RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 SYCP2LQ5T4T6 812 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 CENPPQ6IPU0 288 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 IZUMO2Q6UXV1 221 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 FUKQ8N0W3 1084 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 EIF1ADQ8N9N8 165 aaKnown RBP11.52□□□□□ -0.57
PBRM1-201ENST00000296302 CNDP1Q96KN2 507 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 GGA2Q9UJY4 613 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 UBA6A0AVT1 1052 aaPredicted RBP11.52□□□□□ -0.57
PBRM1-201ENST00000296302 GLRA3O75311 464 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 RAP1GDS1P52306 607 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 ZC2HC1CQ53FD0 456 aaPredicted RBP11.52□□□□□ -0.57
PBRM1-201ENST00000296302 SPDYCQ5MJ68 293 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 NT5DC1Q5TFE4 455 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 MTDHQ86UE4 582 aaKnown RBP11.52□□□□□ -0.57
PBRM1-201ENST00000296302 SP110Q9HB58 689 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 ABCF3Q9NUQ8 709 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 HOXC10Q9NYD6 342 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 HERC5Q9UII4 1024 aaKnown RBP11.52□□□□□ -0.57
PBRM1-201ENST00000296302 SPHKAPQ2M3C7 1700 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 TM9SF1O15321 606 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 ALBP02768 609 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 GZMAP12544 262 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 ADORA2BP29275 332 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 TPI1P60174 286 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 TROAPQ12815 778 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 DMC1Q14565 340 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 PATL1Q86TB9 770 aaKnown RBP11.52□□□□□ -0.57
PBRM1-201ENST00000296302 ATP8B4Q8TF62 1192 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 PTPRN2Q92932 1015 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 TRIM54Q9BYV2 358 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 SARS2Q9NP81 518 aaKnown RBP11.52□□□□□ -0.57
PBRM1-201ENST00000296302 COL15A1P39059 1388 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 A0A0G2JLW4 131 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 CLK1P49759 484 aaKnown RBP11.51□□□□□ -0.57
PBRM1-201ENST00000296302 RUNX1T1Q06455 604 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 SNRNP48Q6IEG0 339 aaKnown RBP11.51□□□□□ -0.57
PBRM1-201ENST00000296302 GJB7Q6PEY0 223 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 FOXR1Q6PIV2 292 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 IFNEQ86WN2 208 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 TNIP3Q96KP6 325 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 PPP1R2P1Q96PQ5 205 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 PACSIN1Q9BY11 444 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 ILKAPQ9H0C8 392 aaPredicted RBP11.51□□□□□ -0.57
PBRM1-201ENST00000296302 FAM49AQ9H0Q0 323 aaPredicted RBP11.51□□□□□ -0.57
PBRM1-201ENST00000296302 GDF3Q9NR23 364 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 TARBP1Q13395 1621 aaKnown RBP11.51□□□□□ -0.57
PBRM1-201ENST00000296302 RNF17Q9BXT8 1623 aaKnown RBP11.51□□□□□ -0.57
PBRM1-201ENST00000296302 NPHP4O75161 1426 aaPredicted RBP11.51□□□□□ -0.57
PBRM1-201ENST00000296302 H2AFYO75367 372 aaKnown RBP11.51□□□□□ -0.57
PBRM1-201ENST00000296302 HLA-DRAP01903 254 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 PYGLP06737 847 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 ATXN3P54252 364 aaPredicted RBP11.51□□□□□ -0.57
PBRM1-201ENST00000296302 ZNF844Q08AG5 666 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 GRB10Q13322 594 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 MROH9Q5TGP6 573 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 LDHDQ86WU2 507 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 C1orf131Q8NDD1 294 aaKnown RBP11.51□□□□□ -0.57
PBRM1-201ENST00000296302 PPP2R3CQ969Q6 453 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 ZNF560Q96MR9 790 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 AGXT2Q9BYV1 514 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 ARHGEF38Q9NXL2 777 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 PCDHGB4Q9UN71 923 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 ABCA6Q8N139 1617 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 SALL3Q9BXA9 1300 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 FAM196BA6NMK8 535 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 SLC34A1Q06495 639 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 Q3C1V9 767 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 TRIM45Q9H8W5 580 aaPredicted RBP11.51□□□□□ -0.57
PBRM1-201ENST00000296302 EFCAB1Q9HAE3 211 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 AXIN2Q9Y2T1 843 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 ALKQ9UM73 1620 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 TRAPPC3O43617 180 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 RAD17O75943 681 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 SARSP49591 514 aaKnown RBP11.51□□□□□ -0.57
PBRM1-201ENST00000296302 TSPY1Q01534 308 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 R3HDM1Q15032 1099 aaKnown RBP11.51□□□□□ -0.57
PBRM1-201ENST00000296302 PDK1Q15118 436 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 RASA2Q15283 850 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 CCDC85BQ15834 202 aaPredicted RBP11.51□□□□□ -0.57
PBRM1-201ENST00000296302 XKR3Q5GH77 459 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 EFHC1Q5JVL4 640 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 C6orf10Q5SRN2 563 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 IRGCQ6NXR0 463 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 EFL1Q7Z2Z2 1120 aaKnown RBP11.51□□□□□ -0.57
PBRM1-201ENST00000296302 TMC3Q7Z5M5 1100 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 MFN1Q8IWA4 741 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 ZNF786Q8N393 782 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 CALML6Q8TD86 181 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 PGM2Q96G03 612 aa11.51□□□□□ -0.57
PBRM1-201ENST00000296302 GPBP1L1Q9HC44 474 aaPredicted RBP11.51□□□□□ -0.57
PBRM1-201ENST00000296302 ARPP19P56211 112 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 MXD4Q14582 209 aaPredicted RBP11.5□□□□□ -0.57
PBRM1-201ENST00000296302 KRT72Q14CN4 511 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 TRIM60Q495X7 471 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 PREPLQ4J6C6 727 aaPredicted RBP11.5□□□□□ -0.57
PBRM1-201ENST00000296302 FAM71DQ8N9W8 422 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 APBB2Q92870 758 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 AGAP3Q96P47 875 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 DCDC2Q9UHG0 476 aa11.5□□□□□ -0.57
PBRM1-201ENST00000296302 SLC8A2Q9UPR5 921 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms