RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 EXOC8Q8IYI6 725 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 EPS8L1Q8TE68 723 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 ERVK-5Q9HDB9 667 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 RNF181Q9P0P0 153 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 KLHL8Q9P2G9 620 aaPredicted RBP13.95□□□□□ -0.18
DDX54-201ENST00000306014 MTO1Q9Y2Z2 717 aaKnown RBP13.95□□□□□ -0.18
DDX54-201ENST00000306014 FRMPD4Q14CM0 1322 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 CALCAP01258 141 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 SPATA31C1P0DKV0 1188 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 MYBPC2Q14324 1141 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 FAM151AQ8WW52 585 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 CENPTQ96BT3 561 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 MTBPQ96DY7 904 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 NAF1Q96HR8 494 aaKnown RBP13.95□□□□□ -0.18
DDX54-201ENST00000306014 C15orf41Q9Y2V0 281 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 CASZ1Q86V15 1759 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 RGPD1P0DJD0 1748 aa13.95□□□□□ -0.18
DDX54-201ENST00000306014 NFIBO00712 420 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 WDR46O15213 610 aaKnown RBP13.94□□□□□ -0.18
DDX54-201ENST00000306014 MUTP22033 750 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 HMGCS2P54868 508 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 THOC5Q13769 683 aaKnown RBP13.94□□□□□ -0.18
DDX54-201ENST00000306014 PREPLQ4J6C6 727 aaPredicted RBP13.94□□□□□ -0.18
DDX54-201ENST00000306014 LRRC23Q53EV4 343 aaPredicted RBP13.94□□□□□ -0.18
DDX54-201ENST00000306014 SWT1Q5T5J6 900 aaKnown RBP13.94□□□□□ -0.18
DDX54-201ENST00000306014 MCOLN2Q8IZK6 566 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 GMCL1P1Q8NEA9 526 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 MTFR1LQ9H019 292 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 ACAD9Q9H845 621 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 PHLPP1O60346 1717 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 TGFB1I1O43294 461 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 MX2P20592 715 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 MARSP56192 900 aaKnown RBP13.94□□□□□ -0.18
DDX54-201ENST00000306014 MRPS35P82673 323 aaKnown RBP13.94□□□□□ -0.18
DDX54-201ENST00000306014 PRPSAP1Q14558 356 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 RRP1BQ14684 758 aaKnown RBP13.94□□□□□ -0.18
DDX54-201ENST00000306014 KIF22Q14807 665 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 FAXCQ5TGI0 409 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 KRT80Q6KB66 452 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 FBXO36Q8NEA4 188 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 PPP1R11O60927 126 aaPredicted RBP13.94□□□□□ -0.18
DDX54-201ENST00000306014 MAP3K6O95382 1288 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 NUDT17P0C025 328 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 RGS7P49802 495 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 AP3M2P53677 418 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 IRX1P78414 480 aaPredicted RBP13.94□□□□□ -0.18
DDX54-201ENST00000306014 STX3Q13277 289 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 SEPT6Q14141 434 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 FSCBQ5H9T9 825 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 SPDYCQ5MJ68 293 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 PFDN4Q9NQP4 134 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 USP20Q9Y2K6 914 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 TRIM49D1C9J1S8 452 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 UBTFL6P0CB48 400 aaPredicted RBP13.94□□□□□ -0.18
DDX54-201ENST00000306014 STAT5BP51692 787 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 PPATQ06203 517 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 SGSM1Q2NKQ1 1148 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 ZCWPW2Q504Y3 356 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 FOXR2Q6PJQ5 311 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 AGAP11Q8TF27 550 aa13.94□□□□□ -0.18
DDX54-201ENST00000306014 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.94□□□□□ -0.18
DDX54-201ENST00000306014 ROBO1Q9Y6N7 1651 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 PRKCBP05771 671 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 PAX7P23759 505 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 BIRC2Q13490 618 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 CUL3Q13618 768 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 PDE1CQ14123 709 aaPredicted RBP13.93□□□□□ -0.18
DDX54-201ENST00000306014 APOBEC3HQ6NTF7 200 aaKnown RBP13.93□□□□□ -0.18
DDX54-201ENST00000306014 BZW1Q7L1Q6 419 aaKnown RBP13.93□□□□□ -0.18
DDX54-201ENST00000306014 TEX9Q8N6V9 391 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 HDAC11Q96DB2 347 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 FAM167AQ96KS9 214 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 SH3GL3Q99963 347 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 INPP5FQ9Y2H2 1132 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 APOL1O14791 398 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 CYP24A1Q07973 514 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.93□□□□□ -0.18
DDX54-201ENST00000306014 CDR2LQ86X02 465 aaPredicted RBP13.93□□□□□ -0.18
DDX54-201ENST00000306014 NDUFAF2Q8N183 169 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 SIX6OS1Q8N1H7 587 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 EXD1Q8NHP7 514 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 LPAR1Q92633 364 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 PWWP2AQ96N64 755 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 PCYOX1Q9UHG3 505 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 GRIN2DO15399 1336 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 CREB3O43889 395 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 SNRPAP09012 282 aaKnown RBP13.93□□□□□ -0.18
DDX54-201ENST00000306014 VHLP40337 213 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 OTUD4Q01804 1114 aaKnown RBP13.93□□□□□ -0.18
DDX54-201ENST00000306014 EXOC3L1Q86VI1 746 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 PAFAH2Q99487 392 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 HOXC10Q9NYD6 342 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 GAKO14976 1311 aa13.93□□□□□ -0.18
DDX54-201ENST00000306014 GJB6O95452 261 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 CBX6O95503 412 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 ICAM1P05362 532 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 PECAM1P16284 738 aaPredicted RBP13.92□□□□□ -0.18
DDX54-201ENST00000306014 DRG2P55039 364 aaKnown RBP13.92□□□□□ -0.18
DDX54-201ENST00000306014 AP1B1Q10567 949 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 PKN2Q16513 984 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms