RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 C3orf70A6NLC5 250 aaPredicted RBP20.23■□□□□ 0.83
TSR1-201ENST00000301364 F8W8V4 182 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 BRD2P25440 801 aaKnown RBP20.23■□□□□ 0.83
TSR1-201ENST00000301364 SPRP35270 261 aaPredicted RBP20.23■□□□□ 0.83
TSR1-201ENST00000301364 CTCFP49711 727 aaPredicted RBP20.23■□□□□ 0.83
TSR1-201ENST00000301364 SYCP2LQ5T4T6 812 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 FASTKD5Q7L8L6 764 aaKnown RBP20.23■□□□□ 0.83
TSR1-201ENST00000301364 SCN4BQ8IWT1 228 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 CHST13Q8NET6 341 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 MTMR9Q96QG7 549 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 TMX2Q9Y320 296 aa20.23■□□□□ 0.83
TSR1-201ENST00000301364 SULT1E1P49888 294 aa20.22■□□□□ 0.83
TSR1-201ENST00000301364 SMTNL2Q2TAL5 461 aa20.22■□□□□ 0.83
TSR1-201ENST00000301364 ACER1Q8TDN7 264 aa20.22■□□□□ 0.83
TSR1-201ENST00000301364 ABTB1Q969K4 478 aaPredicted RBP20.22■□□□□ 0.83
TSR1-201ENST00000301364 FAM163AQ96GL9 167 aaPredicted RBP20.22■□□□□ 0.83
TSR1-201ENST00000301364 TMEM39BQ9GZU3 492 aa20.22■□□□□ 0.83
TSR1-201ENST00000301364 ITGA4P13612 1032 aa20.22■□□□□ 0.83
TSR1-201ENST00000301364 MRPS35P82673 323 aaKnown RBP20.22■□□□□ 0.83
TSR1-201ENST00000301364 TMC3Q7Z5M5 1100 aa20.22■□□□□ 0.83
TSR1-201ENST00000301364 C4orf19Q8IY42 314 aa20.22■□□□□ 0.83
TSR1-201ENST00000301364 FAM71DQ8N9W8 422 aa20.22■□□□□ 0.83
TSR1-201ENST00000301364 GPRC5CQ9NQ84 441 aa20.22■□□□□ 0.83
TSR1-201ENST00000301364 MARCOQ9UEW3 520 aaPredicted RBP20.22■□□□□ 0.83
TSR1-201ENST00000301364 OR6P1Q8NGX9 317 aa20.22■□□□□ 0.83
TSR1-201ENST00000301364 KRT82Q9NSB4 513 aa20.22■□□□□ 0.83
TSR1-201ENST00000301364 MST1RQ04912 1400 aa20.22■□□□□ 0.83
TSR1-201ENST00000301364 ZSCAN5CA6NGD5 496 aaPredicted RBP20.22■□□□□ 0.83
TSR1-201ENST00000301364 EIF4E1BA6NMX2 242 aaKnown RBP20.22■□□□□ 0.83
TSR1-201ENST00000301364 ACADSBP45954 432 aa20.22■□□□□ 0.83
TSR1-201ENST00000301364 TFDP3Q5H9I0 405 aa20.22■□□□□ 0.83
TSR1-201ENST00000301364 POTEAQ6S8J7 498 aa20.22■□□□□ 0.83
TSR1-201ENST00000301364 NDUFAF2Q8N183 169 aa20.22■□□□□ 0.83
TSR1-201ENST00000301364 SLC20A1Q8WUM9 679 aa20.22■□□□□ 0.83
TSR1-201ENST00000301364 XAB2Q9HCS7 855 aaKnown RBP20.22■□□□□ 0.83
TSR1-201ENST00000301364 TFRCP02786 760 aaKnown RBP20.21■□□□□ 0.83
TSR1-201ENST00000301364 GHRP10912 638 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 RRM1P23921 792 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 EEF1DP29692 281 aaKnown RBP20.21■□□□□ 0.83
TSR1-201ENST00000301364 NUDT12Q9BQG2 462 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 VPS33BQ9H267 617 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 CAP2P40123 477 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 SPDYCQ5MJ68 293 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 LRRC6Q86X45 466 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 SPATA20Q8TB22 786 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 ATXN7L3BQ96GX2 97 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 THTPAQ9BU02 230 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 PLEKHA5Q9HAU0 1116 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 KLRC4O43908 158 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 PDK1Q15118 436 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 TBCCQ15814 346 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 TNFRSF8P28908 595 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 TMED1Q13445 227 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 TMTC4Q5T4D3 741 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 TMCO4Q5TGY1 634 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 FRA10AC1Q70Z53 315 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 NT5DC3Q86UY8 548 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 LCA5Q86VQ0 697 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 MICALL2Q8IY33 904 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 APPL2Q8NEU8 664 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 CEP70Q8NHQ1 597 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 CXorf38Q8TB03 319 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 TAS1R2Q8TE23 839 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 ATG4CQ96DT6 458 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 SIK2Q9H0K1 926 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 SEMA4AQ9H3S1 761 aa20.21■□□□□ 0.83
TSR1-201ENST00000301364 METTL5Q9NRN9 209 aaKnown RBP20.21■□□□□ 0.83
TSR1-201ENST00000301364 POLBP06746 335 aa20.2■□□□□ 0.82
TSR1-201ENST00000301364 SHMT1P34896 483 aa20.2■□□□□ 0.82
TSR1-201ENST00000301364 TSTA3Q13630 321 aaPredicted RBP20.2■□□□□ 0.82
TSR1-201ENST00000301364 DAB2IPQ5VWQ8 1189 aa20.2■□□□□ 0.82
TSR1-201ENST00000301364 DDX3XO00571 662 aaKnown RBP eCLIP20.2■□□□□ 0.828e-8■■■□□ 14.8
TSR1-201ENST00000301364 ING2Q9H160 280 aa20.2■□□□□ 0.82
TSR1-201ENST00000301364 CD248Q9HCU0 757 aa20.2■□□□□ 0.82
TSR1-201ENST00000301364 OGTO15294 1046 aa20.2■□□□□ 0.82
TSR1-201ENST00000301364 FAM153BP0C7A2 387 aa20.2■□□□□ 0.82
TSR1-201ENST00000301364 NAMPTP43490 491 aa20.2■□□□□ 0.82
TSR1-201ENST00000301364 ZNF844Q08AG5 666 aa20.2■□□□□ 0.82
TSR1-201ENST00000301364 FAM153CQ494X1 144 aa20.2■□□□□ 0.82
TSR1-201ENST00000301364 PRPF31Q8WWY3 499 aaKnown RBP20.2■□□□□ 0.82
TSR1-201ENST00000301364 NSMCE4AQ9NXX6 385 aa20.2■□□□□ 0.82
TSR1-201ENST00000301364 FAM153AQ9UHL3 310 aa20.2■□□□□ 0.82
TSR1-201ENST00000301364 SLC24A2Q9UI40 661 aa20.2■□□□□ 0.82
TSR1-201ENST00000301364 TRIM49D1C9J1S8 452 aa20.2■□□□□ 0.82
TSR1-201ENST00000301364 HBP1O60381 514 aa20.2■□□□□ 0.82
TSR1-201ENST00000301364 AGBL3Q8NEM8 1001 aa20.2■□□□□ 0.82
TSR1-201ENST00000301364 AGR3Q8TD06 166 aa20.2■□□□□ 0.82
TSR1-201ENST00000301364 COL9A3Q14050 684 aaPredicted RBP20.19■□□□□ 0.82
TSR1-201ENST00000301364 CLEC16AQ2KHT3 1053 aa20.19■□□□□ 0.82
TSR1-201ENST00000301364 MDH1BQ5I0G3 518 aa20.19■□□□□ 0.82
TSR1-201ENST00000301364 SLC47A2Q86VL8 602 aa20.19■□□□□ 0.82
TSR1-201ENST00000301364 PPHLN1Q8NEY8 458 aaKnown RBP20.19■□□□□ 0.82
TSR1-201ENST00000301364 SP110Q9HB58 689 aa20.19■□□□□ 0.82
TSR1-201ENST00000301364 PRKCIP41743 596 aa20.19■□□□□ 0.82
TSR1-201ENST00000301364 CYP24A1Q07973 514 aa20.19■□□□□ 0.82
TSR1-201ENST00000301364 SMAD1Q15797 465 aaKnown RBP20.19■□□□□ 0.82
TSR1-201ENST00000301364 CYP4A22Q5TCH4 519 aa20.19■□□□□ 0.82
TSR1-201ENST00000301364 C3orf67Q6ZVT6 689 aa20.19■□□□□ 0.82
TSR1-201ENST00000301364 AGAP3Q96P47 875 aa20.19■□□□□ 0.82
TSR1-201ENST00000301364 DDX20Q9UHI6 824 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms