RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 CYB561D2O14569 222 aa27.27■■□□□ 1.96
U2AF1-201ENST00000291552 EPHB3P54753 998 aa27.27■■□□□ 1.96
U2AF1-201ENST00000291552 SLC39A12Q504Y0 691 aa27.27■■□□□ 1.96
U2AF1-201ENST00000291552 STXBP5Q5T5C0 1151 aa27.27■■□□□ 1.96
U2AF1-201ENST00000291552 GAREM2Q75VX8 874 aa27.27■■□□□ 1.96
U2AF1-201ENST00000291552 PYM1Q9BRP8 204 aaKnown RBP27.27■■□□□ 1.96
U2AF1-201ENST00000291552 MKNK1Q9BUB5 465 aa27.27■■□□□ 1.96
U2AF1-201ENST00000291552 ZCWPW1Q9H0M4 648 aa27.27■■□□□ 1.96
U2AF1-201ENST00000291552 IL18RAPO95256 599 aa27.26■■□□□ 1.95
U2AF1-201ENST00000291552 FZD5Q13467 585 aa27.26■■□□□ 1.95
U2AF1-201ENST00000291552 E2F4Q16254 413 aa27.26■■□□□ 1.95
U2AF1-201ENST00000291552 WSCD1Q658N2 575 aa27.26■■□□□ 1.95
U2AF1-201ENST00000291552 ARMCX5Q6P1M9 558 aa27.26■■□□□ 1.95
U2AF1-201ENST00000291552 ZNF687Q8N1G0 1237 aa27.26■■□□□ 1.95
U2AF1-201ENST00000291552 GLIS3Q8NEA6 775 aa27.26■■□□□ 1.95
U2AF1-201ENST00000291552 CBWD1Q9BRT8 395 aa27.26■■□□□ 1.95
U2AF1-201ENST00000291552 TRMT61BQ9BVS5 477 aaKnown RBP27.26■■□□□ 1.95
U2AF1-201ENST00000291552 PANK4Q9NVE7 773 aa27.26■■□□□ 1.95
U2AF1-201ENST00000291552 EXOC7Q9UPT5 735 aa27.26■■□□□ 1.95
U2AF1-201ENST00000291552 ATF6P18850 670 aa27.25■■□□□ 1.95
U2AF1-201ENST00000291552 ALDH1A3P47895 512 aa27.25■■□□□ 1.95
U2AF1-201ENST00000291552 STK38Q15208 465 aa27.25■■□□□ 1.95
U2AF1-201ENST00000291552 LRRTM3Q86VH5 581 aa27.25■■□□□ 1.95
U2AF1-201ENST00000291552 CXorf38Q8TB03 319 aa27.25■■□□□ 1.95
U2AF1-201ENST00000291552 PSMG2Q969U7 264 aa27.25■■□□□ 1.95
U2AF1-201ENST00000291552 CLDN23Q96B33 292 aa27.25■■□□□ 1.95
U2AF1-201ENST00000291552 BCO2Q9BYV7 579 aa27.25■■□□□ 1.95
U2AF1-201ENST00000291552 BRD9Q9H8M2 597 aa27.25■■□□□ 1.95
U2AF1-201ENST00000291552 HSFX1Q9UBD0 423 aa27.25■■□□□ 1.95
U2AF1-201ENST00000291552 DSEQ9UL01 958 aa27.25■■□□□ 1.95
U2AF1-201ENST00000291552 GOLGA8IPA6NC78 632 aa27.24■■□□□ 1.95
U2AF1-201ENST00000291552 GOLGA8JA6NMD2 632 aa27.24■■□□□ 1.95
U2AF1-201ENST00000291552 ARNTLO00327 626 aa27.24■■□□□ 1.95
U2AF1-201ENST00000291552 PRPF6O94906 941 aaKnown RBP27.24■■□□□ 1.95
U2AF1-201ENST00000291552 PSMC3P17980 439 aa27.24■■□□□ 1.95
U2AF1-201ENST00000291552 GARTP22102 1010 aa27.24■■□□□ 1.95
U2AF1-201ENST00000291552 DNAJB7Q7Z6W7 309 aaPredicted RBP27.24■■□□□ 1.95
U2AF1-201ENST00000291552 NT5DC4Q86YG4 428 aa27.24■■□□□ 1.95
U2AF1-201ENST00000291552 ADSSL1Q8N142 457 aa27.24■■□□□ 1.95
U2AF1-201ENST00000291552 C1orf127Q8N9H9 656 aa27.24■■□□□ 1.95
U2AF1-201ENST00000291552 LPIN3Q9BQK8 851 aa27.24■■□□□ 1.95
U2AF1-201ENST00000291552 SLITRK6Q9H5Y7 841 aa27.24■■□□□ 1.95
U2AF1-201ENST00000291552 TFIP11Q9UBB9 837 aaKnown RBP27.24■■□□□ 1.95
U2AF1-201ENST00000291552 PCDHB13Q9Y5F0 798 aa27.24■■□□□ 1.95
U2AF1-201ENST00000291552 ZNF638Q14966 1978 aaKnown RBP27.24■■□□□ 1.95
U2AF1-201ENST00000291552 DMXL1Q9Y485 3027 aa27.23■■□□□ 1.95
U2AF1-201ENST00000291552 HEPACAM2A8MVW5 462 aa27.23■■□□□ 1.95
U2AF1-201ENST00000291552 KPNA7A9QM74 516 aa27.23■■□□□ 1.95
U2AF1-201ENST00000291552 SPTLC2O15270 562 aa27.23■■□□□ 1.95
U2AF1-201ENST00000291552 GDI1P31150 447 aa27.23■■□□□ 1.95
U2AF1-201ENST00000291552 ZNF852Q6ZMS4 543 aa27.23■■□□□ 1.95
U2AF1-201ENST00000291552 DEPDC1BQ8WUY9 529 aa27.23■■□□□ 1.95
U2AF1-201ENST00000291552 HPS3Q969F9 1004 aa27.23■■□□□ 1.95
U2AF1-201ENST00000291552 SPATA6Q9NWH7 488 aaPredicted RBP27.23■■□□□ 1.95
U2AF1-201ENST00000291552 ASB3Q9Y575 518 aa27.23■■□□□ 1.95
U2AF1-201ENST00000291552 DCHS1Q96JQ0 3298 aa27.22■■□□□ 1.95
U2AF1-201ENST00000291552 POLR2BP30876 1174 aaKnown RBP27.22■■□□□ 1.95
U2AF1-201ENST00000291552 TFAMQ00059 246 aaKnown RBP27.22■■□□□ 1.95
U2AF1-201ENST00000291552 ALCAMQ13740 583 aa27.22■■□□□ 1.95
U2AF1-201ENST00000291552 SV2CQ496J9 727 aa27.22■■□□□ 1.95
U2AF1-201ENST00000291552 GPIHBP1Q8IV16 184 aa27.22■■□□□ 1.95
U2AF1-201ENST00000291552 MFSD6LQ8IWD5 586 aa27.22■■□□□ 1.95
U2AF1-201ENST00000291552 SNX21Q969T3 373 aa27.22■■□□□ 1.95
U2AF1-201ENST00000291552 SEPT5Q99719 369 aaPredicted RBP27.22■■□□□ 1.95
U2AF1-201ENST00000291552 PCIF1Q9H4Z3 704 aa27.22■■□□□ 1.95
U2AF1-201ENST00000291552 TRPV5Q9NQA5 729 aa27.22■■□□□ 1.95
U2AF1-201ENST00000291552 TMLHEQ9NVH6 421 aa27.22■■□□□ 1.95
U2AF1-201ENST00000291552 RBAKQ9NYW8 714 aaPredicted RBP27.22■■□□□ 1.95
U2AF1-201ENST00000291552 ITGB3P05106 788 aa27.21■■□□□ 1.95
U2AF1-201ENST00000291552 MAGEA9P43362 315 aa27.21■■□□□ 1.95
U2AF1-201ENST00000291552 METTL23Q86XA0 190 aa27.21■■□□□ 1.95
U2AF1-201ENST00000291552 SYCP3Q8IZU3 236 aa27.21■■□□□ 1.95
U2AF1-201ENST00000291552 IRF7Q92985 503 aa27.21■■□□□ 1.95
U2AF1-201ENST00000291552 ZNF560Q96MR9 790 aa27.21■■□□□ 1.95
U2AF1-201ENST00000291552 LRRC3BQ96PB8 259 aa27.21■■□□□ 1.95
U2AF1-201ENST00000291552 GPR88Q9GZN0 384 aa27.21■■□□□ 1.95
U2AF1-201ENST00000291552 TNMDQ9H2S6 317 aa27.21■■□□□ 1.95
U2AF1-201ENST00000291552 IL21Q9HBE4 155 aa27.21■■□□□ 1.95
U2AF1-201ENST00000291552 KBTBD4Q9NVX7 518 aa27.21■■□□□ 1.95
U2AF1-201ENST00000291552 EXTL3O43909 919 aa27.2■■□□□ 1.94
U2AF1-201ENST00000291552 PPP6R2O75170 966 aa27.2■■□□□ 1.94
U2AF1-201ENST00000291552 GABRR2P28476 465 aa27.2■■□□□ 1.94
U2AF1-201ENST00000291552 HOXD13P35453 343 aa27.2■■□□□ 1.94
U2AF1-201ENST00000291552 MGAT5BQ3V5L5 792 aa27.2■■□□□ 1.94
U2AF1-201ENST00000291552 FOXD4L5Q5VV16 416 aaPredicted RBP27.2■■□□□ 1.94
U2AF1-201ENST00000291552 SHC4Q6S5L8 630 aa27.2■■□□□ 1.94
U2AF1-201ENST00000291552 CCDC65Q8IXS2 484 aa27.2■■□□□ 1.94
U2AF1-201ENST00000291552 FOXD4L4Q8WXT5 416 aaPredicted RBP27.2■■□□□ 1.94
U2AF1-201ENST00000291552 TRIM9Q9C026 710 aa27.2■■□□□ 1.94
U2AF1-201ENST00000291552 SEMA4AQ9H3S1 761 aa27.2■■□□□ 1.94
U2AF1-201ENST00000291552 PDE11AQ9HCR9 933 aa27.2■■□□□ 1.94
U2AF1-201ENST00000291552 SIX4Q9UIU6 781 aa27.2■■□□□ 1.94
U2AF1-201ENST00000291552 L1RE1Q9UN81 338 aa27.2■■□□□ 1.94
U2AF1-201ENST00000291552 AGAP1Q9UPQ3 857 aa27.2■■□□□ 1.94
U2AF1-201ENST00000291552 PTPRJQ12913 1337 aa27.19■■□□□ 1.94
U2AF1-201ENST00000291552 LMNAP02545 664 aaKnown RBP27.19■■□□□ 1.94
U2AF1-201ENST00000291552 RPS9P46781 194 aaKnown RBP27.19■■□□□ 1.94
U2AF1-201ENST00000291552 CYP4F8P98187 520 aa27.19■■□□□ 1.94
U2AF1-201ENST00000291552 ITIH5Q86UX2 942 aa27.19■■□□□ 1.94
U2AF1-201ENST00000291552 ARID3BQ8IVW6 561 aaPredicted RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms