RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 ACAD9Q9H845 621 aa17.24■□□□□ 0.35
SNAPC4-201ENST00000298532 ZNF446Q9NWS9 450 aa17.24■□□□□ 0.35
SNAPC4-201ENST00000298532 ZNF70Q9UC06 446 aaPredicted RBP17.24■□□□□ 0.35
SNAPC4-201ENST00000298532 RSPH10B2B2RC85 870 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 RSPH10BP0C881 870 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 SKOR1P84550 965 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 OVGP1Q12889 678 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 FOXR1Q6PIV2 292 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 TMEM106CQ9BVX2 250 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 WHRNQ9P202 907 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 SWSAP1Q6NVH7 229 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 SPDYE1Q8NFV5 336 aaPredicted RBP17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 OR6P1Q8NGX9 317 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 IFT43Q96FT9 208 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 RMDN2Q96LZ7 410 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 FAM118BQ9BPY3 351 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 GTPBP10A4D1E9 387 aaKnown RBP17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 ATMINO43313 823 aaPredicted RBP17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 CETPP11597 493 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 CIITAP33076 1130 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 MEI1Q5TIA1 1274 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 SNRNP48Q6IEG0 339 aaKnown RBP17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 CATSPER4Q7RTX7 472 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 PLD3Q8IV08 490 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 THAP2Q9H0W7 228 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 C15orf41Q9Y2V0 281 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 DAGLAQ9Y4D2 1042 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 HUS1O60921 280 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 AKR1B1P15121 316 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 CALB2P22676 271 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 PTPN4P29074 926 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 HADHAP40939 763 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 FOXD4Q12950 439 aaPredicted RBP17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 TAF1CQ15572 869 aaPredicted RBP17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 SNRNP35Q16560 246 aaKnown RBP17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 KCTD17Q8N5Z5 321 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 COG4Q9H9E3 785 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 AIPL1Q9NZN9 384 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 CDYLQ9Y232 598 aa17.23■□□□□ 0.35
SNAPC4-201ENST00000298532 RALAP11233 206 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 TTLL4Q14679 1199 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 SYCP2LQ5T4T6 812 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 WLSQ5T9L3 541 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 LMBRD2Q68DH5 695 aaPredicted RBP17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 CLEC4FQ8N1N0 589 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 DDHD1Q8NEL9 900 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 ZNF507Q8TCN5 953 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 AENQ8WTP8 325 aaKnown RBP17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 CLMNQ96JQ2 1002 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 MCEEQ96PE7 176 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 CAAP1Q9H8G2 361 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 ADARB2Q9NS39 739 aaKnown RBP17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 OLA1Q9NTK5 396 aaKnown RBP17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 PPP2R3BQ9Y5P8 575 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 F8VZ95 297 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 STRNO43815 780 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 CDH2P19022 906 aaPredicted RBP17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 S100A5P33763 92 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 SPRP35270 261 aaPredicted RBP17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 PMS1P54277 932 aaKnown RBP17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 ZNF543Q08ER8 600 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 TBX2Q13207 712 aaPredicted RBP17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 ZNF677Q86XU0 584 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 SCUBE1Q8IWY4 988 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 ANKRD13AQ8IZ07 590 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 MYOZ2Q9NPC6 264 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 ZNF302Q9NR11 478 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 ATP11BQ9Y2G3 1177 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 M0R3G1 203 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 KRT75O95678 551 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 MYL2P10916 166 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 KCNA2P16389 499 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 RBBP8NLQ8NC74 664 aaPredicted RBP17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 MMP19Q99542 508 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 PRPF18Q99633 342 aaKnown RBP17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 RNF146Q9NTX7 359 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 FAM217BQ9NTX9 383 aaPredicted RBP17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 ARHGAP20Q9P2F6 1191 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 TNPO2O14787 897 aaKnown RBP17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 TBC1D4O60343 1298 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 BEST2Q8NFU1 509 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 GGA3Q9NZ52 723 aa17.22■□□□□ 0.35
SNAPC4-201ENST00000298532 HNRNPCL2B2RXH8 293 aa17.21■□□□□ 0.35
SNAPC4-201ENST00000298532 RBP3P10745 1247 aa17.21■□□□□ 0.35
SNAPC4-201ENST00000298532 YWHABP31946 246 aaKnown RBP17.21■□□□□ 0.35
SNAPC4-201ENST00000298532 KCNA1Q09470 495 aa17.21■□□□□ 0.35
SNAPC4-201ENST00000298532 WASHC2DQ5SRD0 308 aa17.21■□□□□ 0.35
SNAPC4-201ENST00000298532 C9orf131Q5VYM1 1079 aa17.21■□□□□ 0.35
SNAPC4-201ENST00000298532 FBXO33Q7Z6M2 555 aa17.21■□□□□ 0.35
SNAPC4-201ENST00000298532 FAM111AQ96PZ2 611 aa17.21■□□□□ 0.35
SNAPC4-201ENST00000298532 TRIM49D1C9J1S8 452 aa17.21■□□□□ 0.35
SNAPC4-201ENST00000298532 SERPINB1P30740 379 aa17.21■□□□□ 0.35
SNAPC4-201ENST00000298532 ACBD5Q5T8D3 534 aaPredicted RBP17.21■□□□□ 0.35
SNAPC4-201ENST00000298532 CDC42EP4Q9H3Q1 356 aaKnown RBP17.21■□□□□ 0.35
SNAPC4-201ENST00000298532 RUBCNLQ9H714 662 aa17.21■□□□□ 0.35
SNAPC4-201ENST00000298532 PCDHA10Q9Y5I2 948 aa17.21■□□□□ 0.35
SNAPC4-201ENST00000298532 MEGF6O75095 1541 aa17.21■□□□□ 0.35
SNAPC4-201ENST00000298532 ATXN3P54252 364 aaPredicted RBP17.21■□□□□ 0.35
SNAPC4-201ENST00000298532 ANGEL2Q5VTE6 544 aaKnown RBP17.21■□□□□ 0.35
SNAPC4-201ENST00000298532 RSAD1Q9HA92 442 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms