RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 ECE2O60344 883 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 FKBP6O75344 327 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 RTKN2Q8IZC4 609 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 FUKQ8N0W3 1084 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 C1orf131Q8NDD1 294 aaKnown RBP13.43□□□□□ -0.26
COL3A1-201ENST00000304636 CNBD2Q96M20 576 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 ABCA9Q8IUA7 1624 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 SALL1Q9NSC2 1324 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 RSPH10B2B2RC85 870 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 TM9SF1O15321 606 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 PRKCBP05771 671 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 RSPH10BP0C881 870 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 ZCCHC18P0CG32 403 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 KCNA2P16389 499 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 IFNA8P32881 189 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 PMS1P54277 932 aaKnown RBP13.42□□□□□ -0.26
COL3A1-201ENST00000304636 MRPS15P82914 257 aaKnown RBP13.42□□□□□ -0.26
COL3A1-201ENST00000304636 MAP3K10Q02779 954 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 BTKQ06187 659 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 C11orf63Q6NUN7 778 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 ATG4AQ8WYN0 398 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 CHCHD3Q9NX63 227 aaKnown RBP13.42□□□□□ -0.26
COL3A1-201ENST00000304636 TAGLN3Q9UI15 199 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 ERVK-9P63128 1117 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 MROH9Q5TGP6 573 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 FBXO33Q7Z6M2 555 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 LRRC6Q86X45 466 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 CLEC4FQ8N1N0 589 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 SEMA4AQ9H3S1 761 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 COG4Q9H9E3 785 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 OLA1Q9NTK5 396 aaKnown RBP13.42□□□□□ -0.26
COL3A1-201ENST00000304636 GGA2Q9UJY4 613 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 EXTL3O43909 919 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 NDUFB10O96000 172 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 KCNA1Q09470 495 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 PGM2Q96G03 612 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 EPAS1Q99814 870 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 TRIM62Q9BVG3 475 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 OSGEPQ9NPF4 335 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 GID8Q9NWU2 228 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 GTPBP10A4D1E9 387 aaKnown RBP13.42□□□□□ -0.26
COL3A1-201ENST00000304636 ATP9AO75110 1047 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 SGPL1O95470 568 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 KRT8P05787 483 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 LCP1P13796 627 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 CDH2P19022 906 aaPredicted RBP13.42□□□□□ -0.26
COL3A1-201ENST00000304636 TCN1P20061 433 aaPredicted RBP13.42□□□□□ -0.26
COL3A1-201ENST00000304636 TPI1P60174 286 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 LAMB3Q13751 1172 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 SLC10A5Q5PT55 438 aa13.42□□□□□ -0.26
COL3A1-201ENST00000304636 ZSCAN5CA6NGD5 496 aaPredicted RBP13.41□□□□□ -0.26
COL3A1-201ENST00000304636 SEC23AQ15436 765 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 AASDHQ4L235 1098 aaPredicted RBP13.41□□□□□ -0.26
COL3A1-201ENST00000304636 ACAD9Q9H845 621 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 TEKT2Q9UIF3 430 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 GFAPP14136 432 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 HSD17B4P51659 736 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 CIAPIN1Q6FI81 312 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 PLD3Q8IV08 490 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 CD302Q8IX05 232 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 FBXO36Q8NEA4 188 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 JADE3Q92613 823 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 BEGAINQ9BUH8 593 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 KLHL4Q9C0H6 718 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 CAAP1Q9H8G2 361 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 LRRC10BA6NIK2 292 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 GLRA3O75311 464 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 BRD2P25440 801 aaKnown RBP13.41□□□□□ -0.26
COL3A1-201ENST00000304636 SULT1E1P49888 294 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 ATXN3P54252 364 aaPredicted RBP13.41□□□□□ -0.26
COL3A1-201ENST00000304636 NKX1-1Q15270 411 aaPredicted RBP13.41□□□□□ -0.26
COL3A1-201ENST00000304636 TRMT5Q32P41 509 aaKnown RBP13.41□□□□□ -0.26
COL3A1-201ENST00000304636 GPAT2Q6NUI2 795 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 BRINP3Q76B58 766 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 PTPRN2Q92932 1015 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 ZKSCAN4Q969J2 545 aaPredicted RBP13.41□□□□□ -0.26
COL3A1-201ENST00000304636 KIF12Q96FN5 646 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 TNIP3Q96KP6 325 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 AGAP3Q96P47 875 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 TMEM120AQ9BXJ8 343 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 SP110Q9HB58 689 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 RHBDL2Q9NX52 303 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 AP4S1Q9Y587 144 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 PPRC1Q5VV67 1664 aaKnown RBP13.41□□□□□ -0.26
COL3A1-201ENST00000304636 SETD1BQ9UPS6 1966 aaKnown RBP13.41□□□□□ -0.26
COL3A1-201ENST00000304636 THRAP10827 490 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 NUDT2P50583 147 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 ARPP19P56211 112 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 TTC33Q6PID6 262 aaPredicted RBP13.41□□□□□ -0.26
COL3A1-201ENST00000304636 MOXD1Q6UVY6 613 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 RNF149Q8NC42 400 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 TSEN2Q8NCE0 465 aaKnown RBP13.41□□□□□ -0.26
COL3A1-201ENST00000304636 SPDYE1Q8NFV5 336 aaPredicted RBP13.41□□□□□ -0.26
COL3A1-201ENST00000304636 ASAP3Q8TDY4 903 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 RMDN2Q96LZ7 410 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 ZNF560Q96MR9 790 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 OLFML3Q9NRN5 406 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 TRPC5OSA6NMA1 111 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 APOA4P06727 396 aa13.41□□□□□ -0.26
COL3A1-201ENST00000304636 ADRA2BP18089 450 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms