RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 NDNQ99608 321 aa12.73□□□□□ -0.37
CLPB-201ENST00000294053 DCLRE1BQ9H816 532 aa12.73□□□□□ -0.37
CLPB-201ENST00000294053 WDR81Q562E7 1941 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 CYP26A1O43174 497 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 ZBED4O75132 1171 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 NPTXRO95502 500 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 ATF2P15336 505 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 CHRNB2P17787 502 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 CETN2P41208 172 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 PIK3CAP42336 1068 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 NPTX2P47972 431 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 WDR4P57081 412 aaKnown RBP12.72□□□□□ -0.37
CLPB-201ENST00000294053 SLC39A4Q6P5W5 647 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 MCF2L2Q86YR7 1114 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.72□□□□□ -0.37
CLPB-201ENST00000294053 ANKRD35Q8N283 1001 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 SLC25A41Q8N5S1 370 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 HIPK4Q8NE63 616 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 LPAR1Q92633 364 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 ACCSQ96QU6 501 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 CHST7Q9NS84 486 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 GABBR1Q9UBS5 961 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 WASF2Q9Y6W5 498 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 SYNGAP1Q96PV0 1343 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 FAM47DPA6NHR8 397 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 GOLGA8SH3BPF8 625 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 GOLGA8MH3BSY2 632 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 TMEM253P0C7T8 217 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 SNRNP35Q16560 246 aaKnown RBP12.72□□□□□ -0.37
CLPB-201ENST00000294053 SLC5A9Q2M3M2 681 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 OLFML2BQ68BL8 750 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 MTHFD1LQ6UB35 978 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 PPP1R21Q6ZMI0 780 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 ZNF365Q70YC5 407 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 SNRNP27Q8WVK2 155 aaKnown RBP12.72□□□□□ -0.37
CLPB-201ENST00000294053 SERPINB12Q96P63 405 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 CCDC134Q9H6E4 229 aa12.72□□□□□ -0.37
CLPB-201ENST00000294053 CHCHD3Q9NX63 227 aaKnown RBP12.72□□□□□ -0.37
CLPB-201ENST00000294053 DENND3A2RUS2 1198 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 TTC4O95801 387 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 MXI1P50539 228 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 NEK3P51956 506 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 GTF2BQ00403 316 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 FOXB2Q5VYV0 432 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 SCARA3Q6AZY7 606 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 CEP128Q6ZU80 1094 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 CYFIP1Q7L576 1253 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 NLRP9Q7RTR0 991 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 NOP9Q86U38 636 aaKnown RBP12.71□□□□□ -0.37
CLPB-201ENST00000294053 SLC9A9Q8IVB4 645 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 TMEM161BQ8NDZ6 487 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 NMD3Q96D46 503 aaKnown RBP12.71□□□□□ -0.37
CLPB-201ENST00000294053 AGPAT1Q99943 283 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 ARMCX1Q9P291 453 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 DCTN3O75935 186 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 NR3C2P08235 984 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 WNT7BP56706 349 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 PPATQ06203 517 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 DALRD3Q5D0E6 543 aaKnown RBP12.71□□□□□ -0.37
CLPB-201ENST00000294053 SWSAP1Q6NVH7 229 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 TAS1R2Q8TE23 839 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 SLC7A6OSQ96CW6 309 aaPredicted RBP12.71□□□□□ -0.37
CLPB-201ENST00000294053 CEP170P1Q96L14 293 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 FAM161BQ96MY7 647 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 ZSWIM1Q9BR11 485 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 LRMDAQ9H2I8 198 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 LRCH1Q9Y2L9 728 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 UBE4BO95155 1302 aa12.71□□□□□ -0.37
CLPB-201ENST00000294053 ZNFX1Q9P2E3 1918 aaKnown RBP12.71□□□□□ -0.38
CLPB-201ENST00000294053 CCNB1P14635 433 aa12.71□□□□□ -0.38
CLPB-201ENST00000294053 MUTP22033 750 aa12.71□□□□□ -0.38
CLPB-201ENST00000294053 SSTR3P32745 418 aaPredicted RBP12.71□□□□□ -0.38
CLPB-201ENST00000294053 RPA3P35244 121 aaPredicted RBP12.71□□□□□ -0.38
CLPB-201ENST00000294053 PSMC5P62195 406 aa12.71□□□□□ -0.38
CLPB-201ENST00000294053 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.71□□□□□ -0.38
CLPB-201ENST00000294053 KAZNQ674X7 775 aa12.71□□□□□ -0.38
CLPB-201ENST00000294053 RNF43Q68DV7 783 aa12.71□□□□□ -0.38
CLPB-201ENST00000294053 LLGL2Q6P1M3 1020 aa12.71□□□□□ -0.38
CLPB-201ENST00000294053 LRRC74BQ6ZQY2 392 aa12.71□□□□□ -0.38
CLPB-201ENST00000294053 SLC13A5Q86YT5 568 aaPredicted RBP12.71□□□□□ -0.38
CLPB-201ENST00000294053 CCDC60Q8IWA6 550 aaPredicted RBP12.71□□□□□ -0.38
CLPB-201ENST00000294053 ZNF333Q96JL9 665 aa12.71□□□□□ -0.38
CLPB-201ENST00000294053 ROPN1BQ9BZX4 212 aaPredicted RBP12.71□□□□□ -0.38
CLPB-201ENST00000294053 ROPN1Q9HAT0 212 aaPredicted RBP12.71□□□□□ -0.38
CLPB-201ENST00000294053 PREBQ9HCU5 417 aa12.71□□□□□ -0.38
CLPB-201ENST00000294053 PRKAG3Q9UGI9 489 aa12.71□□□□□ -0.38
CLPB-201ENST00000294053 USTQ9Y2C2 406 aa12.71□□□□□ -0.38
CLPB-201ENST00000294053 WDR64B1ANS9 1081 aa12.7□□□□□ -0.38
CLPB-201ENST00000294053 TBX10O75333 385 aa12.7□□□□□ -0.38
CLPB-201ENST00000294053 BRCA1P38398 1863 aaKnown RBP12.7□□□□□ -0.38
CLPB-201ENST00000294053 SPARCL1Q14515 664 aa12.7□□□□□ -0.38
CLPB-201ENST00000294053 TMEM132BQ14DG7 1078 aa12.7□□□□□ -0.38
CLPB-201ENST00000294053 ACSBG2Q5FVE4 666 aa12.7□□□□□ -0.38
CLPB-201ENST00000294053 ANGEL2Q5VTE6 544 aaKnown RBP12.7□□□□□ -0.38
CLPB-201ENST00000294053 IRGCQ6NXR0 463 aa12.7□□□□□ -0.38
CLPB-201ENST00000294053 TRMT10CQ7L0Y3 403 aaKnown RBP12.7□□□□□ -0.38
CLPB-201ENST00000294053 KCTD17Q8N5Z5 321 aa12.7□□□□□ -0.38
CLPB-201ENST00000294053 SGIP1Q9BQI5 828 aa12.7□□□□□ -0.38
CLPB-201ENST00000294053 TMEM206Q9H813 350 aa12.7□□□□□ -0.38
CLPB-201ENST00000294053 SAYSD1Q9NPB0 183 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms