RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 ASRGL1Q7L266 308 aa17.81■□□□□ 0.44
CHRNE-201ENST00000293780 C4orf33Q8N1A6 199 aa17.81■□□□□ 0.44
CHRNE-201ENST00000293780 AGBL3Q8NEM8 1001 aa17.81■□□□□ 0.44
CHRNE-201ENST00000293780 ZNRF3Q9ULT6 936 aa17.81■□□□□ 0.44
CHRNE-201ENST00000293780 SCINQ9Y6U3 715 aa17.81■□□□□ 0.44
CHRNE-201ENST00000293780 CST3P01034 146 aaPredicted RBP17.8■□□□□ 0.44
CHRNE-201ENST00000293780 GLRA2P23416 452 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 C1QBPQ07021 282 aaKnown RBP17.8■□□□□ 0.44
CHRNE-201ENST00000293780 MYO1EQ12965 1108 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 RNF43Q68DV7 783 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 RTKN2Q8IZC4 609 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 CFAP57Q96MR6 1250 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 MCEEQ96PE7 176 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 SLCO1B3Q9NPD5 702 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 FBXO40Q9UH90 709 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 TMEM191CA6NGB0 347 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 MAFGO15525 162 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 ANP32DO95626 131 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 ABHD2P08910 425 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 TMEM191BP0C7N4 346 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 ALADP13716 330 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 ZNF394Q53GI3 561 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 RCOR2Q8IZ40 523 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 KIRREL3Q8IZU9 778 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 ALLCQ8N6M5 410 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 DENND1AQ8TEH3 1009 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 MSTO1Q9BUK6 570 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 C10orf88Q9H8K7 445 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 IP6K2Q9UHH9 426 aa17.8■□□□□ 0.44
CHRNE-201ENST00000293780 GOLGA8SH3BPF8 625 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 GOLGA8MH3BSY2 632 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 K7ERI5 159 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 DKC1O60832 514 aaKnown RBP eCLIP17.79■□□□□ 0.44
CHRNE-201ENST00000293780 MMP8P22894 467 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 EAPPQ56P03 285 aaPredicted RBP17.79■□□□□ 0.44
CHRNE-201ENST00000293780 XRRA1Q6P2D8 792 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 L3MBTL3Q96JM7 780 aaPredicted RBP17.79■□□□□ 0.44
CHRNE-201ENST00000293780 PLCD4Q9BRC7 762 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 TRABDQ9H4I3 376 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 VPS37BQ9H9H4 285 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 EBF2Q9HAK2 575 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 CNTNAP2Q9UHC6 1331 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 TTLL13PA6NNM8 815 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 PIAS1O75925 651 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 MSH2P43246 934 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 NCOA4Q13772 614 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 WDR72Q3MJ13 1102 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 XKR3Q5GH77 459 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 SPOCD1Q6ZMY3 1216 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 ZBED8Q8IZ13 594 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 NSUN6Q8TEA1 469 aaKnown RBP17.79■□□□□ 0.44
CHRNE-201ENST00000293780 TMEM121Q9BTD3 319 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 MYLK2Q9H1R3 596 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 FZD1Q9UP38 647 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 CNTN6Q9UQ52 1028 aa17.79■□□□□ 0.44
CHRNE-201ENST00000293780 MYH9P35579 1960 aaKnown RBP17.79■□□□□ 0.44
CHRNE-201ENST00000293780 A0A1W2PPM1 405 aa17.78■□□□□ 0.44
CHRNE-201ENST00000293780 TJP3O95049 919 aa17.78■□□□□ 0.44
CHRNE-201ENST00000293780 IFNB1P01574 187 aa17.78■□□□□ 0.44
CHRNE-201ENST00000293780 KRT15P19012 456 aa17.78■□□□□ 0.44
CHRNE-201ENST00000293780 BRD2P25440 801 aaKnown RBP17.78■□□□□ 0.44
CHRNE-201ENST00000293780 RPA3P35244 121 aaPredicted RBP17.78■□□□□ 0.44
CHRNE-201ENST00000293780 GAD2Q05329 585 aa17.78■□□□□ 0.44
CHRNE-201ENST00000293780 NIM1KQ8IY84 436 aa17.78■□□□□ 0.44
CHRNE-201ENST00000293780 DEPTORQ8TB45 409 aa17.78■□□□□ 0.44
CHRNE-201ENST00000293780 NSMCE1Q8WV22 266 aa17.78■□□□□ 0.44
CHRNE-201ENST00000293780 MIEF2Q96C03 454 aa17.78■□□□□ 0.44
CHRNE-201ENST00000293780 RBM41Q96IZ5 413 aaKnown RBP17.78■□□□□ 0.44
CHRNE-201ENST00000293780 CGRRF1Q99675 332 aa17.78■□□□□ 0.44
CHRNE-201ENST00000293780 SAE1Q9UBE0 346 aaPredicted RBP17.78■□□□□ 0.44
CHRNE-201ENST00000293780 PHTF1Q9UMS5 762 aa17.78■□□□□ 0.44
CHRNE-201ENST00000293780 CETN2P41208 172 aa17.78■□□□□ 0.44
CHRNE-201ENST00000293780 LMNB2Q03252 620 aa17.78■□□□□ 0.44
CHRNE-201ENST00000293780 ACVR2BQ13705 512 aa17.78■□□□□ 0.44
CHRNE-201ENST00000293780 CCDC142Q17RM4 750 aa17.78■□□□□ 0.44
CHRNE-201ENST00000293780 ANKMY2Q8IV38 441 aa17.78■□□□□ 0.44
CHRNE-201ENST00000293780 RIBC1Q8N443 379 aaPredicted RBP17.78■□□□□ 0.44
CHRNE-201ENST00000293780 REPS2Q8NFH8 660 aa17.78■□□□□ 0.44
CHRNE-201ENST00000293780 NFASCO94856 1347 aa17.78■□□□□ 0.44
CHRNE-201ENST00000293780 A0A0B4J269 797 aa17.77■□□□□ 0.44
CHRNE-201ENST00000293780 H0YCG3 227 aa17.77■□□□□ 0.44
CHRNE-201ENST00000293780 SUPT20HL2P0C7V6 817 aa17.77■□□□□ 0.44
CHRNE-201ENST00000293780 GBP2P32456 591 aaPredicted RBP17.77■□□□□ 0.44
CHRNE-201ENST00000293780 TNFSF9P41273 254 aa17.77■□□□□ 0.44
CHRNE-201ENST00000293780 R3HDM1Q15032 1099 aaKnown RBP17.77■□□□□ 0.44
CHRNE-201ENST00000293780 SLC1A5Q15758 541 aa17.77■□□□□ 0.44
CHRNE-201ENST00000293780 SUPT20HL1Q3ZLR7 823 aa17.77■□□□□ 0.44
CHRNE-201ENST00000293780 UTP4Q969X6 686 aaKnown RBP17.77■□□□□ 0.44
CHRNE-201ENST00000293780 FOXP3Q9BZS1 431 aa17.77■□□□□ 0.44
CHRNE-201ENST00000293780 PORCNQ9H237 461 aa17.77■□□□□ 0.44
CHRNE-201ENST00000293780 ETNK1Q9HBU6 452 aa17.77■□□□□ 0.44
CHRNE-201ENST00000293780 hCG_1818297A0A087WSY0 165 aa17.77■□□□□ 0.43
CHRNE-201ENST00000293780 CCNB1P14635 433 aa17.77■□□□□ 0.43
CHRNE-201ENST00000293780 TBXAS1P24557 533 aaPredicted RBP17.77■□□□□ 0.43
CHRNE-201ENST00000293780 ZNF132P52740 706 aa17.77■□□□□ 0.43
CHRNE-201ENST00000293780 PLCB3Q01970 1234 aa17.77■□□□□ 0.43
CHRNE-201ENST00000293780 FSTL1Q12841 308 aa17.77■□□□□ 0.43
CHRNE-201ENST00000293780 PDIA2Q13087 525 aaKnown RBP17.77■□□□□ 0.43
CHRNE-201ENST00000293780 OASLQ15646 514 aaKnown RBP17.77■□□□□ 0.43
CHRNE-201ENST00000293780 RNASEH2BQ5TBB1 312 aaKnown RBP17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms