RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 ZKSCAN4Q969J2 545 aaPredicted RBP10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 MAGEB18Q96M61 343 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 TRIM7Q9C029 511 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 HAPLN2Q9GZV7 340 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 LHX5Q9H2C1 402 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 PCDH9Q9HC56 1237 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 SSU72Q9NP77 194 aaKnown RBP10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 SMG5Q9UPR3 1016 aaKnown RBP10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 R3HDM2Q9Y2K5 976 aaKnown RBP10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 GJA3Q9Y6H8 435 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 PTPRFP10586 1907 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 FAM189A1O60320 539 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 IL18RAPO95256 599 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 KRT1P04264 644 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 KRT7P08729 469 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 UBA1P22314 1058 aaKnown RBP10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 SLC8A1P32418 973 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 MAGEA4P43358 317 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 GTF2A1P52655 376 aaPredicted RBP10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 VCPP55072 806 aaKnown RBP10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 SP2Q02086 613 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 SP4Q02446 784 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 TFDP1Q14186 410 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 ACAP1Q15027 740 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 SNCBQ16143 134 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 KYNUQ16719 465 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 TFDP3Q5H9I0 405 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 PPP1R15BQ5SWA1 713 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 SPOPLQ6IQ16 392 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 LBX2Q6XYB7 198 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 SPOCD1Q6ZMY3 1216 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 RBM15Q96T37 977 aaKnown RBP eCLIP10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 HAUS2Q9NVX0 235 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 EURLQ9NYK6 297 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 SLC24A2Q9UI40 661 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 TPX2Q9ULW0 747 aaKnown RBP10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 ARL2BPQ9Y2Y0 163 aa10.58□□□□□ -0.72
TNFRSF11B-201ENST00000297350 GSTTP1A0A1W2PQM5 241 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 DNM1LO00429 736 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 B4GALT4O60513 344 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 MSCO60682 206 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 TNNC2P02585 160 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 BRAFP15056 766 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 MNAT1P51948 309 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 IL9RQ01113 521 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 CCDC15Q0P6D6 951 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 TRPC3Q13507 836 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 RIPK1Q13546 671 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 ACVR2BQ13705 512 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 MAPK6Q16659 721 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 KYAT1Q16773 422 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 CCDC142Q17RM4 750 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 LMBRD2Q68DH5 695 aaPredicted RBP10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 CYB5D1Q6P9G0 228 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 DCUN1D2Q6PH85 259 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 RGS9BPQ6ZS82 235 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 PLPPR4Q7Z2D5 763 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 FUKQ8N0W3 1084 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 TTC39CQ8N584 583 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 OR5B17Q8NGF7 314 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 HERPUD2Q9BSE4 406 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 SPON1Q9HCB6 807 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 CPSF3Q9UKF6 684 aaKnown RBP10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 IGKV6-21A0A0C4DH24 114 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 PRPF4O43172 522 aaKnown RBP eCLIP10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 LGR5O75473 907 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 GJB6O95452 261 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 SKIV2L2P42285 1042 aaKnown RBP10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 WNT7BP56706 349 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 HADHQ16836 314 aaKnown RBP10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 P3H1Q32P28 736 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 ZC3H12AQ5D1E8 599 aaKnown RBP10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 TSHZ1Q6ZSZ6 1077 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 CENPUQ71F23 418 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 PARP9Q8IXQ6 854 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 ACO2Q99798 780 aaKnown RBP10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 HEMGNQ9BXL5 484 aa10.57□□□□□ -0.72
TNFRSF11B-201ENST00000297350 hCG_1818297A0A087WSY0 165 aa10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 FAM47DPA6NHR8 397 aa10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 PRKCBP05771 671 aa10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 CD58P19256 250 aa10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 PROZP22891 400 aa10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 STX2P32856 288 aa10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 SSR1P43307 286 aaKnown RBP10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 OASLQ15646 514 aaKnown RBP10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 WDR78Q5VTH9 848 aa10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 MPZL3Q6UWV2 235 aa10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 SPATA21Q7Z572 469 aa10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 CCDC91Q7Z6B0 441 aa10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 ERICH1Q86X53 443 aa10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 PASD1Q8IV76 773 aa10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 THNSL1Q8IYQ7 743 aa10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 UHMK1Q8TAS1 419 aaKnown RBP10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 TRPM4Q8TD43 1214 aa10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 ANKRD36BP1Q96IX9 119 aa10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 ZBTB45Q96K62 511 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 ELAC2Q9BQ52 826 aaKnown RBP10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 NFKBIZQ9BYH8 718 aa10.56□□□□□ -0.72
TNFRSF11B-201ENST00000297350 MIS12Q9H081 205 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms