RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 FAM173BQ6P4H8 233 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 PPP4R3CPQ6ZMV5 832 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 SYT13Q7L8C5 426 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 ELMOD1Q8N336 334 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 SPATA32Q96LK8 384 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 PPP1R10Q96QC0 940 aaKnown RBP17.07■□□□□ 0.32
UBXN1-201ENST00000294119 USP28Q96RU2 1077 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 MTRQ99707 1265 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 CCDC86Q9H6F5 360 aaKnown RBP17.07■□□□□ 0.32
UBXN1-201ENST00000294119 TFIP11Q9UBB9 837 aaKnown RBP17.07■□□□□ 0.32
UBXN1-201ENST00000294119 DKK4Q9UBT3 224 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 MYO16Q9Y6X6 1858 aa17.06■□□□□ 0.32
UBXN1-201ENST00000294119 I3L4J1 428 aa17.06■□□□□ 0.32
UBXN1-201ENST00000294119 TK2O00142 265 aa17.06■□□□□ 0.32
UBXN1-201ENST00000294119 DKC1O60832 514 aaKnown RBP eCLIP17.06■□□□□ 0.32
UBXN1-201ENST00000294119 APBB3O95704 486 aa17.06■□□□□ 0.32
UBXN1-201ENST00000294119 PRB1P04280 392 aa17.06■□□□□ 0.32
UBXN1-201ENST00000294119 P4HBP07237 508 aaKnown RBP17.06■□□□□ 0.32
UBXN1-201ENST00000294119 YWHABP31946 246 aaKnown RBP17.06■□□□□ 0.32
UBXN1-201ENST00000294119 ARL2P36404 184 aa17.06■□□□□ 0.32
UBXN1-201ENST00000294119 BRCC3P46736 316 aa17.06■□□□□ 0.32
UBXN1-201ENST00000294119 STK38Q15208 465 aa17.06■□□□□ 0.32
UBXN1-201ENST00000294119 SF3A1Q15459 793 aaKnown RBP17.06■□□□□ 0.32
UBXN1-201ENST00000294119 FOXD4L6Q3SYB3 417 aaPredicted RBP17.06■□□□□ 0.32
UBXN1-201ENST00000294119 ARL6IP4Q66PJ3 421 aaKnown RBP17.06■□□□□ 0.32
UBXN1-201ENST00000294119 FOXD4L3Q6VB84 417 aaPredicted RBP17.06■□□□□ 0.32
UBXN1-201ENST00000294119 CCNI2Q6ZMN8 369 aaPredicted RBP17.06■□□□□ 0.32
UBXN1-201ENST00000294119 CYP2U1Q7Z449 544 aa17.06■□□□□ 0.32
UBXN1-201ENST00000294119 HAUS6Q7Z4H7 955 aa17.06■□□□□ 0.32
UBXN1-201ENST00000294119 LINC00301Q8NCQ3 95 aa17.06■□□□□ 0.32
UBXN1-201ENST00000294119 SLITRK6Q9H5Y7 841 aa17.06■□□□□ 0.32
UBXN1-201ENST00000294119 AFF4Q9UHB7 1163 aaKnown RBP17.06■□□□□ 0.32
UBXN1-201ENST00000294119 RAXQ9Y2V3 346 aa17.06■□□□□ 0.32
UBXN1-201ENST00000294119 PTPRDP23468 1912 aa17.06■□□□□ 0.32
UBXN1-201ENST00000294119 A0A1W2PRU2 124 aa17.05■□□□□ 0.32
UBXN1-201ENST00000294119 FAM205CA6NFA0 338 aa17.05■□□□□ 0.32
UBXN1-201ENST00000294119 TRAPPC3O43617 180 aa17.05■□□□□ 0.32
UBXN1-201ENST00000294119 PPP6R2O75170 966 aa17.05■□□□□ 0.32
UBXN1-201ENST00000294119 EGFP01133 1207 aa17.05■□□□□ 0.32
UBXN1-201ENST00000294119 ATP2B1P20020 1258 aa17.05■□□□□ 0.32
UBXN1-201ENST00000294119 GLRA2P23416 452 aa17.05■□□□□ 0.32
UBXN1-201ENST00000294119 RDXP35241 583 aaKnown RBP17.05■□□□□ 0.32
UBXN1-201ENST00000294119 GRSF1Q12849 480 aaKnown RBP eCLIP17.05■□□□□ 0.32
UBXN1-201ENST00000294119 LURAP1LQ8IV03 231 aa17.05■□□□□ 0.32
UBXN1-201ENST00000294119 SLFN12Q8IYM2 578 aa17.05■□□□□ 0.32
UBXN1-201ENST00000294119 BEST2Q8NFU1 509 aa17.05■□□□□ 0.32
UBXN1-201ENST00000294119 PRIMPOLQ96LW4 560 aa17.05■□□□□ 0.32
UBXN1-201ENST00000294119 DNAJC25Q9H1X3 360 aa17.05■□□□□ 0.32
UBXN1-201ENST00000294119 KCNMB3Q9NPA1 279 aa17.05■□□□□ 0.32
UBXN1-201ENST00000294119 FBXL5Q9UKA1 691 aa17.05■□□□□ 0.32
UBXN1-201ENST00000294119 PCDHB6Q9Y5E3 794 aa17.05■□□□□ 0.32
UBXN1-201ENST00000294119 CLIC4Q9Y696 253 aa17.05■□□□□ 0.32
UBXN1-201ENST00000294119 TRIP11Q15643 1979 aa17.05■□□□□ 0.32
UBXN1-201ENST00000294119 OTOL1A6NHN0 477 aaPredicted RBP17.04■□□□□ 0.32
UBXN1-201ENST00000294119 TTLL13PA6NNM8 815 aa17.04■□□□□ 0.32
UBXN1-201ENST00000294119 ZBTB39O15060 712 aa17.04■□□□□ 0.32
UBXN1-201ENST00000294119 SPTLC2O15270 562 aa17.04■□□□□ 0.32
UBXN1-201ENST00000294119 MARCH6O60337 910 aa17.04■□□□□ 0.32
UBXN1-201ENST00000294119 NEMFO60524 1076 aa17.04■□□□□ 0.32
UBXN1-201ENST00000294119 BCKDHBP21953 392 aa17.04■□□□□ 0.32
UBXN1-201ENST00000294119 GBP1P32455 592 aa17.04■□□□□ 0.32
UBXN1-201ENST00000294119 MCM7P33993 719 aa17.04■□□□□ 0.32
UBXN1-201ENST00000294119 PRPHP41219 470 aa17.04■□□□□ 0.32
UBXN1-201ENST00000294119 ZNF174Q15697 407 aa17.04■□□□□ 0.32
UBXN1-201ENST00000294119 FAM187BQ17R55 369 aa17.04■□□□□ 0.32
UBXN1-201ENST00000294119 TRIM61Q5EBN2 209 aa17.04■□□□□ 0.32
UBXN1-201ENST00000294119 LEO1Q8WVC0 666 aaPredicted RBP17.04■□□□□ 0.32
UBXN1-201ENST00000294119 ADAMTS14Q8WXS8 1223 aa17.04■□□□□ 0.32
UBXN1-201ENST00000294119 EZH1Q92800 747 aaPredicted RBP17.04■□□□□ 0.32
UBXN1-201ENST00000294119 UROC1Q96N76 676 aa17.04■□□□□ 0.32
UBXN1-201ENST00000294119 UBL7Q96S82 380 aaPredicted RBP17.04■□□□□ 0.32
UBXN1-201ENST00000294119 FAM83CQ9BQN1 747 aa17.04■□□□□ 0.32
UBXN1-201ENST00000294119 PDZD7Q9H5P4 517 aa17.04■□□□□ 0.32
UBXN1-201ENST00000294119 FBRSL1Q9HCM7 1045 aaKnown RBP17.04■□□□□ 0.32
UBXN1-201ENST00000294119 HPS4Q9NQG7 708 aa17.04■□□□□ 0.32
UBXN1-201ENST00000294119 TCHHQ07283 1943 aa17.04■□□□□ 0.32
UBXN1-201ENST00000294119 SHROOM3Q8TF72 1996 aa17.03■□□□□ 0.32
UBXN1-201ENST00000294119 PCDH15Q96QU1 1955 aa17.03■□□□□ 0.32
UBXN1-201ENST00000294119 SYN3O14994 580 aa17.03■□□□□ 0.32
UBXN1-201ENST00000294119 SLC37A4O43826 429 aa17.03■□□□□ 0.32
UBXN1-201ENST00000294119 VNN2O95498 520 aa17.03■□□□□ 0.32
UBXN1-201ENST00000294119 PRAMEF12O95522 483 aa17.03■□□□□ 0.32
UBXN1-201ENST00000294119 ENGP17813 658 aa17.03■□□□□ 0.32
UBXN1-201ENST00000294119 ATP2C1P98194 919 aaPredicted RBP17.03■□□□□ 0.32
UBXN1-201ENST00000294119 CEBPZQ03701 1054 aaKnown RBP17.03■□□□□ 0.32
UBXN1-201ENST00000294119 PTPAQ15257 358 aa17.03■□□□□ 0.32
UBXN1-201ENST00000294119 PEAR1Q5VY43 1037 aaPredicted RBP17.03■□□□□ 0.32
UBXN1-201ENST00000294119 SLC23A3Q6PIS1 610 aa17.03■□□□□ 0.32
UBXN1-201ENST00000294119 GAREM2Q75VX8 874 aa17.03■□□□□ 0.32
UBXN1-201ENST00000294119 RASSF3Q86WH2 238 aa17.03■□□□□ 0.32
UBXN1-201ENST00000294119 GPIHBP1Q8IV16 184 aa17.03■□□□□ 0.32
UBXN1-201ENST00000294119 MDM1Q8TC05 714 aa17.03■□□□□ 0.32
UBXN1-201ENST00000294119 BPIFB1Q8TDL5 484 aa17.03■□□□□ 0.32
UBXN1-201ENST00000294119 LXNQ9BS40 222 aa17.03■□□□□ 0.32
UBXN1-201ENST00000294119 FZD8Q9H461 694 aa17.03■□□□□ 0.32
UBXN1-201ENST00000294119 ATMQ13315 3056 aa17.03■□□□□ 0.32
UBXN1-201ENST00000294119 SPTA1P02549 2419 aa17.02■□□□□ 0.32
UBXN1-201ENST00000294119 GOLGA6L4A6NEF3 574 aa17.02■□□□□ 0.32
UBXN1-201ENST00000294119 DRD1P21728 446 aa17.02■□□□□ 0.32
UBXN1-201ENST00000294119 MCM4P33991 863 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms