RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 NSL1Q96IY1 281 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 MAGEA13PA6NCF6 341 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 SSNA1O43805 119 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 ARID5BQ14865 1188 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 SLC25A41Q8N5S1 370 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 SNX8Q9Y5X2 465 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 ALDH1A1P00352 501 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 CHI3L2Q15782 390 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 CYFIP1Q7L576 1253 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 CYP4Z2PQ8N1L4 340 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 CAPSLQ8WWF8 208 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 YEATS2Q9ULM3 1422 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 ADGRA3Q8IWK6 1321 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 PRR23AA6NEV1 266 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 BMP3P12645 472 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 MS4A14Q96JA4 679 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 MNTQ99583 582 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 FAM217BQ9NTX9 383 aaPredicted RBP13.95□□□□□ -0.18
TRIM56-201ENST00000306085 PIK3CDO00329 1044 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 GGPS1O95749 300 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 GPD1LQ8N335 351 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 LCORLQ8N3X6 602 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 TRPC4APQ8TEL6 797 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 FAM210AQ96ND0 272 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 PSMB9P28065 219 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.95□□□□□ -0.18
TRIM56-201ENST00000306085 GRSF1Q12849 480 aaKnown RBP eCLIP13.95□□□□□ -0.18
TRIM56-201ENST00000306085 TSHZ1Q6ZSZ6 1077 aa13.95□□□□□ -0.18
TRIM56-201ENST00000306085 TRIM3O75382 744 aaPredicted RBP13.94□□□□□ -0.18
TRIM56-201ENST00000306085 AVPR1AP37288 418 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 PROSER1Q86XN7 944 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 UTP15Q8TED0 518 aaKnown RBP13.94□□□□□ -0.18
TRIM56-201ENST00000306085 PABPC5Q96DU9 382 aaKnown RBP13.94□□□□□ -0.18
TRIM56-201ENST00000306085 RGS18Q9NS28 235 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 AMACRQ9UHK6 382 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 HEATR9A2RTY3 570 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 CYBBP04839 570 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 ACADSP16219 412 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 XPO6Q96QU8 1125 aaKnown RBP13.94□□□□□ -0.18
TRIM56-201ENST00000306085 PNKPQ96T60 521 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 S100A13Q99584 98 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 PRRG3Q9BZD7 231 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 SLC52A2Q9HAB3 445 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 MRGBPQ9NV56 204 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 TUBGCP4Q9UGJ1 667 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 TBKBP1A7MCY6 615 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 FAM98CQ17RN3 349 aaKnown RBP13.94□□□□□ -0.18
TRIM56-201ENST00000306085 CLEC16AQ2KHT3 1053 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 EYA1Q99502 592 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 KLHL4Q9C0H6 718 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 PADI4Q9UM07 663 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 CHKBQ9Y259 395 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 OOSP2Q86WS3 158 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 USP33Q8TEY7 942 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 FAM135BQ49AJ0 1406 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 IRF1P10914 325 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 TFE3P19532 575 aaPredicted RBP13.94□□□□□ -0.18
TRIM56-201ENST00000306085 GPC1P35052 558 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 KYNUQ16719 465 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 ZRANB3Q5FWF4 1079 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 OSBPL8Q9BZF1 889 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 FOXP3Q9BZS1 431 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 WWOXQ9NZC7 414 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 WBP11Q9Y2W2 641 aaKnown RBP13.94□□□□□ -0.18
TRIM56-201ENST00000306085 PCDHB6Q9Y5E3 794 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 LOC100653049A0A140TA62 436 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 KRT34O76011 436 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 ABATP80404 500 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 DRAP1Q14919 205 aaPredicted RBP13.94□□□□□ -0.18
TRIM56-201ENST00000306085 KPNA4O00629 521 aaPredicted RBP13.94□□□□□ -0.18
TRIM56-201ENST00000306085 SLC16A4O15374 487 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 CLPTM1O96005 669 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 WARSP23381 471 aaKnown RBP13.94□□□□□ -0.18
TRIM56-201ENST00000306085 RNPC3Q96LT9 517 aaKnown RBP13.94□□□□□ -0.18
TRIM56-201ENST00000306085 PDHA2P29803 388 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 JAK3P52333 1124 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 NKX1-1Q15270 411 aaPredicted RBP13.94□□□□□ -0.18
TRIM56-201ENST00000306085 UGP2Q16851 508 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 MIGA2Q7L4E1 593 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 ZNF341Q9BYN7 854 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 COMMD9Q9P000 198 aa13.94□□□□□ -0.18
TRIM56-201ENST00000306085 ABCB11O95342 1321 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 TPD52L2O43399 206 aaKnown RBP13.93□□□□□ -0.18
TRIM56-201ENST00000306085 GAS2L3Q86XJ1 694 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 XXYLT1Q8NBI6 393 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 FAM187AA6NFU0 413 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 CHRNB3Q05901 458 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 RC3H1Q5TC82 1133 aaKnown RBP13.93□□□□□ -0.18
TRIM56-201ENST00000306085 KIRREL3Q8IZU9 778 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 CD248Q9HCU0 757 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 SF3B1O75533 1304 aaKnown RBP eCLIP13.93□□□□□ -0.181e-6■■■■■ 85
TRIM56-201ENST00000306085 LGALS16A8MUM7 142 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 ADORA1P30542 326 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 VAMP7P51809 220 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 TIGD7Q6NT04 549 aaPredicted RBP13.93□□□□□ -0.18
TRIM56-201ENST00000306085 ATG16L2Q8NAA4 619 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 MANSC1Q9H8J5 431 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 C8orf4Q9NR00 106 aa13.93□□□□□ -0.18
TRIM56-201ENST00000306085 EIF3HO15372 352 aaKnown RBP eCLIP13.93□□□□□ -0.186e-7■■■□□ 16.4
TRIM56-201ENST00000306085 KCNH2Q12809 1159 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms