARTP22102 1010 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 SEPT5Q99719 369 aaPredicted RBP16.67■□□□□ 0.26
USP42-201ENST00000306177 TFR2Q9UP52 801 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 ARHGAP23Q9P227 1491 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 MEFVO15553 781 aaPredicted RBP16.67■□□□□ 0.26
USP42-201ENST00000306177 PFDN1O60925 122 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 ZC3H11AO75152 810 aaKnown RBP eCLIP16.67■□□□□ 0.26
USP42-201ENST00000306177 CELF2O95319 508 aaKnown RBP16.67■□□□□ 0.26
USP42-201ENST00000306177 POLBP06746 335 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 SPRP35270 261 aaPredicted RBP16.67■□□□□ 0.26
USP42-201ENST00000306177 PCNX4Q63HM2 1172 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 PPIL6Q8IXY8 311 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 SLC26A7Q8TE54 656 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 MTBPQ96DY7 904 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 ZNF512Q96ME7 567 aaPredicted RBP16.67■□□□□ 0.26
USP42-201ENST00000306177 ZIM3Q96PE6 472 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 MTFR1LQ9H019 292 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 SEMA6BQ9H3T3 888 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 PCDHB8Q9UN66 801 aa16.67■□□□□ 0.26
USP42-201ENST00000306177 ALDH1A1P00352 501 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 NPTX2P47972 431 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 ALDH18A1P54886 795 aaKnown RBP16.66■□□□□ 0.26
USP42-201ENST00000306177 HIC1Q14526 733 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 DDX42Q86XP3 938 aaKnown RBP eCLIP16.66■□□□□ 0.26
USP42-201ENST00000306177 USP15Q9Y4E8 981 aaPredicted RBP16.66■□□□□ 0.26
USP42-201ENST00000306177 IL31Q6EBC2 164 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 CD302Q8IX05 232 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 RNF168Q8IYW5 571 aaPredicted RBP16.66■□□□□ 0.26
USP42-201ENST00000306177 STKLD1Q8NE28 680 aa16.66■□□□□ 0.26
USP42-201ENST00000306177 FRMD8Q9BZ67 464 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms