RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ZCCHC23Q6ZST2 131 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 ARHGAP27Q6ZUM4 889 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 NDUFAF2Q8N183 169 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 CDKL2Q92772 493 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 DCLK3Q9C098 648 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 LRRC4CQ9HCJ2 640 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 PACSIN3Q9UKS6 424 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 BGNP21810 368 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 RPA3P35244 121 aaPredicted RBP13.98□□□□□ -0.17
CASC4-201ENST00000299957 AP1B1Q10567 949 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 CCHCR1Q8TD31 782 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 FAM151AQ8WW52 585 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 PIK3R5Q8WYR1 880 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 ROPN1BQ9BZX4 212 aaPredicted RBP13.98□□□□□ -0.17
CASC4-201ENST00000299957 ROPN1Q9HAT0 212 aaPredicted RBP13.98□□□□□ -0.17
CASC4-201ENST00000299957 SNX9Q9Y5X1 595 aa13.98□□□□□ -0.17
CASC4-201ENST00000299957 GTPBP10A4D1E9 387 aaKnown RBP13.97□□□□□ -0.17
CASC4-201ENST00000299957 SPECC1L-ADORA2AF8WAN1 911 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 TAS2R40P59535 323 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 CYP24A1Q07973 514 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 LRRC6Q86X45 466 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 MREGQ8N565 214 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 CDHR1Q96JP9 859 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 MYLK2Q9H1R3 596 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 ANLNQ9NQW6 1124 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 TMX2Q9Y320 296 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 PCDHA3Q9Y5H8 950 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 GAKO14976 1311 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 GZMAP12544 262 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 SLC20A2Q08357 652 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 FASTKD3Q14CZ7 662 aaKnown RBP13.97□□□□□ -0.17
CASC4-201ENST00000299957 GMCL1Q96IK5 515 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 TTC25Q96NG3 672 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 A0A1W2PPM1 405 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 DDX3YO15523 660 aaKnown RBP13.97□□□□□ -0.17
CASC4-201ENST00000299957 ENTPD3O75355 529 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 SDC4P31431 198 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 CAP2P40123 477 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 SLC1A1P43005 524 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 NRLP54845 237 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 GABPAQ06546 454 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 BIRC2Q13490 618 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 SEPT6Q14141 434 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 MMEL1Q495T6 779 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 MSL3Q8N5Y2 521 aaKnown RBP13.97□□□□□ -0.17
CASC4-201ENST00000299957 ZNF606Q8WXB4 792 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 OTUD5Q96G74 571 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 PDCD2LQ9BRP1 358 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 MTFR1LQ9H019 292 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 KLC2Q9H0B6 622 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 KDM4CQ9H3R0 1056 aa13.97□□□□□ -0.17
CASC4-201ENST00000299957 PROSCO94903 275 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 LDHAP00338 332 aaKnown RBP13.96□□□□□ -0.17
CASC4-201ENST00000299957 PRKCBP05771 671 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 PYGBP11216 843 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 ARL4AP40617 200 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 CASP2P42575 452 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 ABCG1P45844 678 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 CLCN3P51790 818 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 HIRAP54198 1017 aaPredicted RBP13.96□□□□□ -0.17
CASC4-201ENST00000299957 FOXD4Q12950 439 aaPredicted RBP13.96□□□□□ -0.17
CASC4-201ENST00000299957 CLEC16AQ2KHT3 1053 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 SPRED3Q2MJR0 410 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 DCAF12L1Q5VU92 463 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 SUGP1Q8IWZ8 645 aaKnown RBP13.96□□□□□ -0.17
CASC4-201ENST00000299957 RCOR2Q8IZ40 523 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 POU5F2Q8N7G0 328 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 TCP10LQ8TDR4 215 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 MORC4Q8TE76 937 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 DNAJC9Q8WXX5 260 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 DDX27Q96GQ7 796 aaKnown RBP13.96□□□□□ -0.17
CASC4-201ENST00000299957 RMDN2Q96LZ7 410 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 MANSC1Q9H8J5 431 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 VAV3Q9UKW4 847 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.96□□□□□ -0.17
CASC4-201ENST00000299957 RGPD1P0DJD0 1748 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 RBAK-RBAKDNI3L0D1 243 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 LCA5LO95447 670 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 KRT7P08729 469 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 CCND1P24385 295 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 TYK2P29597 1187 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 HOXD13P35453 343 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 XKR3Q5GH77 459 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 WDR75Q8IWA0 830 aaKnown RBP13.96□□□□□ -0.17
CASC4-201ENST00000299957 PGM2Q96G03 612 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 PAFAH2Q99487 392 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 P2RX7Q99572 595 aaKnown RBP13.96□□□□□ -0.17
CASC4-201ENST00000299957 CYP26B1Q9NR63 512 aa13.96□□□□□ -0.17
CASC4-201ENST00000299957 FER1L4A9Z1Z3 1794 aa13.96□□□□□ -0.18
CASC4-201ENST00000299957 MED7O43513 233 aa13.96□□□□□ -0.18
CASC4-201ENST00000299957 HSPA4LO95757 839 aa13.96□□□□□ -0.18
CASC4-201ENST00000299957 CYP3A4P08684 503 aa13.96□□□□□ -0.18
CASC4-201ENST00000299957 MYL2P10916 166 aa13.96□□□□□ -0.18
CASC4-201ENST00000299957 VCAM1P19320 739 aa13.96□□□□□ -0.18
CASC4-201ENST00000299957 TBXAS1P24557 533 aaPredicted RBP13.96□□□□□ -0.18
CASC4-201ENST00000299957 BTKQ06187 659 aa13.96□□□□□ -0.18
CASC4-201ENST00000299957 SLC12A1Q13621 1099 aa13.96□□□□□ -0.18
CASC4-201ENST00000299957 CHI3L2Q15782 390 aa13.96□□□□□ -0.18
CASC4-201ENST00000299957 KLHL38Q2WGJ6 581 aa13.96□□□□□ -0.18
CASC4-201ENST00000299957 CD302Q8IX05 232 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms