RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 LRFN2Q9ULH4 789 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 ITGB4P16144 1822 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 CDK5RAP2Q96SN8 1893 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 IQANK1A0A1B0GTG1 560 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 MAPK13O15264 365 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 GYG2O15488 501 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 SUPT20HL2P0C7V6 817 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 KRT4P19013 534 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 GRIK1P39086 918 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 LAMTOR4Q0VGL1 99 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 PCNX4Q63HM2 1172 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 CES3Q6UWW8 571 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 C1orf186Q6ZWK4 172 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 PALB2Q86YC2 1186 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 GSDMBQ8TAX9 411 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 LNX1Q8TBB1 728 aaPredicted RBP5.03□□□□□ -1.6
UBR1-201ENST00000290650 PPWD1Q96BP3 646 aaKnown RBP5.03□□□□□ -1.6
UBR1-201ENST00000290650 TTC1Q99614 292 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 TRAIPQ9BWF2 469 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 KCNMB3Q9NPA1 279 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 CISHQ9NSE2 258 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 GTSE1Q9NYZ3 720 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 TLK1Q9UKI8 766 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 DGKIO75912 1065 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 CELF2O95319 508 aaKnown RBP5.03□□□□□ -1.6
UBR1-201ENST00000290650 ETFBP38117 255 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 HSPA9P38646 679 aaKnown RBP5.03□□□□□ -1.6
UBR1-201ENST00000290650 JAG1P78504 1218 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 ASPHQ12797 758 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 PLCB4Q15147 1175 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 LVRNQ6Q4G3 990 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 RSPH3Q86UC2 560 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 SCUBE3Q8IX30 993 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 BAP1Q92560 729 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 FAM167AQ96KS9 214 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 SLC24A3Q9HC58 644 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 CHST7Q9NS84 486 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 GAKO14976 1311 aa5.03□□□□□ -1.6
UBR1-201ENST00000290650 FAM187AA6NFU0 413 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 MYBL1P10243 752 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 ZNF157P51786 506 aaPredicted RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 CDR2Q01850 454 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 RRP1BQ14684 758 aaKnown RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 TTMPQ5BVD1 217 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 ISLR2Q6UXK2 745 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 DENND5BQ6ZUT9 1274 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 SLC25A41Q8N5S1 370 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 GCOM2Q9BZD3 368 aaPredicted RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 DNAJC18Q9H819 358 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 COL20A1Q9P218 1284 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 SCAMP3O14828 347 aaKnown RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 HSPA4LO95757 839 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 IRF1P10914 325 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 CDC25CP30307 473 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 GARSP41250 739 aaKnown RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 SGSM1Q2NKQ1 1148 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 ZBTB41Q5SVQ8 909 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 TREML2Q5T2D2 321 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 C9orf131Q5VYM1 1079 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 FAM161BQ96MY7 647 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 SPON2Q9BUD6 331 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 CDC42EP4Q9H3Q1 356 aaKnown RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 ANLNQ9NQW6 1124 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 SNTG2Q9NY99 539 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 NUDT5Q9UKK9 219 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 DIS3Q9Y2L1 958 aaKnown RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 PHRF1Q9P1Y6 1649 aaKnown RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 FAM237AA0A1B0GTK4 181 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 GOLGA8TH3BQL2 631 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 RBAK-RBAKDNI3L0D1 243 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 SYF2O95926 243 aaKnown RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 KRT7P08729 469 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 RBP3P10745 1247 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 TCN1P20061 433 aaPredicted RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 SURF1Q15526 300 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 NUDCD3Q8IVD9 361 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 ETNPPLQ8TBG4 499 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 KAT2BQ92831 832 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 EDEM3Q9BZQ6 932 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 SMARCAD1Q9H4L7 1026 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 A1CFQ9NQ94 594 aaKnown RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 AJAP1Q9UKB5 411 aaPredicted RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 MYH9P35579 1960 aaKnown RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 CASTOR2A6NHX0 329 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 XPOTO43592 962 aaKnown RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 STAG3L1P0CL83 205 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 RARAP10276 462 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 PMLP29590 882 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 ABCG1P45844 678 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 VGLL4Q14135 290 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 PTGISQ16647 500 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 WDR93Q6P2C0 686 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 NPNTQ6UXI9 565 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 ARMCX2Q7L311 632 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 NT5DC3Q86UY8 548 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 OR6P1Q8NGX9 317 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 XPO6Q96QU8 1125 aaKnown RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 C2orf40Q9H1Z8 148 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 CCDC68Q9H2F9 335 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 DPP3Q9NY33 737 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms