RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 CORO7P57737 925 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 TMEM62Q0P6H9 643 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 TAF5Q15542 800 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 PTPN20Q4JDL3 420 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 AGBL2Q5U5Z8 902 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 RHBDF2Q6PJF5 856 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 MPZL3Q6UWV2 235 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 ARMCX2Q7L311 632 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 ZBTB8OSQ8IWT0 167 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 RHOT1Q8IXI2 618 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 ARFGAP1Q8N6T3 406 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 C1orf127Q8N9H9 656 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 LACTBL1A8MY62 500 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 PIAS1O75925 651 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 ITGB3P05106 788 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 CHN1P15882 459 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 RFC1P35251 1148 aaPredicted RBP12.48□□□□□ -0.41
RHO-201ENST00000296271 DYNLT1P63172 113 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 CALCOCO2Q13137 446 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 JADE1Q6IE81 842 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 AFG1LQ8WV93 481 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 C9orf72Q96LT7 481 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 FZD8Q9H461 694 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 PARVAQ9NVD7 372 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 MTRF1LQ9UGC7 380 aaKnown RBP12.48□□□□□ -0.41
RHO-201ENST00000296271 KCNH4Q9UQ05 1017 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 GINS2Q9Y248 185 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 NEU2Q9Y3R4 380 aa12.48□□□□□ -0.41
RHO-201ENST00000296271 ACKR2O00590 384 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 BANF1O75531 89 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 C22orf31O95567 290 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 IFNAR2P48551 515 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 GAD2Q05329 585 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 C1QBPQ07021 282 aaKnown RBP12.47□□□□□ -0.41
RHO-201ENST00000296271 ARHGAP1Q07960 439 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 AUHQ13825 339 aaKnown RBP12.47□□□□□ -0.41
RHO-201ENST00000296271 MXD4Q14582 209 aaPredicted RBP12.47□□□□□ -0.41
RHO-201ENST00000296271 LRRC14Q15048 493 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 DCUN1D2Q6PH85 259 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 MAMDC4Q6UXC1 1216 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 CAPN12Q6ZSI9 719 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 TSHZ1Q6ZSZ6 1077 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.47□□□□□ -0.41
RHO-201ENST00000296271 JPH2Q9BR39 696 aaPredicted RBP12.47□□□□□ -0.41
RHO-201ENST00000296271 ZWILCHQ9H900 591 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 TBK1Q9UHD2 729 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 CXCL11O14625 94 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 RGS16O15492 202 aaPredicted RBP12.47□□□□□ -0.41
RHO-201ENST00000296271 KRT1P04264 644 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 CD48P09326 243 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 RARGP13631 454 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 IL1R2P27930 398 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 SLC1A1P43005 524 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 ENPEPQ07075 957 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 NFX1Q12986 1120 aaKnown RBP12.47□□□□□ -0.41
RHO-201ENST00000296271 SGSM1Q2NKQ1 1148 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 SH3PXD2AQ5TCZ1 1133 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 DNAJC24Q6P3W2 148 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 PLPPR4Q7Z2D5 763 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 CYP4X1Q8N118 509 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 MGARPQ8TDB4 240 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 SLITRK1Q96PX8 696 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 CPXM1Q96SM3 734 aa12.47□□□□□ -0.41
RHO-201ENST00000296271 TRIP11Q15643 1979 aa12.46□□□□□ -0.41
RHO-201ENST00000296271 TRAPPC3O43617 180 aa12.46□□□□□ -0.41
RHO-201ENST00000296271 LGALS2P05162 132 aa12.46□□□□□ -0.41
RHO-201ENST00000296271 STAG3L1P0CL83 205 aa12.46□□□□□ -0.41
RHO-201ENST00000296271 IFT88Q13099 833 aa12.46□□□□□ -0.41
RHO-201ENST00000296271 BYSLQ13895 437 aaKnown RBP12.46□□□□□ -0.41
RHO-201ENST00000296271 FASTKD3Q14CZ7 662 aaKnown RBP12.46□□□□□ -0.41
RHO-201ENST00000296271 TAPT1Q6NXT6 567 aa12.46□□□□□ -0.41
RHO-201ENST00000296271 ERICH1Q86X53 443 aa12.46□□□□□ -0.41
RHO-201ENST00000296271 KATNAL2Q8IYT4 538 aa12.46□□□□□ -0.41
RHO-201ENST00000296271 UBA3Q8TBC4 463 aa12.46□□□□□ -0.41
RHO-201ENST00000296271 KCNN1Q92952 543 aa12.46□□□□□ -0.41
RHO-201ENST00000296271 TRIM11Q96F44 468 aa12.46□□□□□ -0.41
RHO-201ENST00000296271 PIWIL1Q96J94 861 aaKnown RBP12.46□□□□□ -0.41
RHO-201ENST00000296271 FAM167AQ96KS9 214 aa12.46□□□□□ -0.41
RHO-201ENST00000296271 SCLT1Q96NL6 688 aa12.46□□□□□ -0.41
RHO-201ENST00000296271 LPIN3Q9BQK8 851 aa12.46□□□□□ -0.41
RHO-201ENST00000296271 MRPL47Q9HD33 250 aaKnown RBP12.46□□□□□ -0.41
RHO-201ENST00000296271 KCNG1Q9UIX4 513 aa12.46□□□□□ -0.41
RHO-201ENST00000296271 AKT3Q9Y243 479 aa12.46□□□□□ -0.41
RHO-201ENST00000296271 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.46□□□□□ -0.41
RHO-201ENST00000296271 LRRD1A4D1F6 860 aa12.46□□□□□ -0.42
RHO-201ENST00000296271 GMNCA6NCL1 334 aa12.46□□□□□ -0.42
RHO-201ENST00000296271 ADCY6O43306 1168 aa12.46□□□□□ -0.42
RHO-201ENST00000296271 SLC25A27O95847 323 aa12.46□□□□□ -0.42
RHO-201ENST00000296271 ATF2P15336 505 aa12.46□□□□□ -0.42
RHO-201ENST00000296271 ADORA2AP29274 412 aa12.46□□□□□ -0.42
RHO-201ENST00000296271 LACTBP83111 547 aaPredicted RBP12.46□□□□□ -0.42
RHO-201ENST00000296271 PPIL2Q13356 520 aa12.46□□□□□ -0.42
RHO-201ENST00000296271 PTK6Q13882 451 aa12.46□□□□□ -0.42
RHO-201ENST00000296271 CLUL1Q15846 466 aa12.46□□□□□ -0.42
RHO-201ENST00000296271 AMHR2Q16671 573 aa12.46□□□□□ -0.42
RHO-201ENST00000296271 P3H1Q32P28 736 aa12.46□□□□□ -0.42
RHO-201ENST00000296271 GSTA5Q7RTV2 222 aa12.46□□□□□ -0.42
RHO-201ENST00000296271 ATL2Q8NHH9 583 aa12.46□□□□□ -0.42
RHO-201ENST00000296271 TCP11Q8WWU5 503 aa12.46□□□□□ -0.42
RHO-201ENST00000296271 SNF8Q96H20 258 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms