RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 ZMYND8Q9ULU4 1186 aaPredicted RBP20.23■□□□□ 0.83
TRA2A-201ENST00000297071 SKAP2O75563 359 aaPredicted RBP20.22■□□□□ 0.83
TRA2A-201ENST00000297071 FAM155BO75949 473 aa20.22■□□□□ 0.83
TRA2A-201ENST00000297071 NEFHP12036 1026 aa20.22■□□□□ 0.83
TRA2A-201ENST00000297071 EPHB2P29323 1055 aa20.22■□□□□ 0.83
TRA2A-201ENST00000297071 PCK1P35558 622 aa20.22■□□□□ 0.83
TRA2A-201ENST00000297071 PSMD6Q15008 389 aa20.22■□□□□ 0.83
TRA2A-201ENST00000297071 ZACNQ401N2 412 aa20.22■□□□□ 0.83
TRA2A-201ENST00000297071 TAF1BQ53T94 588 aaPredicted RBP20.22■□□□□ 0.83
TRA2A-201ENST00000297071 CC2D2BQ6DHV5 1058 aa20.22■□□□□ 0.83
TRA2A-201ENST00000297071 SLC39A4Q6P5W5 647 aa20.22■□□□□ 0.83
TRA2A-201ENST00000297071 LVRNQ6Q4G3 990 aa20.22■□□□□ 0.83
TRA2A-201ENST00000297071 PAXIP1Q6ZW49 1069 aaPredicted RBP20.22■□□□□ 0.83
TRA2A-201ENST00000297071 CHSY1Q86X52 802 aa20.22■□□□□ 0.83
TRA2A-201ENST00000297071 CPA5Q8WXQ8 436 aa20.22■□□□□ 0.83
TRA2A-201ENST00000297071 FAM136AQ96C01 138 aa20.22■□□□□ 0.83
TRA2A-201ENST00000297071 BTBD10Q9BSF8 475 aa20.22■□□□□ 0.83
TRA2A-201ENST00000297071 VCXQ9H320 206 aa20.22■□□□□ 0.83
TRA2A-201ENST00000297071 POLIQ9UNA4 740 aa20.22■□□□□ 0.83
TRA2A-201ENST00000297071 LRCH1Q9Y2L9 728 aa20.22■□□□□ 0.83
TRA2A-201ENST00000297071 ASB3Q9Y575 518 aa20.22■□□□□ 0.83
TRA2A-201ENST00000297071 E7ESA3 106 aa20.21■□□□□ 0.83
TRA2A-201ENST00000297071 POC1B-GALNT4F8VUJ3 575 aa20.21■□□□□ 0.83
TRA2A-201ENST00000297071 ICAM1P05362 532 aa20.21■□□□□ 0.83
TRA2A-201ENST00000297071 ACO1P21399 889 aaKnown RBP20.21■□□□□ 0.83
TRA2A-201ENST00000297071 ARSEP51690 589 aa20.21■□□□□ 0.83
TRA2A-201ENST00000297071 KRT76Q01546 638 aa20.21■□□□□ 0.83
TRA2A-201ENST00000297071 TAP1Q03518 808 aa20.21■□□□□ 0.83
TRA2A-201ENST00000297071 ZFAND2BQ8WV99 257 aa20.21■□□□□ 0.83
TRA2A-201ENST00000297071 KMT5AQ9NQR1 393 aa20.21■□□□□ 0.83
TRA2A-201ENST00000297071 MTO1Q9Y2Z2 717 aaKnown RBP20.21■□□□□ 0.83
TRA2A-201ENST00000297071 FARP1Q9Y4F1 1045 aaPredicted RBP20.21■□□□□ 0.83
TRA2A-201ENST00000297071 DENND3A2RUS2 1198 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 SIGLEC16A6NMB1 481 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 DDX39AO00148 427 aaKnown RBP20.2■□□□□ 0.82
TRA2A-201ENST00000297071 GSTA2P09210 222 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 RBM5P52756 815 aaKnown RBP eCLIP20.2■□□□□ 0.82
TRA2A-201ENST00000297071 LLGL1Q15334 1064 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 ATP11CQ8NB49 1132 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 MZB1Q8WU39 189 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 POMGNT1Q8WZA1 660 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 SPOCK2Q92563 424 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 PTCD3Q96EY7 689 aaKnown RBP20.2■□□□□ 0.82
TRA2A-201ENST00000297071 KIF9Q9HAQ2 790 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.2■□□□□ 0.827e-12■■■■■ 107.6
TRA2A-201ENST00000297071 TOPORSQ9NS56 1045 aaPredicted RBP20.2■□□□□ 0.82
TRA2A-201ENST00000297071 RABGEF1Q9UJ41 708 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 USP21Q9UK80 565 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 DNPEPQ9ULA0 475 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 ZNF148Q9UQR1 794 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 PCDHAC2Q9Y5I4 1007 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.2■□□□□ 0.82
TRA2A-201ENST00000297071 WDR64B1ANS9 1081 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 TLR3O15455 904 aaKnown RBP20.2■□□□□ 0.82
TRA2A-201ENST00000297071 DKC1O60832 514 aaKnown RBP eCLIP20.2■□□□□ 0.82
TRA2A-201ENST00000297071 TBXAS1P24557 533 aaPredicted RBP20.2■□□□□ 0.82
TRA2A-201ENST00000297071 PTGER2P43116 358 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 CTCFP49711 727 aaPredicted RBP20.2■□□□□ 0.82
TRA2A-201ENST00000297071 FAM102BQ5T8I3 360 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 PRUNE1Q86TP1 453 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 MFN1Q8IWA4 741 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.2■□□□□ 0.829e-8■□□□□ 9.9
TRA2A-201ENST00000297071 NSL1Q96IY1 281 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 CSRNP1Q96S65 589 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 MAK16Q9BXY0 300 aaKnown RBP20.2■□□□□ 0.82
TRA2A-201ENST00000297071 TRIM55Q9BYV6 548 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 ACSS3Q9H6R3 686 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 VPS37BQ9H9H4 285 aa20.2■□□□□ 0.82
TRA2A-201ENST00000297071 DPPA5A6NC42 116 aa20.19■□□□□ 0.82
TRA2A-201ENST00000297071 A8MXQ7 604 aa20.19■□□□□ 0.82
TRA2A-201ENST00000297071 NVLO15381 856 aaKnown RBP20.19■□□□□ 0.82
TRA2A-201ENST00000297071 EXTL3O43909 919 aa20.19■□□□□ 0.82
TRA2A-201ENST00000297071 C4BPAP04003 597 aaKnown RBP20.19■□□□□ 0.82
TRA2A-201ENST00000297071 DSG3P32926 999 aa20.19■□□□□ 0.82
TRA2A-201ENST00000297071 CDK18Q07002 472 aa20.19■□□□□ 0.82
TRA2A-201ENST00000297071 GPS1Q13098 491 aa20.19■□□□□ 0.82
TRA2A-201ENST00000297071 SPP2Q13103 211 aa20.19■□□□□ 0.82
TRA2A-201ENST00000297071 NBPF20Q3BBV1 942 aa20.19■□□□□ 0.82
TRA2A-201ENST00000297071 XKR9Q5GH70 373 aa20.19■□□□□ 0.82
TRA2A-201ENST00000297071 SPOCD1Q6ZMY3 1216 aa20.19■□□□□ 0.82
TRA2A-201ENST00000297071 NIPA2Q8N8Q9 360 aa20.19■□□□□ 0.82
TRA2A-201ENST00000297071 ACER1Q8TDN7 264 aa20.19■□□□□ 0.82
TRA2A-201ENST00000297071 FAM167BQ9BTA0 163 aa20.19■□□□□ 0.82
TRA2A-201ENST00000297071 FHDC1Q9C0D6 1143 aaPredicted RBP20.19■□□□□ 0.82
TRA2A-201ENST00000297071 ZBTB21Q9ULJ3 1066 aa20.19■□□□□ 0.82
TRA2A-201ENST00000297071 SNCAIPQ9Y6H5 919 aa20.19■□□□□ 0.82
TRA2A-201ENST00000297071 STYXL1Q9Y6J8 313 aa20.19■□□□□ 0.82
TRA2A-201ENST00000297071 TMEM191CA6NGB0 347 aa20.18■□□□□ 0.82
TRA2A-201ENST00000297071 HAUS5O94927 633 aa20.18■□□□□ 0.82
TRA2A-201ENST00000297071 CBX6O95503 412 aa20.18■□□□□ 0.82
TRA2A-201ENST00000297071 ATP5BP06576 529 aaKnown RBP20.18■□□□□ 0.82
TRA2A-201ENST00000297071 TMEM191BP0C7N4 346 aa20.18■□□□□ 0.82
TRA2A-201ENST00000297071 DHRS4L1P0CG22 281 aa20.18■□□□□ 0.82
TRA2A-201ENST00000297071 C4orf33Q8N1A6 199 aa20.18■□□□□ 0.82
TRA2A-201ENST00000297071 ARHGAP24Q8N264 748 aa20.18■□□□□ 0.82
TRA2A-201ENST00000297071 BANPQ8N9N5 519 aa20.18■□□□□ 0.82
TRA2A-201ENST00000297071 SLC35B2Q8TB61 432 aa20.18■□□□□ 0.82
TRA2A-201ENST00000297071 CCDC28BQ9BUN5 200 aa20.18■□□□□ 0.82
TRA2A-201ENST00000297071 CADM1Q9BY67 442 aaKnown RBP20.18■□□□□ 0.82
TRA2A-201ENST00000297071 KANSL3Q9P2N6 904 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms