RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 ARHGAP44Q17R89 818 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 SPOUT1Q5T280 376 aaKnown RBP10.15□□□□□ -0.78
RFX3-201ENST00000302303 FAM171A1Q5VUB5 890 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 DSTYKQ6XUX3 929 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 TMC6Q7Z403 805 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 IRF2BP2Q7Z5L9 587 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 TC2NQ8N9U0 490 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 NEK11Q8NG66 645 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 LNX1Q8TBB1 728 aaPredicted RBP10.15□□□□□ -0.78
RFX3-201ENST00000302303 TMEM209Q96SK2 561 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 MMS19Q96T76 1030 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 PLVAPQ9BX97 442 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 EDEM3Q9BZQ6 932 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 ELOVL4Q9GZR5 314 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 DPEP3Q9H4B8 488 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 ALG13Q9NP73 1137 aaKnown RBP10.15□□□□□ -0.78
RFX3-201ENST00000302303 STXBP5LQ9Y2K9 1186 aa10.15□□□□□ -0.78
RFX3-201ENST00000302303 NLRC5Q86WI3 1866 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 SOX1O00570 391 aaPredicted RBP10.14□□□□□ -0.79
RFX3-201ENST00000302303 SYN3O14994 580 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 ADAM12O43184 909 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 LPXNO60711 386 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 ATP2C2O75185 946 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 SOD2P04179 222 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 RB1P06400 928 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 TBXAS1P24557 533 aaPredicted RBP10.14□□□□□ -0.79
RFX3-201ENST00000302303 CTNNB1P35222 781 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 NDST1P52848 882 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 TNNC1P63316 161 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 DSG1Q02413 1049 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 ORC1Q13415 861 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 RAB30Q15771 203 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 VARS2Q5ST30 1063 aaKnown RBP10.14□□□□□ -0.79
RFX3-201ENST00000302303 WDR59Q6PJI9 974 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 ENOSF1Q7L5Y1 443 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.14□□□□□ -0.79
RFX3-201ENST00000302303 LRRTM3Q86VH5 581 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 ADGRF2Q8IZF7 708 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 CRYBG2Q8N1P7 616 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 SLC4A11Q8NBS3 891 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 APPL2Q8NEU8 664 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 OR10T2Q8NGX3 314 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 CPLX3Q8WVH0 158 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 TGS1Q96RS0 853 aaKnown RBP10.14□□□□□ -0.79
RFX3-201ENST00000302303 SYT11Q9BT88 431 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 NUP58Q9BVL2 599 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 IMPG2Q9BZV3 1241 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 ZBP1Q9H171 429 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 CERS4Q9HA82 394 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 BARX2Q9UMQ3 279 aaPredicted RBP10.14□□□□□ -0.79
RFX3-201ENST00000302303 PCDHB12Q9Y5F1 795 aa10.14□□□□□ -0.79
RFX3-201ENST00000302303 SF3B1O75533 1304 aaKnown RBP eCLIP10.14□□□□□ -0.793e-9■■■■■ 93.6
RFX3-201ENST00000302303 LRRC53A6NM62 1247 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 H3BNC9 293 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 FSCN2O14926 492 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 TRAPPC3O43617 180 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 HUS1O60921 280 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 VNN2O95498 520 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 TPM3P06753 285 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 CD58P19256 250 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 TRIM21P19474 475 aaKnown RBP10.13□□□□□ -0.79
RFX3-201ENST00000302303 RFX1P22670 979 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 HNRNPH3P31942 346 aaKnown RBP10.13□□□□□ -0.79
RFX3-201ENST00000302303 IRS1P35568 1242 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 PPM1AP35813 382 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 MFAP3P55082 362 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 ADKP55263 362 aaKnown RBP10.13□□□□□ -0.79
RFX3-201ENST00000302303 PRPF38BQ5VTL8 546 aaKnown RBP10.13□□□□□ -0.79
RFX3-201ENST00000302303 HGSNATQ68CP4 663 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 SMYD5Q6GMV2 418 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 FAM171BQ6P995 826 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 PDXDC1Q6P996 788 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 PRSS55Q6UWB4 352 aaPredicted RBP10.13□□□□□ -0.79
RFX3-201ENST00000302303 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.13□□□□□ -0.79
RFX3-201ENST00000302303 PAQR9Q6ZVX9 377 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 GPIHBP1Q8IV16 184 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 VPS52Q8N1B4 723 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 TMEM86AQ8N2M4 240 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 SPATA18Q8TC71 538 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 AUTS2Q8WXX7 1259 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 PIK3R5Q8WYR1 880 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 TFAP2BQ92481 460 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 DDX1Q92499 740 aaKnown RBP10.13□□□□□ -0.79
RFX3-201ENST00000302303 TMEM169Q96HH4 297 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 PCMTD1Q96MG8 357 aaPredicted RBP10.13□□□□□ -0.79
RFX3-201ENST00000302303 DNAJC7Q99615 494 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 HERC2P3Q9BVR0 1158 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 FAM124BQ9H5Z6 455 aaPredicted RBP10.13□□□□□ -0.79
RFX3-201ENST00000302303 CRTAC1Q9NQ79 661 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 AAASQ9NRG9 546 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 TMLHEQ9NVH6 421 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 AIPL1Q9NZN9 384 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 MTUS1Q9ULD2 1270 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 LZTS1Q9Y250 596 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 DAAM1Q9Y4D1 1078 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 PCDHGC5Q9Y5F6 944 aa10.13□□□□□ -0.79
RFX3-201ENST00000302303 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.13□□□□□ -0.79
RFX3-201ENST00000302303 MYBPHLA2RUH7 354 aa10.12□□□□□ -0.79
RFX3-201ENST00000302303 CARNS1A5YM72 827 aa10.12□□□□□ -0.79
RFX3-201ENST00000302303 RFXAPO00287 272 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms