RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 SMARCB1Q12824 385 aa28.47■■■□□ 2.15
CDKN2A-201ENST00000304494 KMT5BQ4FZB7 885 aa28.47■■■□□ 2.15
CDKN2A-201ENST00000304494 SLC39A12Q504Y0 691 aa28.47■■■□□ 2.15
CDKN2A-201ENST00000304494 PRSS36Q5K4E3 855 aa28.47■■■□□ 2.15
CDKN2A-201ENST00000304494 PARM1Q6UWI2 310 aa28.47■■■□□ 2.15
CDKN2A-201ENST00000304494 CXorf38Q8TB03 319 aa28.47■■■□□ 2.15
CDKN2A-201ENST00000304494 FGF14Q92915 247 aa28.47■■■□□ 2.15
CDKN2A-201ENST00000304494 ASAH2Q9NR71 780 aa28.47■■■□□ 2.15
CDKN2A-201ENST00000304494 HUS1O60921 280 aa28.46■■■□□ 2.15
CDKN2A-201ENST00000304494 PRPF40AO75400 957 aaKnown RBP28.46■■■□□ 2.15
CDKN2A-201ENST00000304494 AVPR2P30518 371 aa28.46■■■□□ 2.15
CDKN2A-201ENST00000304494 BFSP1Q12934 665 aa28.46■■■□□ 2.15
CDKN2A-201ENST00000304494 MYO1EQ12965 1108 aa28.46■■■□□ 2.15
CDKN2A-201ENST00000304494 TMEM86AQ8N2M4 240 aa28.46■■■□□ 2.15
CDKN2A-201ENST00000304494 FSIP1Q8NA03 581 aa28.46■■■□□ 2.15
CDKN2A-201ENST00000304494 RDH13Q8NBN7 331 aa28.46■■■□□ 2.15
CDKN2A-201ENST00000304494 ATAD1Q8NBU5 361 aa28.46■■■□□ 2.15
CDKN2A-201ENST00000304494 C2orf15Q8WU43 125 aaKnown RBP28.46■■■□□ 2.15
CDKN2A-201ENST00000304494 CCDC47Q96A33 483 aaKnown RBP28.46■■■□□ 2.15
CDKN2A-201ENST00000304494 FNBP1Q96RU3 617 aa28.46■■■□□ 2.15
CDKN2A-201ENST00000304494 RTP3Q9BQQ7 232 aa28.46■■■□□ 2.15
CDKN2A-201ENST00000304494 GDAP2Q9NXN4 497 aa28.46■■■□□ 2.15
CDKN2A-201ENST00000304494 SIX4Q9UIU6 781 aa28.46■■■□□ 2.15
CDKN2A-201ENST00000304494 CFHP08603 1231 aa28.45■■■□□ 2.14
CDKN2A-201ENST00000304494 VCPP55072 806 aaKnown RBP28.45■■■□□ 2.14
CDKN2A-201ENST00000304494 STK4Q13043 487 aa28.45■■■□□ 2.14
CDKN2A-201ENST00000304494 PSMD6Q15008 389 aa28.45■■■□□ 2.14
CDKN2A-201ENST00000304494 LMBRD2Q68DH5 695 aaPredicted RBP28.45■■■□□ 2.14
CDKN2A-201ENST00000304494 DCP1BQ8IZD4 617 aaKnown RBP28.45■■■□□ 2.14
CDKN2A-201ENST00000304494 MCRS1Q96EZ8 462 aa28.45■■■□□ 2.14
CDKN2A-201ENST00000304494 CRISPLD1Q9H336 500 aa28.45■■■□□ 2.14
CDKN2A-201ENST00000304494 SLC2A4RGQ9NR83 387 aa28.45■■■□□ 2.14
CDKN2A-201ENST00000304494 SLC27A5Q9Y2P5 690 aa28.45■■■□□ 2.14
CDKN2A-201ENST00000304494 ASB3Q9Y575 518 aa28.45■■■□□ 2.14
CDKN2A-201ENST00000304494 DOCK6Q96HP0 2047 aa28.45■■■□□ 2.14
CDKN2A-201ENST00000304494 NOTCH4Q99466 2003 aa28.45■■■□□ 2.14
CDKN2A-201ENST00000304494 PTPRJQ12913 1337 aa28.44■■■□□ 2.14
CDKN2A-201ENST00000304494 RPN1P04843 607 aaKnown RBP28.44■■■□□ 2.14
CDKN2A-201ENST00000304494 CEBPBP17676 345 aa28.44■■■□□ 2.14
CDKN2A-201ENST00000304494 TUFMP49411 452 aaKnown RBP28.44■■■□□ 2.14
CDKN2A-201ENST00000304494 NUBP1P53384 320 aa28.44■■■□□ 2.14
CDKN2A-201ENST00000304494 EPHA5P54756 1037 aa28.44■■■□□ 2.14
CDKN2A-201ENST00000304494 CYP24A1Q07973 514 aa28.44■■■□□ 2.14
CDKN2A-201ENST00000304494 SIX5Q8N196 739 aa28.44■■■□□ 2.14
CDKN2A-201ENST00000304494 PDCL2Q8N4E4 241 aa28.44■■■□□ 2.14
CDKN2A-201ENST00000304494 KIAA0895Q8NCT3 520 aa28.44■■■□□ 2.14
CDKN2A-201ENST00000304494 OR5B17Q8NGF7 314 aa28.44■■■□□ 2.14
CDKN2A-201ENST00000304494 SPATA18Q8TC71 538 aa28.44■■■□□ 2.14
CDKN2A-201ENST00000304494 CCDC34Q96HJ3 373 aa28.44■■■□□ 2.14
CDKN2A-201ENST00000304494 GDPD2Q9HCC8 539 aa28.44■■■□□ 2.14
CDKN2A-201ENST00000304494 TCHHQ07283 1943 aa28.43■■■□□ 2.14
CDKN2A-201ENST00000304494 DLATP10515 647 aaKnown RBP28.43■■■□□ 2.14
CDKN2A-201ENST00000304494 TNNI1P19237 187 aa28.43■■■□□ 2.14
CDKN2A-201ENST00000304494 CLCN5P51795 746 aa28.43■■■□□ 2.14
CDKN2A-201ENST00000304494 TSPY1Q01534 308 aa28.43■■■□□ 2.14
CDKN2A-201ENST00000304494 ASTLQ6HA08 431 aaPredicted RBP28.43■■■□□ 2.14
CDKN2A-201ENST00000304494 HS6ST3Q8IZP7 471 aa28.43■■■□□ 2.14
CDKN2A-201ENST00000304494 TOP6BLQ8N6T0 577 aa28.43■■■□□ 2.14
CDKN2A-201ENST00000304494 ST13P5Q8NFI4 369 aaPredicted RBP28.43■■■□□ 2.14
CDKN2A-201ENST00000304494 SPPL2BQ8TCT7 592 aa28.43■■■□□ 2.14
CDKN2A-201ENST00000304494 FAM84AQ96KN4 292 aa28.43■■■□□ 2.14
CDKN2A-201ENST00000304494 CGRRF1Q99675 332 aa28.43■■■□□ 2.14
CDKN2A-201ENST00000304494 L1RE1Q9UN81 338 aa28.43■■■□□ 2.14
CDKN2A-201ENST00000304494 SNX9Q9Y5X1 595 aa28.43■■■□□ 2.14
CDKN2A-201ENST00000304494 EXOC3O60645 756 aa28.42■■■□□ 2.14
CDKN2A-201ENST00000304494 ECI2O75521 394 aa28.42■■■□□ 2.14
CDKN2A-201ENST00000304494 KIF20AO95235 890 aa28.42■■■□□ 2.14
CDKN2A-201ENST00000304494 MYL4P12829 197 aa28.42■■■□□ 2.14
CDKN2A-201ENST00000304494 CCR2P41597 374 aa28.42■■■□□ 2.14
CDKN2A-201ENST00000304494 IER5LQ5T953 404 aa28.42■■■□□ 2.14
CDKN2A-201ENST00000304494 KRBA2Q6ZNG9 492 aa28.42■■■□□ 2.14
CDKN2A-201ENST00000304494 ITIH5Q86UX2 942 aa28.42■■■□□ 2.14
CDKN2A-201ENST00000304494 FLCNQ8NFG4 579 aa28.42■■■□□ 2.14
CDKN2A-201ENST00000304494 GPR152Q8TDT2 470 aa28.42■■■□□ 2.14
CDKN2A-201ENST00000304494 TCEAL4Q96EI5 215 aa28.42■■■□□ 2.14
CDKN2A-201ENST00000304494 HPDLQ96IR7 371 aa28.42■■■□□ 2.14
CDKN2A-201ENST00000304494 ACBD6Q9BR61 282 aa28.42■■■□□ 2.14
CDKN2A-201ENST00000304494 RPP25Q9BUL9 199 aaKnown RBP28.42■■■□□ 2.14
CDKN2A-201ENST00000304494 ZNF318Q5VUA4 2279 aa28.42■■■□□ 2.14
CDKN2A-201ENST00000304494 WDFY4Q6ZS81 3184 aa28.42■■■□□ 2.14
CDKN2A-201ENST00000304494 KMT2EQ8IZD2 1858 aa28.41■■■□□ 2.14
CDKN2A-201ENST00000304494 MYL7Q01449 175 aa28.41■■■□□ 2.14
CDKN2A-201ENST00000304494 MGAT5BQ3V5L5 792 aa28.41■■■□□ 2.14
CDKN2A-201ENST00000304494 DPH6Q7L8W6 267 aa28.41■■■□□ 2.14
CDKN2A-201ENST00000304494 TRAPPC11Q7Z392 1133 aa28.41■■■□□ 2.14
CDKN2A-201ENST00000304494 TTC9BQ8N6N2 239 aa28.41■■■□□ 2.14
CDKN2A-201ENST00000304494 TMEM174Q8WUU8 243 aa28.41■■■□□ 2.14
CDKN2A-201ENST00000304494 CCDC127Q96BQ5 260 aa28.41■■■□□ 2.14
CDKN2A-201ENST00000304494 SEPT5Q99719 369 aaPredicted RBP28.41■■■□□ 2.14
CDKN2A-201ENST00000304494 KXD1Q9BQD3 176 aa28.41■■■□□ 2.14
CDKN2A-201ENST00000304494 DNAJC25Q9H1X3 360 aa28.41■■■□□ 2.14
CDKN2A-201ENST00000304494 GOLPH3LQ9H4A5 285 aa28.41■■■□□ 2.14
CDKN2A-201ENST00000304494 DDX43Q9NXZ2 648 aaKnown RBP28.41■■■□□ 2.14
CDKN2A-201ENST00000304494 ZNF202O95125 648 aa28.4■■■□□ 2.14
CDKN2A-201ENST00000304494 FGF19O95750 216 aa28.4■■■□□ 2.14
CDKN2A-201ENST00000304494 LHX1P48742 406 aa28.4■■■□□ 2.14
CDKN2A-201ENST00000304494 VEPH1Q14D04 833 aa28.4■■■□□ 2.14
CDKN2A-201ENST00000304494 SCARA3Q6AZY7 606 aa28.4■■■□□ 2.14
CDKN2A-201ENST00000304494 LRRTM3Q86VH5 581 aa28.4■■■□□ 2.14
CDKN2A-201ENST00000304494 ADGRF2Q8IZF7 708 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms