RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ALDH18A1P54886 795 aaKnown RBP15.45■□□□□ 0.06
COL6A2-201ENST00000300527 PDCD2Q16342 344 aaPredicted RBP15.45■□□□□ 0.06
COL6A2-201ENST00000300527 C6orf163Q5TEZ5 329 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 MFSD7Q6UXD7 560 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 PAFAH2Q99487 392 aa15.45■□□□□ 0.06
COL6A2-201ENST00000300527 DDX60LQ5H9U9 1706 aaKnown RBP15.44■□□□□ 0.06
COL6A2-201ENST00000300527 DDTLA6NHG4 134 aaPredicted RBP15.44■□□□□ 0.06
COL6A2-201ENST00000300527 IPO5O00410 1097 aaKnown RBP15.44■□□□□ 0.06
COL6A2-201ENST00000300527 DNALI1O14645 258 aaPredicted RBP15.44■□□□□ 0.06
COL6A2-201ENST00000300527 MTA2O94776 668 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 STK10O94804 968 aaKnown RBP15.44■□□□□ 0.06
COL6A2-201ENST00000300527 ARL4CP56559 192 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 HIF1AQ16665 826 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 MEX3CQ5U5Q3 659 aaKnown RBP15.44■□□□□ 0.06
COL6A2-201ENST00000300527 PLA2G4FQ68DD2 849 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 MTHFD1LQ6UB35 978 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 CERS5Q8N5B7 392 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 TEKT3Q9BXF9 490 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 TMEM206Q9H813 350 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 ZNF395Q9H8N7 513 aaPredicted RBP15.44■□□□□ 0.06
COL6A2-201ENST00000300527 ZNF219Q9P2Y4 722 aaPredicted RBP15.44■□□□□ 0.06
COL6A2-201ENST00000300527 ANKRD33BA6NCL7 494 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 PRPF4O43172 522 aaKnown RBP eCLIP15.44■□□□□ 0.06
COL6A2-201ENST00000300527 GH2P01242 217 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 CENPCQ03188 943 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 NFX1Q12986 1120 aaKnown RBP15.44■□□□□ 0.06
COL6A2-201ENST00000300527 RASA2Q15283 850 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 SMAD1Q15797 465 aaKnown RBP15.44■□□□□ 0.06
COL6A2-201ENST00000300527 LIN9Q5TKA1 542 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 RIBC1Q8N443 379 aaPredicted RBP15.44■□□□□ 0.06
COL6A2-201ENST00000300527 FBXL13Q8NEE6 735 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 FNBP1Q96RU3 617 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.44■□□□□ 0.06
COL6A2-201ENST00000300527 CHMP2BQ9UQN3 213 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 STK24Q9Y6E0 443 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 IGLV3-22A0A075B6J6 115 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 PSMD10O75832 226 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 LYNP07948 512 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 EPHB1P54762 984 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 NRLP54845 237 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 ALCAMQ13740 583 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 SLCO2A1Q92959 643 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 MECRQ9BV79 373 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 KRT82Q9NSB4 513 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 C1orf112Q9NSG2 853 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 NDE1Q9NXR1 346 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 CCNL1Q9UK58 526 aaPredicted RBP15.44■□□□□ 0.06
COL6A2-201ENST00000300527 AGTPBP1Q9UPW5 1226 aa15.44■□□□□ 0.06
COL6A2-201ENST00000300527 MAGEB2O15479 319 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 TNNI1P19237 187 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 GEMIN4P57678 1058 aaKnown RBP15.43■□□□□ 0.06
COL6A2-201ENST00000300527 RTP1P59025 263 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 YWHAGP61981 247 aaKnown RBP eCLIP15.43■□□□□ 0.06
COL6A2-201ENST00000300527 BASP1P80723 227 aaKnown RBP15.43■□□□□ 0.06
COL6A2-201ENST00000300527 SMTNL2Q2TAL5 461 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 ZNF394Q53GI3 561 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 HELQQ8TDG4 1101 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 DCAF4Q8WV16 495 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 CRYGNQ8WXF5 182 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 NMD3Q96D46 503 aaKnown RBP15.43■□□□□ 0.06
COL6A2-201ENST00000300527 FAM213AQ9BRX8 229 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 SAR1AQ9NR31 198 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 NAV1Q8NEY1 1877 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 GAKO14976 1311 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 PROSCO94903 275 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 POLR2MP0CAP2 368 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 HARSP12081 509 aaKnown RBP15.43■□□□□ 0.06
COL6A2-201ENST00000300527 MUTP22033 750 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 CCNFP41002 786 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 AP1B1Q10567 949 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 WDR72Q3MJ13 1102 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 CEP55Q53EZ4 464 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 SV2AQ7L0J3 742 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 NLRX1Q86UT6 975 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 EFCAB3Q8N7B9 438 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 TTC25Q96NG3 672 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 NDNQ99608 321 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 SLC13A1Q9BZW2 595 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 PRR12Q9ULL5 1215 aa15.43■□□□□ 0.06
COL6A2-201ENST00000300527 CTC1Q2NKJ3 1217 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 ANKRD22Q5VYY1 191 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 DCUN1D2Q6PH85 259 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 TMEM270Q6UE05 265 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 ARID3BQ8IVW6 561 aaPredicted RBP15.42■□□□□ 0.06
COL6A2-201ENST00000300527 CCDC110Q8TBZ0 833 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 ZC3H12CQ9C0D7 883 aaKnown RBP15.42■□□□□ 0.06
COL6A2-201ENST00000300527 HOMER2Q9NSB8 354 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 ANGPTL2Q9UKU9 493 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 SLC26A4O43511 780 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 TYROBPO43914 113 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 GLRA2P23416 452 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 RPL7AP62424 266 aaKnown RBP15.42■□□□□ 0.06
COL6A2-201ENST00000300527 DEUP1Q05D60 604 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 SLC15A2Q16348 729 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 ABCB5Q2M3G0 1257 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 CNPY1Q3B7I2 92 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 RGS9BPQ6ZS82 235 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 FBXO36Q8NEA4 188 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 ZWILCHQ9H900 591 aa15.42■□□□□ 0.06
COL6A2-201ENST00000300527 EURLQ9NYK6 297 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms