RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 JAK3P52333 1124 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 AP1B1Q10567 949 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 DRAP1Q14919 205 aaPredicted RBP12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 DNAL1Q4LDG9 190 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 IZUMO3Q5VZ72 239 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 TSEN34Q9BSV6 310 aaKnown RBP12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 PPCSQ9HAB8 311 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 MYH4Q9Y623 1939 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 E2F6O75461 281 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 KRT14P02533 472 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 KRT7P08729 469 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 TAL1P17542 331 aaPredicted RBP12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 SREBF1P36956 1147 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 IGBP1P78318 339 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 NIPA1Q7RTP0 329 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 APLFQ8IW19 511 aaPredicted RBP12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 OXER1Q8TDS5 423 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 FAM167AQ96KS9 214 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 FAM20AQ96MK3 541 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 NUP85Q9BW27 656 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 SENP6Q9GZR1 1112 aaPredicted RBP12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 MYBL1P10243 752 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 PAMP19021 973 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 PDIA2Q13087 525 aaKnown RBP12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 C4orf50Q6ZRC1 276 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 TRPM8Q7Z2W7 1104 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 SEPT1Q8WYJ6 367 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 USP6NLQ92738 828 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 GCOM2Q9BZD3 368 aaPredicted RBP12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 VPS11Q9H270 941 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 MTIF3Q9H2K0 278 aaKnown RBP12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 SLC9A2Q9UBY0 812 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 TTC7AQ9ULT0 858 aaPredicted RBP12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 ARHGAP26Q9UNA1 814 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 K7ERI5 159 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 CCND3P30281 292 aaPredicted RBP12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 SFNP31947 248 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 GPS1Q13098 491 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 NCAPHQ15003 741 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 MTFR1Q15390 333 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 NTRK3Q16288 839 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 SLC18A3Q16572 532 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 TC2NQ8N9U0 490 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 IRAK4Q9NWZ3 460 aa12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 PAIP2BQ9ULR5 123 aaKnown RBP12.45□□□□□ -0.42
SYNGAP1-201ENST00000293748 GOLGA8IPA6NC78 632 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 POTEMA6NI47 508 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 GOLGA8JA6NMD2 632 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 ARHGEF9O43307 516 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 KRT4P19013 534 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 NR1I3Q14994 352 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 MAPRE2Q15555 327 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 TRIM72Q6ZMU5 477 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 ALKBH8Q96BT7 664 aaKnown RBP12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 RPS6KC1Q96S38 1066 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 CHP1Q99653 195 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 JPH1Q9HDC5 661 aaPredicted RBP12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 PRDM5Q9NQX1 630 aaPredicted RBP12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 FAM217BQ9NTX9 383 aaPredicted RBP12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 ASNSD1Q9NWL6 643 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 TMEM260Q9NX78 707 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 STX18Q9P2W9 335 aaKnown RBP12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 SLC12A6Q9UHW9 1150 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 ZNF711Q9Y462 761 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 ABL1P00519 1130 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 CHN1P15882 459 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 ARL13BQ3SXY8 428 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 METTL7BQ6UX53 244 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 ENOSF1Q7L5Y1 443 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 ZBED8Q8IZ13 594 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 PSPC1Q8WXF1 523 aaKnown RBP12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 CYFIP2Q96F07 1278 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 SUCLA2Q9P2R7 463 aaPredicted RBP12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 CCT8L1PA6NM43 557 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 DNM1LO00429 736 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 ASAP2O43150 1006 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 RPLP2P05387 115 aaKnown RBP12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 HNRNPH1P31943 449 aaKnown RBP12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 GJA8P48165 433 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 GCLMP48507 274 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 CTTNQ14247 550 aaKnown RBP12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 EFTUD2Q15029 972 aaKnown RBP eCLIP12.44□□□□□ -0.428e-8■■■■■ 37.9
SYNGAP1-201ENST00000293748 SIX6OS1Q8N1H7 587 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 MMGT1Q8N4V1 131 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 C3orf20Q8ND61 904 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 MSTO1Q9BUK6 570 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 FOXP3Q9BZS1 431 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 TRABDQ9H4I3 376 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 ADA2Q9NZK5 511 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 FBXO2Q9UK22 296 aaPredicted RBP12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 ATP11BQ9Y2G3 1177 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 ENO4A6NNW6 628 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 PGK1P00558 417 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 ZNF667Q5HYK9 610 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 GJC2Q5T442 439 aaPredicted RBP12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 MOXD1Q6UVY6 613 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 GLYCTKQ8IVS8 523 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 ATL2Q8NHH9 583 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 DNAJC9Q8WXX5 260 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 RNF25Q96BH1 459 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms