RNA–Protein interactions for RNA: ENST00000296550.11

DCLK2-201, Transcript of doublecortin like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK2, Length 4,265 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK2-201ENST00000296550 DCLK3Q9C098 648 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 DHX35Q9H5Z1 703 aaKnown RBP17.16■□□□□ 0.34
DCLK2-201ENST00000296550 ZFP69BQ9UJL9 534 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 MYH3P11055 1940 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 TRAPPC3O43617 180 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 LPXNO60711 386 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 KRT38O76015 456 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 GJB6O95452 261 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 HSD17B4P51659 736 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 NFIL3Q16649 462 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 SIAH1Q8IUQ4 282 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 RASGEF1CQ8N431 466 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 SPATA18Q8TC71 538 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 DEPDC1BQ8WUY9 529 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 PGM2Q96G03 612 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 RAB6BQ9NRW1 208 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 CISHQ9NSE2 258 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 H0Y3Z8 333 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 PPFIA2O75334 1257 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 PSMD6Q15008 389 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 KREMEN1Q96MU8 473 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 PCDHB18PQ96TA0 734 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 ERVK-5Q9HDB9 667 aa17.16■□□□□ 0.34
DCLK2-201ENST00000296550 PSMC3IPQ9P2W1 217 aaPredicted RBP17.16■□□□□ 0.34
DCLK2-201ENST00000296550 TJP1Q07157 1748 aa17.15■□□□□ 0.34
DCLK2-201ENST00000296550 F5H423 210 aaPredicted RBP17.15■□□□□ 0.34
DCLK2-201ENST00000296550 ATP5HO75947 161 aa17.15■□□□□ 0.34
DCLK2-201ENST00000296550 GARSP41250 739 aaKnown RBP17.15■□□□□ 0.34
DCLK2-201ENST00000296550 PPATQ06203 517 aa17.15■□□□□ 0.34
DCLK2-201ENST00000296550 DNAJC3Q13217 504 aa17.15■□□□□ 0.34
DCLK2-201ENST00000296550 ANO5Q75V66 913 aa17.15■□□□□ 0.34
DCLK2-201ENST00000296550 SIX6OS1Q8N1H7 587 aa17.15■□□□□ 0.34
DCLK2-201ENST00000296550 ACAP3Q96P50 834 aa17.15■□□□□ 0.34
DCLK2-201ENST00000296550 AVENQ9NQS1 362 aaPredicted RBP17.15■□□□□ 0.34
DCLK2-201ENST00000296550 CHMP2BQ9UQN3 213 aa17.15■□□□□ 0.34
DCLK2-201ENST00000296550 SNX9Q9Y5X1 595 aa17.15■□□□□ 0.34
DCLK2-201ENST00000296550 DOT1LQ8TEK3 1739 aa17.15■□□□□ 0.34
DCLK2-201ENST00000296550 ZNF572Q7Z3I7 529 aaPredicted RBP17.15■□□□□ 0.34
DCLK2-201ENST00000296550 RSPH3Q86UC2 560 aa17.15■□□□□ 0.34
DCLK2-201ENST00000296550 UBA3Q8TBC4 463 aa17.15■□□□□ 0.34
DCLK2-201ENST00000296550 SEMA4DQ92854 862 aa17.15■□□□□ 0.34
DCLK2-201ENST00000296550 SLC12A2P55011 1212 aa17.15■□□□□ 0.34
DCLK2-201ENST00000296550 MRPS9P82933 396 aaKnown RBP17.15■□□□□ 0.34
DCLK2-201ENST00000296550 CNTN2Q02246 1040 aa17.15■□□□□ 0.34
DCLK2-201ENST00000296550 KIF2BQ8N4N8 673 aa17.15■□□□□ 0.34
DCLK2-201ENST00000296550 SLC13A1Q9BZW2 595 aa17.15■□□□□ 0.34
DCLK2-201ENST00000296550 METTL5Q9NRN9 209 aaKnown RBP17.15■□□□□ 0.34
DCLK2-201ENST00000296550 COL20A1Q9P218 1284 aa17.15■□□□□ 0.34
DCLK2-201ENST00000296550 XPO7Q9UIA9 1087 aaKnown RBP17.15■□□□□ 0.34
DCLK2-201ENST00000296550 ADAMTS7Q9UKP4 1686 aa17.14■□□□□ 0.34
DCLK2-201ENST00000296550 A8MXQ7 604 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 PLA2G6O60733 806 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 ANKRD13AQ8IZ07 590 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 NEUROG2Q9H2A3 272 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 DMAC2Q9NW81 257 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 PCYOX1Q9UHG3 505 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 NR2E1Q9Y466 385 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 KLRG2A4D1S0 409 aaPredicted RBP17.14■□□□□ 0.33
DCLK2-201ENST00000296550 KCNN4O15554 427 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 APRTP07741 180 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 SCTRP47872 440 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 CLCN3P51790 818 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 JAG1P78504 1218 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 C1QBPQ07021 282 aaKnown RBP17.14■□□□□ 0.33
DCLK2-201ENST00000296550 C12orf56Q8IXR9 622 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 BEST2Q8NFU1 509 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 PPARGC1AQ9UBK2 798 aaKnown RBP17.14■□□□□ 0.33
DCLK2-201ENST00000296550 COG5Q9UP83 839 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 DDX3YO15523 660 aaKnown RBP17.14■□□□□ 0.33
DCLK2-201ENST00000296550 CYP1A2P05177 515 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 DRG2P55039 364 aaKnown RBP17.14■□□□□ 0.33
DCLK2-201ENST00000296550 RBP5P82980 135 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 TMEM132DQ14C87 1099 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 TAF11Q15544 211 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 ATG16L1Q676U5 607 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 TTC39CQ8N584 583 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 SMC1BQ8NDV3 1235 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 TMEM121Q9BTD3 319 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 TUBB6Q9BUF5 446 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 NACA2Q9H009 215 aa17.14■□□□□ 0.33
DCLK2-201ENST00000296550 WRAP73Q9P2S5 460 aaPredicted RBP17.14■□□□□ 0.33
DCLK2-201ENST00000296550 ITGB3P05106 788 aa17.13■□□□□ 0.33
DCLK2-201ENST00000296550 MYL3P08590 195 aa17.13■□□□□ 0.33
DCLK2-201ENST00000296550 ADORA2BP29275 332 aa17.13■□□□□ 0.33
DCLK2-201ENST00000296550 PTGER2P43116 358 aa17.13■□□□□ 0.33
DCLK2-201ENST00000296550 ARFIP2P53365 341 aa17.13■□□□□ 0.33
DCLK2-201ENST00000296550 TFDP3Q5H9I0 405 aa17.13■□□□□ 0.33
DCLK2-201ENST00000296550 RIBC1Q8N443 379 aaPredicted RBP17.13■□□□□ 0.33
DCLK2-201ENST00000296550 FAM71DQ8N9W8 422 aa17.13■□□□□ 0.33
DCLK2-201ENST00000296550 ERP27Q96DN0 273 aa17.13■□□□□ 0.33
DCLK2-201ENST00000296550 HAUS5O94927 633 aa17.13■□□□□ 0.33
DCLK2-201ENST00000296550 LYPLA2O95372 231 aa17.13■□□□□ 0.33
DCLK2-201ENST00000296550 CCNE2O96020 404 aa17.13■□□□□ 0.33
DCLK2-201ENST00000296550 PGK2P07205 417 aa17.13■□□□□ 0.33
DCLK2-201ENST00000296550 RRP1BQ14684 758 aaKnown RBP17.13■□□□□ 0.33
DCLK2-201ENST00000296550 GEN1Q17RS7 908 aa17.13■□□□□ 0.33
DCLK2-201ENST00000296550 MAP7D1Q3KQU3 841 aa17.13■□□□□ 0.33
DCLK2-201ENST00000296550 CYB5D1Q6P9G0 228 aa17.13■□□□□ 0.33
DCLK2-201ENST00000296550 ARMCX2Q7L311 632 aa17.13■□□□□ 0.33
DCLK2-201ENST00000296550 GYG2O15488 501 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms