RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 PTPN7P35236 360 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 KCNJ6P48051 423 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 MRPL28Q13084 256 aaKnown RBP14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 XKR3Q5GH77 459 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 RIN3Q8TB24 985 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 HASPINQ8TF76 798 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 OTUB1Q96FW1 271 aaPredicted RBP14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 DDX50Q9BQ39 737 aaKnown RBP14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ATP11BQ9Y2G3 1177 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 CYTH3O43739 400 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PPP1R37O75864 691 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TARSP26639 723 aaKnown RBP14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ARMC2Q8NEN0 867 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 CPB2Q96IY4 423 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TAAR1Q96RJ0 339 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SMARCAD1Q9H4L7 1026 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 GGA3Q9NZ52 723 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 LSM7Q9UK45 103 aaKnown RBP14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 KBTBD13C9JR72 458 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ORC2Q13416 577 aaPredicted RBP14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TMCO5AQ8N6Q1 288 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 FOPNLQ96NB1 174 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 GPR63Q9BZJ6 419 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 BRD8Q9H0E9 1235 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 CACNA2D2Q9NY47 1150 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 C6orf203Q9P0P8 240 aaPredicted RBP14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 FAM32AQ9Y421 112 aaKnown RBP14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 USP15Q9Y4E8 981 aaPredicted RBP14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ENO4A6NNW6 628 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 WBP4O75554 376 aaKnown RBP14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 DGAT1O75907 488 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 RHOBTB1O94844 696 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 GH1P01241 217 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 KCNA3P22001 575 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SLC16A1P53985 500 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PIGHQ14442 188 aaPredicted RBP14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PDIA5Q14554 519 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PAN2Q504Q3 1202 aaKnown RBP14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 RANBP17Q9H2T7 1088 aaKnown RBP14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 USE1Q9NZ43 259 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 RASSF10A6NK89 507 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PMPCBO75439 489 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ATG4AQ8WYN0 398 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 HES6Q96HZ4 224 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 THAP2Q9H0W7 228 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 EXOSC4Q9NPD3 245 aaKnown RBP14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 KLRK1P26718 216 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 GRAMD1AQ96CP6 724 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 OLFM3Q96PB7 478 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 OSBPL8Q9BZF1 889 aa14.17□□□□□ -0.14
CHRFAM7A-201ENST00000299847 B2RBV5 119 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 DAB1O75553 588 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SGPL1O95470 568 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 NR3C2P08235 984 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SAMD7Q7Z3H4 446 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 THAP11Q96EK4 314 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 GPRC5CQ9NQ84 441 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 GPATCH2LQ9NWQ4 482 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 FAM47DPA6NHR8 397 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 RSPH10B2B2RC85 870 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SKAP2O75563 359 aaPredicted RBP14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 GYPCP04921 128 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 RSPH10BP0C881 870 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ITIH2P19823 946 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 YY1P25490 414 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 RCAN1P53805 252 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ANTXR2P58335 489 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 R3HDM1Q15032 1099 aaKnown RBP14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 NAB2Q15742 525 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 KCNT1Q5JUK3 1230 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 RASGRP2Q7LDG7 609 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 NT5C1AQ9BXI3 368 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ZNF556Q9HAH1 456 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SLC37A4O43826 429 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SERPINB5P36952 375 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 MFSD4BQ5TF39 518 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PLEKHM3Q6ZWE6 761 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 KCNB2Q92953 911 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 XPO6Q96QU8 1125 aaKnown RBP14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 JMJD4Q9H9V9 463 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TPST1O60507 370 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 KYAT1Q16773 422 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 IYDQ6PHW0 289 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 CCNI2Q6ZMN8 369 aaPredicted RBP14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TC2NQ8N9U0 490 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 KIF2CQ99661 725 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 RUSC1Q9BVN2 902 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 MOV10L1Q9BXT6 1211 aaKnown RBP14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 MANSC1Q9H8J5 431 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PRG3Q9Y2Y8 225 aaPredicted RBP14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 EIF3HO15372 352 aaKnown RBP eCLIP14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 MLH1P40692 756 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 BARGINQ6ZT62 677 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ZNF669Q96BR6 464 aaPredicted RBP14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 KCTD10Q9H3F6 313 aa14.16□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ARHGEF40Q8TER5 1519 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 RHOBTB3O94955 611 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 GALNTL6Q49A17 601 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms