RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 CCDC134Q9H6E4 229 aa13.26□□□□□ -0.29
TMEM200A-201ENST00000296978 TBC1D22BQ9NU19 505 aa13.26□□□□□ -0.29
TMEM200A-201ENST00000296978 PARVAQ9NVD7 372 aa13.26□□□□□ -0.29
TMEM200A-201ENST00000296978 C2orf71A6NGG8 1288 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 F8VP50 259 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 CST8O60676 142 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 CHRNA5P30532 468 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 PTDSS1P48651 473 aaKnown RBP13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 RPS6P62753 249 aaKnown RBP13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 RBBP5Q15291 538 aaKnown RBP13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 CYP1B1Q16678 543 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 CFAP157Q5JU67 520 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 STRIP1Q5VSL9 837 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 RNF43Q68DV7 783 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 TRABD2AQ86V40 505 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 ATP11CQ8NB49 1132 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 KCTD6Q8NC69 237 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 FEZF2Q8TBJ5 459 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 ATP6V0A1Q93050 837 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 SYT11Q9BT88 431 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 IP6K2Q9UHH9 426 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 ATP9AO75110 1047 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 CFHP08603 1231 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 UBTFL6P0CB48 400 aaPredicted RBP13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 ADRA2BP18089 450 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 DARS2Q6PI48 645 aaKnown RBP13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 ARHGAP24Q8N264 748 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 ZNF526Q8TF50 670 aaPredicted RBP13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 PSPC1Q8WXF1 523 aaKnown RBP13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 TRIM4Q9C037 500 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 PHLPP1O60346 1717 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 WEE2P0C1S8 567 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 GTF2H1P32780 548 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 PGM1P36871 562 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 MGAT5Q09328 741 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 DGKZQ13574 1117 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 HADHQ16836 314 aaKnown RBP13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 DEFB132Q7Z7B7 95 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 ZBTB45Q96K62 511 aaPredicted RBP13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 SMYD3Q9H7B4 428 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 MANSC1Q9H8J5 431 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 FBXO6Q9NRD1 293 aaPredicted RBP13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 SLC9A2Q9UBY0 812 aa13.25□□□□□ -0.29
TMEM200A-201ENST00000296978 SHANK3Q9BYB0 1731 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 KIAA1551Q9HCM1 1747 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 MAP3K7O43318 606 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 HADHBP55084 474 aaKnown RBP13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 ORC1Q13415 861 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 THOC5Q13769 683 aaKnown RBP13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 MYBPC2Q14324 1141 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 SIX1Q15475 284 aaPredicted RBP13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 OTOAQ7RTW8 1153 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 CCDC110Q8TBZ0 833 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 TEKT4Q8WW24 435 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 CD101Q93033 1021 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 MASTLQ96GX5 879 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 PAFAH2Q99487 392 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 TARS2Q9BW92 718 aaKnown RBP13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 CYP39A1Q9NYL5 469 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 MROH7Q68CQ1 1323 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 H3BRJ5 948 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 DNALI1O14645 258 aaPredicted RBP13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 CCDC22O60826 627 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 SERPINB3P29508 390 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 ADSSP30520 456 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 ENOSF1Q7L5Y1 443 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 RCOR2Q8IZ40 523 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 NLGN1Q8N2Q7 840 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 FAM71DQ8N9W8 422 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 FBXO36Q8NEA4 188 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 CRYGNQ8WXF5 182 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 SENP1Q9P0U3 644 aa13.24□□□□□ -0.29
TMEM200A-201ENST00000296978 LAMB1P07942 1786 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 COPEO14579 308 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 OPHN1O60890 802 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 ZCCHC18P0CG32 403 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 TCF4P15884 667 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 RFC5P40937 340 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 GCLCP48506 637 aaPredicted RBP13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 GEMIN4P57678 1058 aaKnown RBP13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 FAXCQ5TGI0 409 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 TLDC1Q6P9B6 456 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 SLC30A9Q6PML9 568 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 ZCCHC9Q8N567 271 aaKnown RBP13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 KCTD17Q8N5Z5 321 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 DDX27Q96GQ7 796 aaKnown RBP13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 SLC5A4Q9NY91 659 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 FEM1BQ9UK73 627 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 TMX2Q9Y320 296 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 PCDHA10Q9Y5I2 948 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 HEY1Q9Y5J3 304 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 B2RBV5 119 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 POLRMTO00411 1230 aaKnown RBP13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 MCF2LO15068 1137 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 RNF8O76064 485 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 GNAT1P11488 350 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 BGNP21810 368 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 PTPN4P29074 926 aa13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 HOXA10P31260 410 aaPredicted RBP13.23□□□□□ -0.29
TMEM200A-201ENST00000296978 DSG3P32926 999 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms