RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 MRPS5P82675 430 aaKnown RBP28.86■■■□□ 2.21
SSU72-201ENST00000291386 ZNF699Q32M78 642 aa28.86■■■□□ 2.21
SSU72-201ENST00000291386 TCERG1LQ5VWI1 586 aa28.86■■■□□ 2.21
SSU72-201ENST00000291386 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.86■■■□□ 2.21
SSU72-201ENST00000291386 KREMEN2Q8NCW0 462 aa28.86■■■□□ 2.21
SSU72-201ENST00000291386 TAS1R2Q8TE23 839 aa28.86■■■□□ 2.21
SSU72-201ENST00000291386 COQ4Q9Y3A0 265 aa28.86■■■□□ 2.21
SSU72-201ENST00000291386 PRUNE2Q8WUY3 3088 aa28.85■■■□□ 2.21
SSU72-201ENST00000291386 TACC1O75410 805 aa28.85■■■□□ 2.21
SSU72-201ENST00000291386 PIK3CAP42336 1068 aa28.85■■■□□ 2.21
SSU72-201ENST00000291386 LHX1P48742 406 aa28.85■■■□□ 2.21
SSU72-201ENST00000291386 TNNC1P63316 161 aa28.85■■■□□ 2.21
SSU72-201ENST00000291386 GPR17Q13304 367 aa28.85■■■□□ 2.21
SSU72-201ENST00000291386 ADGRF2Q8IZF7 708 aa28.85■■■□□ 2.21
SSU72-201ENST00000291386 CMASQ8NFW8 434 aaPredicted RBP28.85■■■□□ 2.21
SSU72-201ENST00000291386 OR10T2Q8NGX3 314 aa28.85■■■□□ 2.21
SSU72-201ENST00000291386 THAP9Q9H5L6 903 aa28.85■■■□□ 2.21
SSU72-201ENST00000291386 SFXN1Q9H9B4 322 aa28.85■■■□□ 2.21
SSU72-201ENST00000291386 AFF4Q9UHB7 1163 aaKnown RBP28.85■■■□□ 2.21
SSU72-201ENST00000291386 LETM1O95202 739 aaPredicted RBP28.84■■■□□ 2.21
SSU72-201ENST00000291386 ATF2P15336 505 aa28.84■■■□□ 2.21
SSU72-201ENST00000291386 WARSP23381 471 aaKnown RBP28.84■■■□□ 2.21
SSU72-201ENST00000291386 ITIH3Q06033 890 aa28.84■■■□□ 2.21
SSU72-201ENST00000291386 SMAD4Q13485 552 aaKnown RBP28.84■■■□□ 2.21
SSU72-201ENST00000291386 UVSSAQ2YD98 709 aa28.84■■■□□ 2.21
SSU72-201ENST00000291386 CBWD6Q4V339 395 aa28.84■■■□□ 2.21
SSU72-201ENST00000291386 ZNF667Q5HYK9 610 aa28.84■■■□□ 2.21
SSU72-201ENST00000291386 CBWD3Q5JTY5 395 aa28.84■■■□□ 2.21
SSU72-201ENST00000291386 CBWD5Q5RIA9 395 aa28.84■■■□□ 2.21
SSU72-201ENST00000291386 IRF2BP1Q8IU81 584 aa28.84■■■□□ 2.21
SSU72-201ENST00000291386 FBXL13Q8NEE6 735 aa28.84■■■□□ 2.21
SSU72-201ENST00000291386 ENOX1Q8TC92 643 aaKnown RBP28.84■■■□□ 2.21
SSU72-201ENST00000291386 KBTBD7Q8WVZ9 684 aa28.84■■■□□ 2.21
SSU72-201ENST00000291386 ACBD6Q9BR61 282 aa28.84■■■□□ 2.21
SSU72-201ENST00000291386 RHOBTB2Q9BYZ6 727 aa28.84■■■□□ 2.21
SSU72-201ENST00000291386 ZCWPW1Q9H0M4 648 aa28.84■■■□□ 2.21
SSU72-201ENST00000291386 MMRN2Q9H8L6 949 aa28.84■■■□□ 2.21
SSU72-201ENST00000291386 SPATA31D3P0C874 917 aa28.83■■■□□ 2.21
SSU72-201ENST00000291386 MYL7Q01449 175 aa28.83■■■□□ 2.21
SSU72-201ENST00000291386 TPD52L1Q16890 204 aaPredicted RBP28.83■■■□□ 2.21
SSU72-201ENST00000291386 SPATA31D4Q6ZUB0 917 aa28.83■■■□□ 2.21
SSU72-201ENST00000291386 FAXDC2Q96IV6 333 aa28.83■■■□□ 2.21
SSU72-201ENST00000291386 ASB2Q96Q27 587 aa28.83■■■□□ 2.21
SSU72-201ENST00000291386 MMS19Q96T76 1030 aa28.83■■■□□ 2.21
SSU72-201ENST00000291386 ADAM7Q9H2U9 754 aa28.83■■■□□ 2.21
SSU72-201ENST00000291386 ZDHHC7Q9NXF8 308 aa28.83■■■□□ 2.21
SSU72-201ENST00000291386 P4HA2O15460 535 aa28.82■■■□□ 2.2
SSU72-201ENST00000291386 MBTPS2O43462 519 aa28.82■■■□□ 2.2
SSU72-201ENST00000291386 ZMYND10O75800 440 aa28.82■■■□□ 2.2
SSU72-201ENST00000291386 CPB1P15086 417 aa28.82■■■□□ 2.2
SSU72-201ENST00000291386 FMO5P49326 533 aa28.82■■■□□ 2.2
SSU72-201ENST00000291386 ARPP19P56211 112 aa28.82■■■□□ 2.2
SSU72-201ENST00000291386 TYRO3Q06418 890 aa28.82■■■□□ 2.2
SSU72-201ENST00000291386 SMARCB1Q12824 385 aa28.82■■■□□ 2.2
SSU72-201ENST00000291386 CYP26C1Q6V0L0 522 aa28.82■■■□□ 2.2
SSU72-201ENST00000291386 OSTM1Q86WC4 334 aa28.82■■■□□ 2.2
SSU72-201ENST00000291386 CNOT6LQ96LI5 555 aaKnown RBP28.82■■■□□ 2.2
SSU72-201ENST00000291386 IMPG2Q9BZV3 1241 aa28.82■■■□□ 2.2
SSU72-201ENST00000291386 RAB20Q9NX57 234 aa28.82■■■□□ 2.2
SSU72-201ENST00000291386 DDX43Q9NXZ2 648 aaKnown RBP28.82■■■□□ 2.2
SSU72-201ENST00000291386 NXF1Q9UBU9 619 aaKnown RBP28.82■■■□□ 2.2
SSU72-201ENST00000291386 N4BP1O75113 896 aaKnown RBP28.81■■■□□ 2.2
SSU72-201ENST00000291386 P4HA1P13674 534 aa28.81■■■□□ 2.2
SSU72-201ENST00000291386 HOXA9P31269 272 aa28.81■■■□□ 2.2
SSU72-201ENST00000291386 LIN9Q5TKA1 542 aa28.81■■■□□ 2.2
SSU72-201ENST00000291386 CCDC149Q6ZUS6 474 aa28.81■■■□□ 2.2
SSU72-201ENST00000291386 C11orf57Q6ZUT1 292 aaPredicted RBP28.81■■■□□ 2.2
SSU72-201ENST00000291386 FAM114A1Q8IWE2 563 aa28.81■■■□□ 2.2
SSU72-201ENST00000291386 TCEAL8Q8IYN2 117 aa28.81■■■□□ 2.2
SSU72-201ENST00000291386 TMEM209Q96SK2 561 aa28.81■■■□□ 2.2
SSU72-201ENST00000291386 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.81■■■□□ 2.2
SSU72-201ENST00000291386 GRXCR2A6NFK2 248 aa28.8■■■□□ 2.2
SSU72-201ENST00000291386 OR4Q2P0C623 313 aa28.8■■■□□ 2.2
SSU72-201ENST00000291386 PCSK1P29120 753 aa28.8■■■□□ 2.2
SSU72-201ENST00000291386 CLUL1Q15846 466 aa28.8■■■□□ 2.2
SSU72-201ENST00000291386 PTCRAQ6ISU1 281 aaPredicted RBP28.8■■■□□ 2.2
SSU72-201ENST00000291386 RNF19BQ6ZMZ0 732 aa28.8■■■□□ 2.2
SSU72-201ENST00000291386 DCP1BQ8IZD4 617 aaKnown RBP28.8■■■□□ 2.2
SSU72-201ENST00000291386 CCDC150Q8NCX0 1101 aa28.8■■■□□ 2.2
SSU72-201ENST00000291386 SUSD6Q92537 303 aa28.8■■■□□ 2.2
SSU72-201ENST00000291386 SEMA4DQ92854 862 aa28.8■■■□□ 2.2
SSU72-201ENST00000291386 HSFX1Q9UBD0 423 aa28.8■■■□□ 2.2
SSU72-201ENST00000291386 POLIQ9UNA4 740 aa28.8■■■□□ 2.2
SSU72-201ENST00000291386 FAM50BQ9Y247 325 aa28.8■■■□□ 2.2
SSU72-201ENST00000291386 C8AP07357 584 aa28.79■■■□□ 2.2
SSU72-201ENST00000291386 POU2F2P09086 479 aa28.79■■■□□ 2.2
SSU72-201ENST00000291386 HNRNPA1P09651 372 aaKnown RBP eCLIP28.79■■■□□ 2.2
SSU72-201ENST00000291386 ELF1P32519 619 aa28.79■■■□□ 2.2
SSU72-201ENST00000291386 NOP14P78316 857 aaKnown RBP28.79■■■□□ 2.2
SSU72-201ENST00000291386 KCNH2Q12809 1159 aa28.79■■■□□ 2.2
SSU72-201ENST00000291386 RARS2Q5T160 578 aaKnown RBP28.79■■■□□ 2.2
SSU72-201ENST00000291386 CES5AQ6NT32 575 aa28.79■■■□□ 2.2
SSU72-201ENST00000291386 GPR149Q86SP6 731 aa28.79■■■□□ 2.2
SSU72-201ENST00000291386 C12orf76Q8N812 135 aaPredicted RBP28.79■■■□□ 2.2
SSU72-201ENST00000291386 C2orf15Q8WU43 125 aaKnown RBP28.79■■■□□ 2.2
SSU72-201ENST00000291386 MRPL45Q9BRJ2 306 aaKnown RBP28.79■■■□□ 2.2
SSU72-201ENST00000291386 PI4K2AQ9BTU6 479 aa28.79■■■□□ 2.2
SSU72-201ENST00000291386 APOBEC3GQ9HC16 384 aaKnown RBP28.79■■■□□ 2.2
SSU72-201ENST00000291386 MTMR11A4FU01 709 aa28.78■■■□□ 2.2
SSU72-201ENST00000291386 SPDYE4A6NLX3 237 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms